BLASTX nr result

ID: Coptis21_contig00022910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022910
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30461.3| unnamed protein product [Vitis vinifera]              126   3e-27
ref|XP_002273340.1| PREDICTED: uncharacterized protein LOC100245...   126   3e-27
ref|XP_002534178.1| hypothetical protein RCOM_0303160 [Ricinus c...   108   7e-22
ref|XP_002322936.1| predicted protein [Populus trichocarpa] gi|2...    92   7e-17
ref|XP_002308193.1| predicted protein [Populus trichocarpa] gi|2...    86   8e-15

>emb|CBI30461.3| unnamed protein product [Vitis vinifera]
          Length = 855

 Score =  126 bits (317), Expect = 3e-27
 Identities = 67/121 (55%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
 Frame = -2

Query: 363 MGYQADLRKHSRCPQTSRTVTEKISSTRAAQIVRFQDQLKLEKPISKSYGDLHHEIKQTL 184
           MGY  +L+  SR  QTS+ V EK  S +A Q ++FQD+ K+E  I    GDLH  ++Q +
Sbjct: 1   MGYSLELKSSSRQHQTSKIVKEKFQSPQANQSLKFQDKFKVENSI----GDLHTIVRQNV 56

Query: 183 GDGPLFPRKSPRNCQKQSVERQS-KDDELVKHMSNLPRYLQRVERGENPQEKVLNFGVLD 7
            +G LF RK     QKQ   R++ KDDELVKHMSNLP YLQR+E+GEN QEK LNFGVLD
Sbjct: 57  NEGSLFQRKFSAGHQKQHTSRKATKDDELVKHMSNLPGYLQRIEKGENLQEKALNFGVLD 116

Query: 6   W 4
           W
Sbjct: 117 W 117


>ref|XP_002273340.1| PREDICTED: uncharacterized protein LOC100245981 [Vitis vinifera]
          Length = 897

 Score =  126 bits (317), Expect = 3e-27
 Identities = 67/121 (55%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
 Frame = -2

Query: 363 MGYQADLRKHSRCPQTSRTVTEKISSTRAAQIVRFQDQLKLEKPISKSYGDLHHEIKQTL 184
           MGY  +L+  SR  QTS+ V EK  S +A Q ++FQD+ K+E  I    GDLH  ++Q +
Sbjct: 1   MGYSLELKSSSRQHQTSKIVKEKFQSPQANQSLKFQDKFKVENSI----GDLHTIVRQNV 56

Query: 183 GDGPLFPRKSPRNCQKQSVERQS-KDDELVKHMSNLPRYLQRVERGENPQEKVLNFGVLD 7
            +G LF RK     QKQ   R++ KDDELVKHMSNLP YLQR+E+GEN QEK LNFGVLD
Sbjct: 57  NEGSLFQRKFSAGHQKQHTSRKATKDDELVKHMSNLPGYLQRIEKGENLQEKALNFGVLD 116

Query: 6   W 4
           W
Sbjct: 117 W 117


>ref|XP_002534178.1| hypothetical protein RCOM_0303160 [Ricinus communis]
           gi|223525738|gb|EEF28202.1| hypothetical protein
           RCOM_0303160 [Ricinus communis]
          Length = 937

 Score =  108 bits (271), Expect = 7e-22
 Identities = 59/122 (48%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
 Frame = -2

Query: 363 MGYQADLRKHSRCPQTSRTVTEKISSTRAAQIVRFQDQLKLEKPISKSYGDLHHEIKQTL 184
           MG   D++K S+  Q S+ V E +  T+A Q ++ QD LK +  ISK Y  +  E+KQ  
Sbjct: 17  MGVGVDMKKSSKQQQYSKAVKETVLPTQAMQSLKHQDMLKAKGYISKPYSGVPCELKQNP 76

Query: 183 GDGPLFPRKSPRNCQKQSVE-RQSKDDELVKHMSNLPRYLQRVERGENPQEKVLNFGVLD 7
            +G L   K   NCQ+ +V  + SKDDELVK+MS+LP YLQR+E+ EN Q+K LN GVLD
Sbjct: 77  NNGTLIQPKPSGNCQQLAVMVKASKDDELVKYMSSLPHYLQRMEKTENIQDKALNVGVLD 136

Query: 6   WG 1
           WG
Sbjct: 137 WG 138


>ref|XP_002322936.1| predicted protein [Populus trichocarpa] gi|222867566|gb|EEF04697.1|
           predicted protein [Populus trichocarpa]
          Length = 1005

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 55/135 (40%), Positives = 81/135 (60%), Gaps = 2/135 (1%)
 Frame = -2

Query: 402 LQSDVGCMHSVRHMGYQADLRKHSRCPQTSRTVTEKISSTRAAQIVRFQDQLKLEKPISK 223
           ++S   C       G+  DL+K SR  + SR V +    T+A Q ++ QD+LK E   S+
Sbjct: 5   VKSSRACSEPSSERGFGLDLKKSSRWQKHSRIVKDTALPTQARQSLKHQDKLKAEYYDSQ 64

Query: 222 SYGDLHHEIKQTLGDG-PLFPRKSPRNCQKQSVE-RQSKDDELVKHMSNLPRYLQRVERG 49
             GD+ HE++    D   + P+ S ++ Q  S + +  KDDELVK+MS+LP YLQR++R 
Sbjct: 65  PCGDVPHELRLHANDRISVQPKTSLKHHQLHSDKIKARKDDELVKYMSDLPGYLQRMQRS 124

Query: 48  ENPQEKVLNFGVLDW 4
           E+ Q+K LN GVLDW
Sbjct: 125 ESIQDKALNVGVLDW 139


>ref|XP_002308193.1| predicted protein [Populus trichocarpa] gi|222854169|gb|EEE91716.1|
           predicted protein [Populus trichocarpa]
          Length = 979

 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 57/135 (42%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
 Frame = -2

Query: 402 LQSDVGCMHSVRHMGYQADLRKHSRCPQTSRTVTEKISSTRAAQIVRFQDQLKLEKPISK 223
           ++S   C       G+  +L+K SR  Q   T       T+A Q ++ QD+LK +   S+
Sbjct: 10  VKSSRTCSEPSSERGFGLELKKSSRWQQHLDTALP----TQAMQSLKHQDKLKAKYYGSQ 65

Query: 222 SYGDLHHEIKQTLGDGPLF-PRKSPRNCQKQSVERQS-KDDELVKHMSNLPRYLQRVERG 49
              D+  E+K    D  L  P+ S  N Q  SV+R S KDDELVK+MS+LP YLQR+ER 
Sbjct: 66  RCVDMPRELKLHANDRILVQPKTSGNNHQLHSVKRNSRKDDELVKYMSDLPGYLQRMERS 125

Query: 48  ENPQEKVLNFGVLDW 4
           E+ Q+K LN GVLDW
Sbjct: 126 ESIQDKALNVGVLDW 140


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