BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022670
         (1402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [V...   583   e-164
ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis tha...   571   e-160
ref|XP_002515195.1| peptide chain release factor, putative [Rici...   566   e-159
ref|XP_002320945.1| predicted protein [Populus trichocarpa] gi|2...   563   e-158
ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arab...   561   e-157

>ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
            gi|297744098|emb|CBI37068.3| unnamed protein product
            [Vitis vinifera]
          Length = 392

 Score =  583 bits (1502), Expect = e-164
 Identities = 294/370 (79%), Positives = 331/370 (89%)
 Frame = +3

Query: 72   NNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKIRSSME 251
            + E QPQLSTDLI IME RL AIEHR+  LQ+F+N+PE  +P EY+RANKELRK+RSS+E
Sbjct: 13   STELQPQLSTDLIGIMEQRLSAIEHRSAYLQDFINRPEA-SPVEYARANKELRKLRSSIE 71

Query: 252  LITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRXXXXXXXXXXPKDDA 431
             IT+LR+KQKEIDGLKSL+AEC EDKDM +MAAEEL +A  EEKR          PKD+A
Sbjct: 72   HITELRNKQKEIDGLKSLMAECSEDKDMLNMAAEELGQAAEEEKRLQNLLLKSLLPKDEA 131

Query: 432  DERDCILEVRAGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGLKGIKEASGAI 611
            DERDCILEVRAGTGGEEASLFA+DIF+MYEKY+ K GWKF+VVDI ES LKG KEASGAI
Sbjct: 132  DERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAI 191

Query: 612  CGSGSFGRLKFESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQLRNEDLKIDTY 791
             GSG +G+LKFESGIHRVQRVP+TEK+GRVHTSAVSVAILPQADEVDVQLRNEDL+IDTY
Sbjct: 192  SGSGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTY 251

Query: 792  RSGGSGGQHANTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAKLYELERSRLH 971
            RSGGSGGQHANTTNSAVR+THIP+G+TVAIQDERSQH NKAKAL+V+CAKLYE+ERSR+ 
Sbjct: 252  RSGGSGGQHANTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQ 311

Query: 972  TSRSKLRSDQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLVGENLDVFVDALLL 1151
              RSKLR +QIGSGDRSERIRTYNFPQGRVTDHRVGITHHS++DV+ GENLDVF+DALLL
Sbjct: 312  KDRSKLRMEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSVNDVMQGENLDVFIDALLL 371

Query: 1152 KQEMDAIASF 1181
            +QEMDAIASF
Sbjct: 372  QQEMDAIASF 381


>ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis thaliana]
            gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis
            thaliana] gi|330255695|gb|AEC10789.1| Peptide chain
            release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  571 bits (1472), Expect = e-160
 Identities = 283/382 (74%), Positives = 332/382 (86%)
 Frame = +3

Query: 42   NGNIKRFFSTNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANK 221
            + N+ R ++T  E  PQLS DLIKIM+ RL AIEHRN  LQ  +NQPE  +P E+SRANK
Sbjct: 33   SSNMIRLYTTGME--PQLSPDLIKIMDQRLSAIEHRNAVLQKLINQPE-YSPEEFSRANK 89

Query: 222  ELRKIRSSMELITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRXXXXX 401
            ELRK+R SM LI DLR+KQKEIDGLKSL++E  +DKDM D+A  ELDEA+ EEKR     
Sbjct: 90   ELRKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLL 149

Query: 402  XXXXXPKDDADERDCILEVRAGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGL 581
                 PKD+ADERDCILEVRAGTGGEEASLFA+DIFRMYE+Y+ K+GWKFD+VDI ES +
Sbjct: 150  LKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDM 209

Query: 582  KGIKEASGAICGSGSFGRLKFESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQL 761
            KG KEAS AICG+  +G+LKFESGIHRVQR+P+TEK+GR+HTSA+SVAILPQADEVDVQL
Sbjct: 210  KGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQL 269

Query: 762  RNEDLKIDTYRSGGSGGQHANTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAK 941
            RNEDL+IDTYRSGGSGGQHANTTNSAVR+ H+PTG+ V+IQDERSQH N+AKAL+V+CA+
Sbjct: 270  RNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCAR 329

Query: 942  LYELERSRLHTSRSKLRSDQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLVGEN 1121
            LYE+ER R+ +SRSKLRSDQIGSGDRS RIRTYNFPQGRVTDHRVGITHH+I+D++ GEN
Sbjct: 330  LYEIERLRIQSSRSKLRSDQIGSGDRSGRIRTYNFPQGRVTDHRVGITHHAIEDMMQGEN 389

Query: 1122 LDVFVDALLLKQEMDAIASFSS 1187
            LD+F+DALLL+QEMDAIASFSS
Sbjct: 390  LDMFIDALLLRQEMDAIASFSS 411


>ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
            gi|223545675|gb|EEF47179.1| peptide chain release factor,
            putative [Ricinus communis]
          Length = 422

 Score =  566 bits (1459), Expect = e-159
 Identities = 288/376 (76%), Positives = 333/376 (88%)
 Frame = +3

Query: 57   RFFSTNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKI 236
            R +ST  E Q  LS DLI+IME RL AIEHR+  L+NF+++ E  +P+EYSRANKELRK+
Sbjct: 47   RAYST--ELQSHLSPDLIRIMEQRLSAIEHRSAYLENFIDKLEA-SPAEYSRANKELRKL 103

Query: 237  RSSMELITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRXXXXXXXXXX 416
            R  +ELI++LRS QKEIDGL+SL+AECPEDK M DMA EEL++AI EEKR          
Sbjct: 104  RRPVELISELRSIQKEIDGLRSLMAECPEDKHMIDMANEELNQAIEEEKRLQNVLLKSLL 163

Query: 417  PKDDADERDCILEVRAGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGLKGIKE 596
            P DDADERDCILEVRAGTGGEEASLF++DIFRMYE+Y+ K+GWKF+VVDI ES LKG KE
Sbjct: 164  PTDDADERDCILEVRAGTGGEEASLFSMDIFRMYERYSQKKGWKFEVVDITESDLKGYKE 223

Query: 597  ASGAICGSGSFGRLKFESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQLRNEDL 776
            AS AI G+G FG+LKFESGIHRVQRVP+TEK+GRVHTSAVSVAILPQADEVDVQLRNEDL
Sbjct: 224  ASAAISGAGVFGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDL 283

Query: 777  KIDTYRSGGSGGQHANTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAKLYELE 956
            +IDTYRSGGSGGQHANTTNSAVR+TH+PTG+TV+IQDERSQH NKAKAL+V+CAKLYE+E
Sbjct: 284  RIDTYRSGGSGGQHANTTNSAVRVTHLPTGMTVSIQDERSQHMNKAKALKVLCAKLYEIE 343

Query: 957  RSRLHTSRSKLRSDQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLVGENLDVFV 1136
            RSR+  SRSKLRS+QIGSGDRSERIRTYNFPQGRVTDHRVGITHH+I++++ GE+LDVF+
Sbjct: 344  RSRIQMSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAINNMMQGESLDVFI 403

Query: 1137 DALLLKQEMDAIASFS 1184
            DALLL+QEMDAIASFS
Sbjct: 404  DALLLQQEMDAIASFS 419


>ref|XP_002320945.1| predicted protein [Populus trichocarpa] gi|222861718|gb|EEE99260.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  563 bits (1450), Expect = e-158
 Identities = 280/357 (78%), Positives = 319/357 (89%)
 Frame = +3

Query: 117  METRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKIRSSMELITDLRSKQKEIDGL 296
            ME RL AIEHR+ CL+NFMNQPE  +P+E+SRANKELRK+R SMELIT LR+KQKEIDGL
Sbjct: 1    MEQRLSAIEHRSACLENFMNQPEA-SPTEFSRANKELRKLRGSMELITYLRTKQKEIDGL 59

Query: 297  KSLIAECPEDKDMRDMAAEELDEAIGEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGG 476
            +SL+ ECPEDKDM DMA EEL +A+ EEKR          P+DDADERDCILEVRAG+GG
Sbjct: 60   RSLMTECPEDKDMLDMANEELSQAMEEEKRLQNLLLKSLLPRDDADERDCILEVRAGSGG 119

Query: 477  EEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGLKGIKEASGAICGSGSFGRLKFESGI 656
            EEASLFA+DIF+MYE+++   GWKF+VV I ES LKG KEAS AI G+  FG+LKFESGI
Sbjct: 120  EEASLFAMDIFKMYERFSQNNGWKFEVVYITESDLKGYKEASAAISGADVFGKLKFESGI 179

Query: 657  HRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQLRNEDLKIDTYRSGGSGGQHANTTNS 836
            HRVQRVP+TEK GRVHTSAVSVAILPQADEVD+QLRNEDL+IDTYRSGGSGGQHANTTNS
Sbjct: 180  HRVQRVPVTEKLGRVHTSAVSVAILPQADEVDLQLRNEDLRIDTYRSGGSGGQHANTTNS 239

Query: 837  AVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAKLYELERSRLHTSRSKLRSDQIGSGD 1016
            AVR+TH+PTG+TV+IQDERSQH NK+KAL+V+CAKLYE+ERSRLH SRS+LRS+QIGSGD
Sbjct: 240  AVRITHLPTGITVSIQDERSQHMNKSKALKVLCAKLYEMERSRLHMSRSRLRSEQIGSGD 299

Query: 1017 RSERIRTYNFPQGRVTDHRVGITHHSIDDVLVGENLDVFVDALLLKQEMDAIASFSS 1187
            RSERIRTYNFPQGRVTDHRVGITHHSI+DV+ GE+LDVF+DALLL+QEMDAIASF S
Sbjct: 300  RSERIRTYNFPQGRVTDHRVGITHHSINDVMQGESLDVFIDALLLQQEMDAIASFGS 356


>ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
            lyrata] gi|297327940|gb|EFH58360.1| hypothetical protein
            ARALYDRAFT_904175 [Arabidopsis lyrata subsp. lyrata]
          Length = 410

 Score =  561 bits (1447), Expect = e-157
 Identities = 281/383 (73%), Positives = 328/383 (85%)
 Frame = +3

Query: 39   RNGNIKRFFSTNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRAN 218
            R+  + R ++T  E  PQLS DLIKIM+ RL AIEHRN  LQ  +NQPE  +P E+SRAN
Sbjct: 29   RSSKMIRLYTTGME--PQLSPDLIKIMDQRLSAIEHRNALLQKLINQPE-YSPEEFSRAN 85

Query: 219  KELRKIRSSMELITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRXXXX 398
            KELRK+R SM LI DLR+KQKEIDGLKSL++E  +DKDM DMA  ELDEA+ EEKR    
Sbjct: 86   KELRKLRDSMFLINDLRAKQKEIDGLKSLVSESSDDKDMLDMAVSELDEAVEEEKRLQTL 145

Query: 399  XXXXXXPKDDADERDCILEVRAGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESG 578
                  PKD+ADERDCILEVRAGTGGEEASLFA+DIFRMYE+Y+ K+ WKFD+VDI ES 
Sbjct: 146  LLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKAWKFDIVDITESD 205

Query: 579  LKGIKEASGAICGSGSFGRLKFESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQ 758
            +KG KEAS AICG+  +G+LKFESGIHRVQR+P+TEK+GR+HTSA+SVAILPQADEVDVQ
Sbjct: 206  MKGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQ 265

Query: 759  LRNEDLKIDTYRSGGSGGQHANTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICA 938
            LRNEDL+IDTYRSGGSGGQHANTTNSAVR+ H+PTG+ V+IQDERSQH N+AKAL+V+CA
Sbjct: 266  LRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCA 325

Query: 939  KLYELERSRLHTSRSKLRSDQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLVGE 1118
            +LYE+ER R+ +SRSKLRSDQIGSGDRS RIRTYNFPQGRVTDHRVGIT H+I+D++ GE
Sbjct: 326  RLYEIERLRIQSSRSKLRSDQIGSGDRSGRIRTYNFPQGRVTDHRVGITLHAIEDMMQGE 385

Query: 1119 NLDVFVDALLLKQEMDAIASFSS 1187
             LD F+DALLL+QEMDAIASFSS
Sbjct: 386  ILDSFIDALLLRQEMDAIASFSS 408