BLASTX nr result

ID: Coptis21_contig00022651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022651
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515433.1| WRKY transcription factor, putative [Ricinus...   127   1e-27
gb|ABI23959.1| WRKY transcription factor 2 [Gossypium hirsutum]       125   4e-27
gb|ACV92007.1| WRKY transcription factor 5 [(Populus tomentosa x...   125   6e-27
ref|XP_003530265.1| PREDICTED: probable WRKY transcription facto...   125   7e-27
ref|XP_003543702.1| PREDICTED: probable WRKY transcription facto...   124   9e-27

>ref|XP_002515433.1| WRKY transcription factor, putative [Ricinus communis]
           gi|223545377|gb|EEF46882.1| WRKY transcription factor,
           putative [Ricinus communis]
          Length = 211

 Score =  127 bits (319), Expect = 1e-27
 Identities = 72/180 (40%), Positives = 106/180 (58%), Gaps = 27/180 (15%)
 Frame = +2

Query: 137 TWMDTSLSLDLNAAHNECPNNDLRDDLSTN------------------EQASVMVEEMNR 262
           +W++TSL L++N+      +   R+ L+ +                   Q SV+VEE+ R
Sbjct: 5   SWVNTSLDLNVNSTFKHIDSVPKRELLAVDFSGLDPKVPIKEEKPFLDPQTSVLVEELTR 64

Query: 263 IGAENKKLNEMLAVLCENFNTLNNHLVDLMNKNASTAL--NTASRKRKVEDIGAIDSIVP 436
           I  ENKKL +ML VLCEN+N L NHL DLM+KN+   +   ++SRKRK  +     +I+ 
Sbjct: 65  ISTENKKLTQMLTVLCENYNVLQNHLADLMSKNSDKEIIAPSSSRKRKAAESEDYSNIIS 124

Query: 437 ------NGNTDCCSS-EVDSSKKQRGDVNTKITTMYAQAEPNENRLVVKDGYQWRKYGQK 595
                 NG T+  SS E++S  K+  ++ TKI++ Y + +P++  LVVKDGYQWRKYGQK
Sbjct: 125 GANNINNGTTESTSSDELESGTKRTKEIKTKISSAYLRTDPSDTSLVVKDGYQWRKYGQK 184


>gb|ABI23959.1| WRKY transcription factor 2 [Gossypium hirsutum]
          Length = 313

 Score =  125 bits (315), Expect = 4e-27
 Identities = 67/166 (40%), Positives = 101/166 (60%), Gaps = 10/166 (6%)
 Frame = +2

Query: 128 MALTWMDTSLSLDLNAAHNECP------NNDLRDD---LSTNEQASVMVEEMNRIGAENK 280
           M  TW+DT+L L++N++HN         +  L D    +   ++   +VEE+NRI AENK
Sbjct: 1   MESTWVDTTLDLNINSSHNTIQVLKRESSGKLADSDVKVPVKQETGALVEELNRIIAENK 60

Query: 281 KLNEMLAVLCENFNTLNNHLVDLMNKNA-STALNTASRKRKVEDIGAIDSIVPNGNTDCC 457
           KL EML VLCE +++L N  ++L+++N+ S A    S+KRK E    +  I  +G  +  
Sbjct: 61  KLTEMLTVLCERYSSLQNQYMELVSRNSGSDATAATSKKRKAECEDYVPMIGFSGKAESS 120

Query: 458 SSEVDSSKKQRGDVNTKITTMYAQAEPNENRLVVKDGYQWRKYGQK 595
            S+ DS KK +  +  KI+  Y +  P++N L+V+DGYQWRKYGQK
Sbjct: 121 FSDEDSCKKPKDCIKAKISRAYVRPNPSDNSLIVRDGYQWRKYGQK 166


>gb|ACV92007.1| WRKY transcription factor 5 [(Populus tomentosa x P. bolleana) x P.
           tomentosa]
          Length = 303

 Score =  125 bits (314), Expect = 6e-27
 Identities = 67/156 (42%), Positives = 96/156 (61%), Gaps = 3/156 (1%)
 Frame = +2

Query: 137 TWMDTSLSLDLNAAHNECPN-NDLRDDLSTNEQASVMVEEMNRIGAENKKLNEMLAVLCE 313
           +W+DTSL L++N      P   D +   +  E+   +V EMNR+  EN+KL EML V+CE
Sbjct: 5   SWVDTSLDLNINPLRELKPAFMDFQTKPTAKEETGALVVEMNRVSEENRKLTEMLTVMCE 64

Query: 314 NFNTLNNHLVDLMNKNASTALNTASRKRKVEDIGAID-SIVPNGNTDCCSSEVDSSKKQR 490
           ++N L + L+D M+KN    L   S+KRK E     D +I  NG+++  S++ +SSKK R
Sbjct: 65  SYNALRSQLMDYMSKNGEEELLAPSKKRKSESSNNNDNNIAMNGHSESSSTDQESSKKPR 124

Query: 491 GDV-NTKITTMYAQAEPNENRLVVKDGYQWRKYGQK 595
            +V   KI+  Y + E  +  L+VKDGYQWRKYGQK
Sbjct: 125 EEVIKDKISKAYVRTEAGDKSLIVKDGYQWRKYGQK 160


>ref|XP_003530265.1| PREDICTED: probable WRKY transcription factor 40-like isoform 1
           [Glycine max]
          Length = 311

 Score =  125 bits (313), Expect = 7e-27
 Identities = 68/167 (40%), Positives = 104/167 (62%), Gaps = 14/167 (8%)
 Frame = +2

Query: 137 TWMDTSLSLDLNA--AHNECPNNDLRDDLST---------NEQASVMVEEMNRIGAENKK 283
           +W++TSL L++N    H E P  ++  +L +          E  S + EE+ R+ AENKK
Sbjct: 5   SWINTSLDLNINPRRVHEEVPK-EVESELFSLGMTKFNVEEESTSDLEEELKRVTAENKK 63

Query: 284 LNEMLAVLCENFNTLNNHLVDLMNKNASTALNTASRKRKVEDIGAIDSIV--PNGNTDCC 457
           L EML+V+CEN+NTL NHL++ M KN    ++  S+KRK E      +++   NGN++  
Sbjct: 64  LAEMLSVVCENYNTLRNHLMECMRKNGEKEVSPTSKKRKSESSNNNSNLMGTNNGNSESS 123

Query: 458 SSEVDSSKKQRGD-VNTKITTMYAQAEPNENRLVVKDGYQWRKYGQK 595
           S++ +S KK R + +  KI+ +Y + E ++  L+VKDGYQWRKYGQK
Sbjct: 124 STDEESCKKPREEIIKAKISRVYVRTEASDTSLIVKDGYQWRKYGQK 170


>ref|XP_003543702.1| PREDICTED: probable WRKY transcription factor 40-like isoform 1
           [Glycine max]
          Length = 309

 Score =  124 bits (312), Expect = 9e-27
 Identities = 69/167 (41%), Positives = 103/167 (61%), Gaps = 14/167 (8%)
 Frame = +2

Query: 137 TWM-DTSLSLDLNA--AHNECPNNDLRDD-LSTN----------EQASVMVEEMNRIGAE 274
           +WM +TSL L++N    H E P  ++ ++ LS N          E A  + EE+ R+ AE
Sbjct: 5   SWMINTSLDLNINPHRLHEELPKKEVENNFLSLNLEVKKSSVKQESAGALAEELKRVSAE 64

Query: 275 NKKLNEMLAVLCENFNTLNNHLVDLMNKNASTALNTASRKRKVEDIGAIDSIVPNGNTDC 454
           NKKL EML  +CEN+NTL  +L++ M KN     +++S+KRK E       +  NG ++ 
Sbjct: 65  NKKLTEMLTEMCENYNTLRGNLMEYMRKNPDKE-HSSSKKRKSESNNNSIPMGVNGTSES 123

Query: 455 CSSEVDSSKKQRGDVNTKITTMYAQAEPNENRLVVKDGYQWRKYGQK 595
            S++ +S KKQ+ D+ TKI+ +Y + E ++  L+VKDGYQWRKYGQK
Sbjct: 124 SSTDEESCKKQKEDIKTKISRVYMRTEASDKSLIVKDGYQWRKYGQK 170


Top