BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022689
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containi...   253   1e-65
ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containi...   253   1e-65
ref|XP_003617758.1| Pentatricopeptide repeat-containing protein ...   250   1e-64
ref|XP_002516925.1| pentatricopeptide repeat-containing protein,...   241   4e-62
ref|XP_002882500.1| pentatricopeptide repeat-containing protein ...   241   7e-62

>ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  253 bits (647), Expect = 1e-65
 Identities = 126/183 (68%), Positives = 152/183 (83%)
 Frame = +3

Query: 6   KLHSPGAYDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAF 185
           K+H P AY+ LL +MAR   FD+LER+LEEMSL+G+  S+N  IELV  CV S++L++AF
Sbjct: 121 KVHCPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAF 180

Query: 186 NLIQSIRKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVF 365
           ++IQ++RKFKFRPAFSAYT LIGA + V EP   L LF QMQELGYEVN+ LFTTLIRVF
Sbjct: 181 DIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVF 240

Query: 366 AKEGQVDAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDD 545
           A+EG+VDAAL+LLDE+KS++  AD VLYNVCIDCFGK GKVDM+WKFFHEMK+  L PDD
Sbjct: 241 AREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDD 300

Query: 546 VTY 554
           VTY
Sbjct: 301 VTY 303



 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 42/165 (25%), Positives = 71/165 (43%)
 Frame = +3

Query: 27   YDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAFNLIQSIR 206
            Y  L+    +    D    ++EE+   G   +  T   L+   V ++ + +A    QS++
Sbjct: 687  YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMK 746

Query: 207  KFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQVD 386
              K  P    Y+ LI     V +   A   +Q+MQ+LG + N   +TT+I   AK G + 
Sbjct: 747  DLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNIL 806

Query: 387  AALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMK 521
             A  L    K++  + D+  YN  I+      K   A+  F E +
Sbjct: 807  EASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETR 851



 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 4/180 (2%)
 Frame = +3

Query: 27  YDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVN----SQRLKDAFNLI 194
           +  L+++ AR    D    +L+EM     D      I L  +C++    + ++  ++   
Sbjct: 233 FTTLIRVFAREGRVDAALSLLDEMKSNSLDAD----IVLYNVCIDCFGKAGKVDMSWKFF 288

Query: 195 QSIRKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKE 374
             ++     P    YT++IG     +    A+ LF+Q+++         + T+I  +   
Sbjct: 289 HEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSA 348

Query: 375 GQVDAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDDVTY 554
           G+ D A  LL+  K+   +   + YN  + C GK  +V+ A + F EMK   + P+  TY
Sbjct: 349 GKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTY 407



 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 31/107 (28%), Positives = 55/107 (51%)
 Frame = +3

Query: 234 AYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDEV 413
           AY  +I       +   A  L ++M+  G+   +  + ++I   AK  ++D A  L +E 
Sbjct: 616 AYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 675

Query: 414 KSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDDVTY 554
           KS+    + V+Y+  ID FGKVG++D A+    E+  + L P+  T+
Sbjct: 676 KSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 722


>ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  253 bits (646), Expect = 1e-65
 Identities = 123/183 (67%), Positives = 154/183 (84%)
 Frame = +3

Query: 6   KLHSPGAYDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAF 185
           +LHSP AY+ LL LMAR +  + LE++LEEMS+AG+  SNNTCIE+V   V S++L++AF
Sbjct: 128 QLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAF 187

Query: 186 NLIQSIRKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVF 365
            +I+++RKFKFRPA+SAYTTLIGA +  HE    LTL +QMQE+GYEV + LFTTLI VF
Sbjct: 188 GVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVF 247

Query: 366 AKEGQVDAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDD 545
           A+EG+VDAAL+LLDE+KS++F AD VLYNVCIDCFGKVGKVDMAWKFFHE+K+Q L PDD
Sbjct: 248 AREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDD 307

Query: 546 VTY 554
           VT+
Sbjct: 308 VTF 310



 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 43/177 (24%), Positives = 82/177 (46%)
 Frame = +3

Query: 24  AYDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAFNLIQSI 203
           +Y++L+ ++ +    +   +V + M  AG   +  T   ++     +QRL +A ++   +
Sbjct: 413 SYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGL 472

Query: 204 RKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQV 383
                 P    + +LI       +   A  L+++M + G   N  ++T+LIR F K G+ 
Sbjct: 473 DHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRK 532

Query: 384 DAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDDVTY 554
           +    +  E+       D +L N  +DC  K G+++     F E+KAQ L PD  +Y
Sbjct: 533 EDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSY 589



 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 40/165 (24%), Positives = 70/165 (42%)
 Frame = +3

Query: 27   YDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAFNLIQSIR 206
            Y  L+    +    D    +LEE+   G   +  T   L+   V ++ + +A    Q+++
Sbjct: 694  YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMK 753

Query: 207  KFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQVD 386
              K  P    Y+ ++     V +   A   +Q+MQ+ G + N   +TT+I   A+ G V 
Sbjct: 754  NLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVL 813

Query: 387  AALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMK 521
             A  L +  KS   + D+  YN  I+      K   A+  F E +
Sbjct: 814  EAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETR 858



 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 35/127 (27%), Positives = 62/127 (48%)
 Frame = +3

Query: 174 KDAFNLIQSIRKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTL 353
           KD + L   +++        AY  +I       +   A  L ++M+  G +  +  + ++
Sbjct: 603 KDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSV 662

Query: 354 IRVFAKEGQVDAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRL 533
           I   AK  ++D A  L +E KS A   + V+Y+  ID FGKVG++D A+    E+  + L
Sbjct: 663 IDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGL 722

Query: 534 APDDVTY 554
            P+  T+
Sbjct: 723 TPNTYTW 729



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/177 (22%), Positives = 78/177 (44%)
 Frame = +3

Query: 24   AYDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAFNLIQSI 203
            AY++++    +    +   ++LEEM   G   +  T   ++       RL +A+ L +  
Sbjct: 623  AYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 682

Query: 204  RKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQV 383
            +          Y++LI     V     A  + +++ + G   N   +  L+    K  ++
Sbjct: 683  KSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEI 742

Query: 384  DAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDDVTY 554
            D AL     +K+     + V Y++ ++   KV K + A+ F+ EM+ Q L P+ +TY
Sbjct: 743  DEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITY 799


>ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519093|gb|AET00717.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  250 bits (638), Expect = 1e-64
 Identities = 120/181 (66%), Positives = 146/181 (80%)
 Frame = +3

Query: 12  HSPGAYDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAFNL 191
           H P  Y+  L +MAR +  D LE++LEEMS+AG+  SN+  +ELV   V S +LK+AF +
Sbjct: 131 HCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGV 190

Query: 192 IQSIRKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAK 371
           I+ +RKFKFRPAFSAYTTLIGA +  + P   LTLF QMQE+GYE N+ LFTTL+RVFA+
Sbjct: 191 IEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAR 250

Query: 372 EGQVDAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDDVT 551
           EG++DAAL+LLDE+KS++F AD VLYNVCIDCFGKVGKVDMAWKFFHEMKAQ L PDDVT
Sbjct: 251 EGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVT 310

Query: 552 Y 554
           Y
Sbjct: 311 Y 311



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 42/165 (25%), Positives = 72/165 (43%)
 Frame = +3

Query: 27   YDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAFNLIQSIR 206
            Y  L+    +    D    +LEE+   G   ++ T   L+   V ++ + +A    Q+++
Sbjct: 695  YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMK 754

Query: 207  KFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQVD 386
              K  P    Y+ +I    ++ +   A   +Q+MQ+ G + N   +TT+I   AK G V 
Sbjct: 755  NLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVM 814

Query: 387  AALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMK 521
             A  L D  K+   V D+  YN  I+      K   A+  F E +
Sbjct: 815  EARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETR 859



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 6/182 (3%)
 Frame = +3

Query: 27  YDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELV--TICVNS----QRLKDAFN 188
           +  L+++ AR    D    +L+EM       SN+   +LV   +C++      ++  A+ 
Sbjct: 241 FTTLVRVFAREGRIDAALSLLDEMK------SNSFTADLVLYNVCIDCFGKVGKVDMAWK 294

Query: 189 LIQSIRKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFA 368
               ++     P    YTTLIG          A+ LF+++        +  + T+I  + 
Sbjct: 295 FFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYG 354

Query: 369 KEGQVDAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDDV 548
             G+ D A +LL+  K    +   + YN  + C G+ GKV+ A +   EM+ Q  AP+  
Sbjct: 355 SAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLT 413

Query: 549 TY 554
           TY
Sbjct: 414 TY 415



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/127 (25%), Positives = 62/127 (48%)
 Frame = +3

Query: 174 KDAFNLIQSIRKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTL 353
           ++ + L   +++        AY T+I       +   A  L ++M+  G +  +  + ++
Sbjct: 604 RETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663

Query: 354 IRVFAKEGQVDAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRL 533
           +   AK  ++D A  L +E KS     + V+Y+  ID FGKVG++D A+    E+  + L
Sbjct: 664 VDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723

Query: 534 APDDVTY 554
            P+  T+
Sbjct: 724 TPNSYTW 730


>ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544013|gb|EEF45539.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 901

 Score =  241 bits (616), Expect = 4e-62
 Identities = 118/179 (65%), Positives = 144/179 (80%)
 Frame = +3

Query: 18  PGAYDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAFNLIQ 197
           P AYD LL +MA+   FD  E++L EMS+AG+  S  TCIEL+  C+ S +L++ F+LIQ
Sbjct: 128 PEAYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQ 187

Query: 198 SIRKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEG 377
            +RKFKFRPAFSAYTTLIGA + V E  + LTLF QMQELGYEV++ LFTT+IRVFA+EG
Sbjct: 188 CMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREG 247

Query: 378 QVDAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDDVTY 554
           ++DAAL+LLDE+KS+   AD VLYNVCIDCFGK GKVDMAWKFFHE+K+  L PDDVTY
Sbjct: 248 RLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTY 306



 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 41/165 (24%), Positives = 73/165 (44%)
 Frame = +3

Query: 27   YDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAFNLIQSIR 206
            Y  L+    +    D    ++EE+   G   +  T   L+   V ++ + +A    Q+++
Sbjct: 690  YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMK 749

Query: 207  KFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQVD 386
              K  P    Y+ LI     V +   A   +Q+MQ+ G + N   +TT+I   AK G + 
Sbjct: 750  NLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIA 809

Query: 387  AALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMK 521
             A +L +  K++  V D+  YN  I+      +   A+K F E +
Sbjct: 810  EASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETR 854



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/131 (23%), Positives = 66/131 (50%)
 Frame = +3

Query: 162  SQRLKDAFNLIQSIRKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQL 341
            S ++  A+ L++ ++    +P    Y ++I   A +     A  LF++ +  G E+N+ +
Sbjct: 630  SGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVI 689

Query: 342  FTTLIRVFAKEGQVDAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMK 521
            +++LI  F K G++D A  +++E+       +   +N  +D   K  +++ A   F  MK
Sbjct: 690  YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMK 749

Query: 522  AQRLAPDDVTY 554
              +  P+ +TY
Sbjct: 750  NLKGTPNHITY 760



 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 6/182 (3%)
 Frame = +3

Query: 27  YDMLLKLMARCKCFDNLERVLEEMSLAGYDFSN--NTCIELVTICVN----SQRLKDAFN 188
           +  ++++ AR    D    +L+EM       SN  +  I L  +C++    + ++  A+ 
Sbjct: 236 FTTVIRVFAREGRLDAALSLLDEMK------SNCLHADIVLYNVCIDCFGKAGKVDMAWK 289

Query: 189 LIQSIRKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFA 368
               I+     P    YT++IG     +    A+ +F+QM++         + T+I  + 
Sbjct: 290 FFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYG 349

Query: 369 KEGQVDAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDDV 548
             G+ D A +LL+  K+   +   + YN  + C GK G++  A + F EMK +  AP+  
Sbjct: 350 SAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLS 408

Query: 549 TY 554
           TY
Sbjct: 409 TY 410



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/107 (29%), Positives = 55/107 (51%)
 Frame = +3

Query: 234 AYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDEV 413
           AY T I       +   A  L ++M+  G +  +  + ++I   AK  ++D A  L +E 
Sbjct: 619 AYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 678

Query: 414 KSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDDVTY 554
           KS+    + V+Y+  ID FGKVG++D A+    E+  + L P+  T+
Sbjct: 679 KSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 725


>ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328340|gb|EFH58759.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 871

 Score =  241 bits (614), Expect = 7e-62
 Identities = 117/181 (64%), Positives = 148/181 (81%)
 Frame = +3

Query: 12  HSPGAYDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAFNL 191
           H P +Y+ LL +MARC+ FD L+++L EMS+AG+  S NTCIE+V  CV + +L++ F++
Sbjct: 96  HCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDV 155

Query: 192 IQSIRKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAK 371
           +Q++RKFKFRPAFSAYTTLIGA + V+   + LTLFQQMQELGYE  + LFTTLIR FAK
Sbjct: 156 VQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215

Query: 372 EGQVDAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDDVT 551
           EG+VD+AL+LLDE+KS +  AD VLYNVCID FGKVGKVDMAWKFFHE++A  L PD+VT
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275

Query: 552 Y 554
           Y
Sbjct: 276 Y 276



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/169 (26%), Positives = 74/169 (43%)
 Frame = +3

Query: 27   YDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAFNLIQSIR 206
            Y  L+    +    D    +LEE+   G   +  T   L+   V ++ + +A    QS++
Sbjct: 660  YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 719

Query: 207  KFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQVD 386
            + K  P    Y  LI     V +   A   +Q+MQ+ G + +   +TT+I   AK G + 
Sbjct: 720  ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779

Query: 387  AALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRL 533
             A AL D  K++  V D+  YN  I+      +   A+  F E + + L
Sbjct: 780  EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828



 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 32/129 (24%), Positives = 64/129 (49%)
 Frame = +3

Query: 168 RLKDAFNLIQSIRKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFT 347
           ++  A+ L++ ++   F P    Y ++I   A +     A  LF++ +    E+N+ +++
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661

Query: 348 TLIRVFAKEGQVDAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQ 527
           +LI  F K G++D A  +L+E+       +   +N  +D   K  +++ A   F  MK  
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEL 721

Query: 528 RLAPDDVTY 554
           +  P+ VTY
Sbjct: 722 KCTPNQVTY 730



 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 38/177 (21%), Positives = 81/177 (45%)
 Frame = +3

Query: 24   AYDMLLKLMARCKCFDNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAFNLIQSI 203
            AY++++    +C   +   ++LEEM   G++ +  T   ++       RL +A+ L +  
Sbjct: 589  AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648

Query: 204  RKFKFRPAFSAYTTLIGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQV 383
            +  +       Y++LI     V     A  + +++ + G   N+  + +L+    K  ++
Sbjct: 649  KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEI 708

Query: 384  DAALALLDEVKSHAFVADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDDVTY 554
            + AL     +K      + V Y + I+   KV K + A+ F+ EM+ Q + P  ++Y
Sbjct: 709  NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 38/162 (23%), Positives = 68/162 (41%)
 Frame = +3

Query: 69  DNLERVLEEMSLAGYDFSNNTCIELVTICVNSQRLKDAFNLIQSIRKFKFRPAFSAYTTL 248
           D+  ++ E+M  +    ++     L+    N  R +D   + + +      P      T 
Sbjct: 464 DDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTY 523

Query: 249 IGACAVVHEPGLALTLFQQMQELGYEVNMQLFTTLIRVFAKEGQVDAALALLDEVKSHAF 428
           +       EP     +F++++   +  + + ++ LI    K G  +    L   +K    
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583

Query: 429 VADTVLYNVCIDCFGKVGKVDMAWKFFHEMKAQRLAPDDVTY 554
           V DT  YN+ ID F K GKV+ A++   EMK +   P  VTY
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625