BLASTX nr result
ID: Coptis21_contig00023008
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023008 (650 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit... 293 2e-77 gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo] 293 2e-77 emb|CBI34215.3| unnamed protein product [Vitis vinifera] 293 2e-77 ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co... 292 4e-77 ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, par... 291 7e-77 >ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera] Length = 950 Score = 293 bits (750), Expect = 2e-77 Identities = 148/206 (71%), Positives = 161/206 (78%) Frame = -2 Query: 619 MGVPAFYRWLADRYPRSITDVIEEEEEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGIIH 440 MGVPAFYRWLADRYP ++ DV+EEE +G IDVS PNPN +EFD+ YLDMNGIIH Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEPS--EGGAE-IDVSRPNPNGMEFDNLYLDMNGIIH 57 Query: 439 PCFHPEGKPAPATYDEVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQXXXXXX 260 PCFHP+GKPAP TYD+VFKSIFDYIDHLFSLVRPR+LL+MAIDGVAPRAKMNQQ Sbjct: 58 PCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117 Query: 259 XXXXXXXXXXXXXXXXXXXEVEGKTLTCKEKPETSDSNVITPGTQFMAVLSVALQYYVHS 80 EVEGK L+ KEKPETSDSNVITPGT+FMAVLSVALQYY+HS Sbjct: 118 AAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHS 177 Query: 79 RLNRIPGWKGIKVILSDSNVPGEGEH 2 RLNR PGW KVILSDSNVPGEGEH Sbjct: 178 RLNRNPGWCSTKVILSDSNVPGEGEH 203 >gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo] Length = 934 Score = 293 bits (750), Expect = 2e-77 Identities = 149/207 (71%), Positives = 159/207 (76%), Gaps = 1/207 (0%) Frame = -2 Query: 619 MGVPAFYRWLADRYPRSITDVIEEEE-EILDGVLSVIDVSNPNPNNVEFDHFYLDMNGII 443 MGVPAFYRWLADRYPRSI DV+EEE + +GVL IDVS PNPN +EFD+ YLDMNGII Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPLDGPNGVLLPIDVSKPNPNGMEFDNLYLDMNGII 60 Query: 442 HPCFHPEGKPAPATYDEVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQXXXXX 263 HPCFHPEGKP PATYD VFKSIFDYIDHLFSLVRPRK+L+MAIDGVAPRAKMNQQ Sbjct: 61 HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120 Query: 262 XXXXXXXXXXXXXXXXXXXXEVEGKTLTCKEKPETSDSNVITPGTQFMAVLSVALQYYVH 83 E EG+TL KEKPET DSNVITPGT+FM VLSVALQYY Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQ 180 Query: 82 SRLNRIPGWKGIKVILSDSNVPGEGEH 2 SRLN PGW+ KVILSDSNVPGEGEH Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEH 207 >emb|CBI34215.3| unnamed protein product [Vitis vinifera] Length = 1083 Score = 293 bits (750), Expect = 2e-77 Identities = 148/206 (71%), Positives = 161/206 (78%) Frame = -2 Query: 619 MGVPAFYRWLADRYPRSITDVIEEEEEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGIIH 440 MGVPAFYRWLADRYP ++ DV+EEE +G IDVS PNPN +EFD+ YLDMNGIIH Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEPS--EGGAE-IDVSRPNPNGMEFDNLYLDMNGIIH 57 Query: 439 PCFHPEGKPAPATYDEVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQXXXXXX 260 PCFHP+GKPAP TYD+VFKSIFDYIDHLFSLVRPR+LL+MAIDGVAPRAKMNQQ Sbjct: 58 PCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117 Query: 259 XXXXXXXXXXXXXXXXXXXEVEGKTLTCKEKPETSDSNVITPGTQFMAVLSVALQYYVHS 80 EVEGK L+ KEKPETSDSNVITPGT+FMAVLSVALQYY+HS Sbjct: 118 AAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHS 177 Query: 79 RLNRIPGWKGIKVILSDSNVPGEGEH 2 RLNR PGW KVILSDSNVPGEGEH Sbjct: 178 RLNRNPGWCSTKVILSDSNVPGEGEH 203 >ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis] gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease, putative [Ricinus communis] Length = 964 Score = 292 bits (747), Expect = 4e-77 Identities = 146/207 (70%), Positives = 159/207 (76%), Gaps = 1/207 (0%) Frame = -2 Query: 619 MGVPAFYRWLADRYPRSITDVIEEE-EEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGII 443 MGVPAFYRWLADRYP +I DV+EEE +E +GV+ ID+S PNPN +EFD+ YLDMNGII Sbjct: 1 MGVPAFYRWLADRYPLAIVDVVEEEPKEDSNGVIGPIDISKPNPNGLEFDNLYLDMNGII 60 Query: 442 HPCFHPEGKPAPATYDEVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQXXXXX 263 HPCFHP+GKP P TYD+VFKSIFDYIDHLF+LVRPRKLLFMAIDGVAPRAKMNQQ Sbjct: 61 HPCFHPDGKPPPPTYDDVFKSIFDYIDHLFTLVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120 Query: 262 XXXXXXXXXXXXXXXXXXXXEVEGKTLTCKEKPETSDSNVITPGTQFMAVLSVALQYYVH 83 E EGK L+ KEKPETSDSNVITPGTQFMAVLS LQYYV Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGKLLSPKEKPETSDSNVITPGTQFMAVLSTGLQYYVQ 180 Query: 82 SRLNRIPGWKGIKVILSDSNVPGEGEH 2 RLN PGWK KVILSD+NVPGEGEH Sbjct: 181 MRLNHNPGWKYTKVILSDANVPGEGEH 207 >ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus] Length = 254 Score = 291 bits (745), Expect = 7e-77 Identities = 149/207 (71%), Positives = 157/207 (75%), Gaps = 1/207 (0%) Frame = -2 Query: 619 MGVPAFYRWLADRYPRSITDVIEEEEEI-LDGVLSVIDVSNPNPNNVEFDHFYLDMNGII 443 MGVPAFYRWLADRYPRSI DV+EEE GVL IDVS PNPN +EFD+ YLDMNGII Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60 Query: 442 HPCFHPEGKPAPATYDEVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQXXXXX 263 HPCFHPEGKP PATYD VFKSIFDYIDHLFSLVRPRK+L+MAIDGVAPRAKMNQQ Sbjct: 61 HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120 Query: 262 XXXXXXXXXXXXXXXXXXXXEVEGKTLTCKEKPETSDSNVITPGTQFMAVLSVALQYYVH 83 E EG+TL KEKPET DSNVITPGT+FM VLSVALQYY Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQ 180 Query: 82 SRLNRIPGWKGIKVILSDSNVPGEGEH 2 SRLN PGW+ KVILSDSNVPGEGEH Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEH 207