BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023008
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   293   2e-77
gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]       293   2e-77
emb|CBI34215.3| unnamed protein product [Vitis vinifera]              293   2e-77
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co...   292   4e-77
ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, par...   291   7e-77

>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score =  293 bits (750), Expect = 2e-77
 Identities = 148/206 (71%), Positives = 161/206 (78%)
 Frame = -2

Query: 619 MGVPAFYRWLADRYPRSITDVIEEEEEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGIIH 440
           MGVPAFYRWLADRYP ++ DV+EEE    +G    IDVS PNPN +EFD+ YLDMNGIIH
Sbjct: 1   MGVPAFYRWLADRYPLAVMDVVEEEPS--EGGAE-IDVSRPNPNGMEFDNLYLDMNGIIH 57

Query: 439 PCFHPEGKPAPATYDEVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQXXXXXX 260
           PCFHP+GKPAP TYD+VFKSIFDYIDHLFSLVRPR+LL+MAIDGVAPRAKMNQQ      
Sbjct: 58  PCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117

Query: 259 XXXXXXXXXXXXXXXXXXXEVEGKTLTCKEKPETSDSNVITPGTQFMAVLSVALQYYVHS 80
                              EVEGK L+ KEKPETSDSNVITPGT+FMAVLSVALQYY+HS
Sbjct: 118 AAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHS 177

Query: 79  RLNRIPGWKGIKVILSDSNVPGEGEH 2
           RLNR PGW   KVILSDSNVPGEGEH
Sbjct: 178 RLNRNPGWCSTKVILSDSNVPGEGEH 203


>gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
          Length = 934

 Score =  293 bits (750), Expect = 2e-77
 Identities = 149/207 (71%), Positives = 159/207 (76%), Gaps = 1/207 (0%)
 Frame = -2

Query: 619 MGVPAFYRWLADRYPRSITDVIEEEE-EILDGVLSVIDVSNPNPNNVEFDHFYLDMNGII 443
           MGVPAFYRWLADRYPRSI DV+EEE  +  +GVL  IDVS PNPN +EFD+ YLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPLDGPNGVLLPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 442 HPCFHPEGKPAPATYDEVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQXXXXX 263
           HPCFHPEGKP PATYD VFKSIFDYIDHLFSLVRPRK+L+MAIDGVAPRAKMNQQ     
Sbjct: 61  HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120

Query: 262 XXXXXXXXXXXXXXXXXXXXEVEGKTLTCKEKPETSDSNVITPGTQFMAVLSVALQYYVH 83
                               E EG+TL  KEKPET DSNVITPGT+FM VLSVALQYY  
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQ 180

Query: 82  SRLNRIPGWKGIKVILSDSNVPGEGEH 2
           SRLN  PGW+  KVILSDSNVPGEGEH
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEH 207


>emb|CBI34215.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  293 bits (750), Expect = 2e-77
 Identities = 148/206 (71%), Positives = 161/206 (78%)
 Frame = -2

Query: 619 MGVPAFYRWLADRYPRSITDVIEEEEEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGIIH 440
           MGVPAFYRWLADRYP ++ DV+EEE    +G    IDVS PNPN +EFD+ YLDMNGIIH
Sbjct: 1   MGVPAFYRWLADRYPLAVMDVVEEEPS--EGGAE-IDVSRPNPNGMEFDNLYLDMNGIIH 57

Query: 439 PCFHPEGKPAPATYDEVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQXXXXXX 260
           PCFHP+GKPAP TYD+VFKSIFDYIDHLFSLVRPR+LL+MAIDGVAPRAKMNQQ      
Sbjct: 58  PCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117

Query: 259 XXXXXXXXXXXXXXXXXXXEVEGKTLTCKEKPETSDSNVITPGTQFMAVLSVALQYYVHS 80
                              EVEGK L+ KEKPETSDSNVITPGT+FMAVLSVALQYY+HS
Sbjct: 118 AAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHS 177

Query: 79  RLNRIPGWKGIKVILSDSNVPGEGEH 2
           RLNR PGW   KVILSDSNVPGEGEH
Sbjct: 178 RLNRNPGWCSTKVILSDSNVPGEGEH 203


>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
           gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
           putative [Ricinus communis]
          Length = 964

 Score =  292 bits (747), Expect = 4e-77
 Identities = 146/207 (70%), Positives = 159/207 (76%), Gaps = 1/207 (0%)
 Frame = -2

Query: 619 MGVPAFYRWLADRYPRSITDVIEEE-EEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGII 443
           MGVPAFYRWLADRYP +I DV+EEE +E  +GV+  ID+S PNPN +EFD+ YLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPLAIVDVVEEEPKEDSNGVIGPIDISKPNPNGLEFDNLYLDMNGII 60

Query: 442 HPCFHPEGKPAPATYDEVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQXXXXX 263
           HPCFHP+GKP P TYD+VFKSIFDYIDHLF+LVRPRKLLFMAIDGVAPRAKMNQQ     
Sbjct: 61  HPCFHPDGKPPPPTYDDVFKSIFDYIDHLFTLVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120

Query: 262 XXXXXXXXXXXXXXXXXXXXEVEGKTLTCKEKPETSDSNVITPGTQFMAVLSVALQYYVH 83
                               E EGK L+ KEKPETSDSNVITPGTQFMAVLS  LQYYV 
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGKLLSPKEKPETSDSNVITPGTQFMAVLSTGLQYYVQ 180

Query: 82  SRLNRIPGWKGIKVILSDSNVPGEGEH 2
            RLN  PGWK  KVILSD+NVPGEGEH
Sbjct: 181 MRLNHNPGWKYTKVILSDANVPGEGEH 207


>ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
          Length = 254

 Score =  291 bits (745), Expect = 7e-77
 Identities = 149/207 (71%), Positives = 157/207 (75%), Gaps = 1/207 (0%)
 Frame = -2

Query: 619 MGVPAFYRWLADRYPRSITDVIEEEEEI-LDGVLSVIDVSNPNPNNVEFDHFYLDMNGII 443
           MGVPAFYRWLADRYPRSI DV+EEE      GVL  IDVS PNPN +EFD+ YLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 442 HPCFHPEGKPAPATYDEVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQXXXXX 263
           HPCFHPEGKP PATYD VFKSIFDYIDHLFSLVRPRK+L+MAIDGVAPRAKMNQQ     
Sbjct: 61  HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120

Query: 262 XXXXXXXXXXXXXXXXXXXXEVEGKTLTCKEKPETSDSNVITPGTQFMAVLSVALQYYVH 83
                               E EG+TL  KEKPET DSNVITPGT+FM VLSVALQYY  
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLPKEKPETCDSNVITPGTEFMGVLSVALQYYAQ 180

Query: 82  SRLNRIPGWKGIKVILSDSNVPGEGEH 2
           SRLN  PGW+  KVILSDSNVPGEGEH
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEH 207