BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022940
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   311   2e-82
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]     311   2e-82
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   310   4e-82
gb|ABW74566.1| integrase [Boechera divaricarpa]                       308   2e-81
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   306   5e-81

>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  311 bits (797), Expect = 2e-82
 Identities = 149/270 (55%), Positives = 196/270 (72%)
 Frame = -3

Query: 979  EGIFISQEKYADDILKRFCVTNCKPIATPMMANETFSKYDGATKADASLYRSLVGSLIYL 800
            +G+F+SQ KYA D+LK+F + NCK +ATPM +NE     DG  +ADA  +RSLVG LIYL
Sbjct: 999  DGVFVSQRKYAVDLLKKFNMLNCKVVATPMNSNEKLQAEDGTERADARRFRSLVGGLIYL 1058

Query: 799  TNTRPDIVHAVSILSRFMNVPSNNHYEAAKRILRYVNSTKTCGLFYRKEEDNHLYGYTDS 620
            T+TRPDI  AV ++SRFM+ PS  H  AAKR+LRY+  T   G++Y   ++  L GYTDS
Sbjct: 1059 THTRPDIAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYTDS 1118

Query: 619  DWAGSIDDRKSTSGYVFCLGTKMMITWSSKKQCTVALSSAEAEYISATSAACEAVWLRRI 440
            DWAG ++DRKS SGY+F LG+   + WSSKKQ   ALSS EAEY +ATS+ C+AVWLRRI
Sbjct: 1119 DWAGCLEDRKSXSGYMFSLGSG-AVCWSSKKQAVTALSSXEAEYTAATSSXCQAVWLRRI 1177

Query: 439  LKDLQQKQEAPTTVFCDNMSTIAMTKNPVFHSRSKHIELRHHFIRELVARGDIDLQFCKT 260
            L D+ Q+ E PT ++CDN + IAMTKNP +H R+KH+++R HFIR+LV  G + LQ+C T
Sbjct: 1178 LADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNT 1237

Query: 259  DEQLADGFTKAIPPEKFKKFRNHLQITN*E 170
            +EQ+AD  TKA+  +K   FR+ L + N E
Sbjct: 1238 NEQVADVLTKALSRDKHVYFRSKLGVCNFE 1267


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score =  311 bits (797), Expect = 2e-82
 Identities = 149/257 (57%), Positives = 199/257 (77%)
 Frame = -3

Query: 979  EGIFISQEKYADDILKRFCVTNCKPIATPMMANETFSKYDGATKADASLYRSLVGSLIYL 800
            EGIFISQ KYA++ILK+F + NCK + TP++ NE     DGA KAD ++YRSLVGSL+YL
Sbjct: 869  EGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYL 928

Query: 799  TNTRPDIVHAVSILSRFMNVPSNNHYEAAKRILRYVNSTKTCGLFYRKEEDNHLYGYTDS 620
            T TRPDI+ A S+LSR+M+ PS  ++ AAKR+LRY+  T   G++Y+  +++ L GYTDS
Sbjct: 929  TATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTAYYGIWYKPVKESKLIGYTDS 988

Query: 619  DWAGSIDDRKSTSGYVFCLGTKMMITWSSKKQCTVALSSAEAEYISATSAACEAVWLRRI 440
            DWAG +DD KSTSGY F LG+ M  +WS+KKQ  VALSSAEAEY++A+ A  + VWLRRI
Sbjct: 989  DWAGCLDDMKSTSGYAFSLGSGMW-SWSTKKQNIVALSSAEAEYVAASKAVSQVVWLRRI 1047

Query: 439  LKDLQQKQEAPTTVFCDNMSTIAMTKNPVFHSRSKHIELRHHFIRELVARGDIDLQFCKT 260
            ++DL +KQ  PTT++CD+ S IA+ +NPV H R+KHI +++H+IRE V R ++ L+FC+T
Sbjct: 1048 MEDLGEKQYQPTTIYCDSKSAIAINENPVSHDRTKHIAIKYHYIREAVDRQEVKLEFCRT 1107

Query: 259  DEQLADGFTKAIPPEKF 209
            DEQLAD FTKA+  EKF
Sbjct: 1108 DEQLADIFTKALSKEKF 1124


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  310 bits (793), Expect = 4e-82
 Identities = 148/261 (56%), Positives = 200/261 (76%)
 Frame = -3

Query: 979  EGIFISQEKYADDILKRFCVTNCKPIATPMMANETFSKYDGATKADASLYRSLVGSLIYL 800
            EGIFISQ KYA++ILK+F + NCK + TP++ NE     DGA K D ++YRSLVGSL+YL
Sbjct: 875  EGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKVDPTIYRSLVGSLLYL 934

Query: 799  TNTRPDIVHAVSILSRFMNVPSNNHYEAAKRILRYVNSTKTCGLFYRKEEDNHLYGYTDS 620
            T TRPDI+ A S+LSR+M+ PS  ++ AAKR+LRY+  T   G++Y+  +++ L GYTDS
Sbjct: 935  TATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTDS 994

Query: 619  DWAGSIDDRKSTSGYVFCLGTKMMITWSSKKQCTVALSSAEAEYISATSAACEAVWLRRI 440
            DWAG +DD K TSGY F LG+  M +WS+KKQ  VALSSAEAEY++A+ A  + VWLRRI
Sbjct: 995  DWAGCLDDMKGTSGYAFSLGSG-MCSWSTKKQNIVALSSAEAEYVAASKAVSQVVWLRRI 1053

Query: 439  LKDLQQKQEAPTTVFCDNMSTIAMTKNPVFHSRSKHIELRHHFIRELVARGDIDLQFCKT 260
            ++DL +KQ  PTT++CD+ S IA+++NPV H R+KHI +++H+IRE V R ++ L+FC+T
Sbjct: 1054 MEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHYIREAVDRQEVKLEFCRT 1113

Query: 259  DEQLADGFTKAIPPEKFKKFR 197
            DEQLAD FTKA+  EKF + R
Sbjct: 1114 DEQLADIFTKALSKEKFVRDR 1134


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  308 bits (788), Expect = 2e-81
 Identities = 152/272 (55%), Positives = 195/272 (71%)
 Frame = -3

Query: 979  EGIFISQEKYADDILKRFCVTNCKPIATPMMANETFSKYDGATKADASLYRSLVGSLIYL 800
            +G+F+SQ KYA D+LKRF +  C  + TPM  NE     DG  KADA+ +RSLVG LIYL
Sbjct: 890  DGVFVSQHKYACDLLKRFDMAGCNAVETPMNVNEKLLAGDGTEKADATKFRSLVGGLIYL 949

Query: 799  TNTRPDIVHAVSILSRFMNVPSNNHYEAAKRILRYVNSTKTCGLFYRKEEDNHLYGYTDS 620
            T+TRPDI  AVS +SRFM+ P+  H+ AAKR+LRY+  T   GL+Y       L G+TDS
Sbjct: 950  THTRPDICFAVSAISRFMHGPTKQHFGAAKRLLRYIARTAEYGLWYCSVSKFKLVGFTDS 1009

Query: 619  DWAGSIDDRKSTSGYVFCLGTKMMITWSSKKQCTVALSSAEAEYISATSAACEAVWLRRI 440
            DWAG + DRKSTSG+VF LG+   + WSSKKQ   ALSS+EAEY +AT+AAC+AVWLRRI
Sbjct: 1010 DWAGCVQDRKSTSGHVFNLGSG-AVCWSSKKQNVTALSSSEAEYTAATAAACQAVWLRRI 1068

Query: 439  LKDLQQKQEAPTTVFCDNMSTIAMTKNPVFHSRSKHIELRHHFIRELVARGDIDLQFCKT 260
            L D++Q+QE  TT+FCDN +TIAM KNP +H R+KHI ++ HFIR+LV+ G + L++C T
Sbjct: 1069 LADIKQEQEKATTIFCDNKATIAMNKNPAYHGRTKHISIKVHFIRDLVSEGSVTLEYCST 1128

Query: 259  DEQLADGFTKAIPPEKFKKFRNHLQITN*EGM 164
            +EQ AD  TKA+   KF  FR+ L +   E M
Sbjct: 1129 NEQSADVLTKALSRNKFDYFRSKLGVCKFESM 1160


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  306 bits (784), Expect = 5e-81
 Identities = 148/270 (54%), Positives = 196/270 (72%)
 Frame = -3

Query: 979  EGIFISQEKYADDILKRFCVTNCKPIATPMMANETFSKYDGATKADASLYRSLVGSLIYL 800
            +G+F+SQ KYA D+LK+F + NCK +ATPM +NE     DG  +ADA  +RSLVG LIYL
Sbjct: 908  DGVFVSQRKYAVDLLKKFNMLNCKVVATPMNSNEKLQAEDGTERADARRFRSLVGGLIYL 967

Query: 799  TNTRPDIVHAVSILSRFMNVPSNNHYEAAKRILRYVNSTKTCGLFYRKEEDNHLYGYTDS 620
            T+TRPD   AV ++SRFM+ PS  H  AAKR+LRY+  T    ++Y   ++  L GYTDS
Sbjct: 968  THTRPDXAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFRIWYGHVQEFKLVGYTDS 1027

Query: 619  DWAGSIDDRKSTSGYVFCLGTKMMITWSSKKQCTVALSSAEAEYISATSAACEAVWLRRI 440
            DWAG ++DRKSTSGY+F LG+   + WSSKKQ   ALSS+EAEY +ATS+AC+AVWLRRI
Sbjct: 1028 DWAGCLEDRKSTSGYMFSLGSG-AVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRRI 1086

Query: 439  LKDLQQKQEAPTTVFCDNMSTIAMTKNPVFHSRSKHIELRHHFIRELVARGDIDLQFCKT 260
            L D+ Q+ E  T ++CDN + IAMTKNP +H R+KH+++R HFIR+LV  G + LQ+C T
Sbjct: 1087 LVDINQEHEEXTVIYCDNKAAIAMTKNPAYHGRTKHVBIRVHFIRDLVVEGXVVLQYCNT 1146

Query: 259  DEQLADGFTKAIPPEKFKKFRNHLQITN*E 170
            +EQ+AD  TKA+  +K   FR+ L + N E
Sbjct: 1147 NEQVADVRTKALSRDKHVYFRSKLGVCNFE 1176