BLASTX nr result

ID: Coptis21_contig00022628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022628
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                   117   7e-25
emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]   107   1e-21
emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]   106   2e-21
emb|CAN79644.1| hypothetical protein VITISV_033788 [Vitis vinifera]   104   6e-21
emb|CAN62421.1| hypothetical protein VITISV_020606 [Vitis vinifera]   104   6e-21

>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/95 (57%), Positives = 72/95 (75%)
 Frame = -3

Query: 308  GKRILRYMK*TVNHGLQYFSVENPKLVGYCDNDWAGNVNNCKSTSVYVFNIGSSVVSWSP 129
            GKR+LRY+  T+N G+ Y  V    L G+CD+DW GNV++ +STS YVF++GS V SW+ 
Sbjct: 1102 GKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGGNVDDHRSTSGYVFSMGSGVFSWTS 1161

Query: 128  KKQQVVAFSTTESEYIALASASCQAR*LRWILEEL 24
            KKQ VV  STTE+EYI+LA+A CQA  LRW+L+EL
Sbjct: 1162 KKQSVVTLSTTEAEYISLAAAGCQALWLRWMLKEL 1196


>emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]
          Length = 1945

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/101 (53%), Positives = 73/101 (72%)
 Frame = -3

Query: 305  KRILRYMK*TVNHGLQYFSVENPKLVGYCDNDWAGNVNNCKSTSVYVFNIGSSVVSWSPK 126
            KR+L+Y+K T N G+ Y      KL GY D+DWAG+V++ KSTS YVF IGS V+ W+ +
Sbjct: 1212 KRVLKYVKGTTNLGIWYLKTVGVKLDGYADSDWAGSVDDMKSTSSYVFTIGSGVICWNSR 1271

Query: 125  KQQVVAFSTTESEYIALASASCQAR*LRWILEELNQDVKLP 3
            KQ+VVA STTE+EYI+LA+A+ QA  LR +L +L Q+   P
Sbjct: 1272 KQEVVAQSTTEAEYISLAAAANQAIWLRKLLADLGQEQTSP 1312


>emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]
          Length = 2041

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/101 (52%), Positives = 72/101 (71%)
 Frame = -3

Query: 305  KRILRYMK*TVNHGLQYFSVENPKLVGYCDNDWAGNVNNCKSTSVYVFNIGSSVVSWSPK 126
            KR+L+Y+K T N G+ Y      KL GY D+DWAG+V++ KSTS Y F IGS V+ W+ +
Sbjct: 1857 KRVLKYLKGTTNLGIWYLKTGGVKLDGYADSDWAGSVDDMKSTSGYAFTIGSGVICWNSR 1916

Query: 125  KQQVVAFSTTESEYIALASASCQAR*LRWILEELNQDVKLP 3
            KQ+VVA STTE+EYI+LA+A+ QA  LR +L +L Q+   P
Sbjct: 1917 KQEVVAQSTTEAEYISLAAAANQAIWLRKLLADLGQEQSSP 1957


>emb|CAN79644.1| hypothetical protein VITISV_033788 [Vitis vinifera]
          Length = 1181

 Score =  104 bits (260), Expect = 6e-21
 Identities = 53/101 (52%), Positives = 71/101 (70%)
 Frame = -3

Query: 305  KRILRYMK*TVNHGLQYFSVENPKLVGYCDNDWAGNVNNCKSTSVYVFNIGSSVVSWSPK 126
            KR+L+Y+K T N G+ Y      KL GY D+DW G+V+  KSTS YVF IGS V+ W+ +
Sbjct: 997  KRVLKYVKGTTNLGIWYLKTGGVKLDGYADSDWVGSVDYMKSTSGYVFTIGSGVICWNSR 1056

Query: 125  KQQVVAFSTTESEYIALASASCQAR*LRWILEELNQDVKLP 3
            KQ+VVA STTE+EYI+LA+A+ QA  LR +L +L Q+   P
Sbjct: 1057 KQEVVAQSTTEAEYISLAAAANQAIWLRKLLADLGQEQSSP 1097


>emb|CAN62421.1| hypothetical protein VITISV_020606 [Vitis vinifera]
          Length = 1798

 Score =  104 bits (260), Expect = 6e-21
 Identities = 53/101 (52%), Positives = 72/101 (71%)
 Frame = -3

Query: 305  KRILRYMK*TVNHGLQYFSVENPKLVGYCDNDWAGNVNNCKSTSVYVFNIGSSVVSWSPK 126
            KR+L+Y+K T N G+ Y      KL GY D+DWAG+V++ KS S YVF IGS V+ W+ +
Sbjct: 1249 KRVLKYVKGTTNLGIWYLKTGGVKLDGYXDSDWAGSVDDMKSXSGYVFTIGSGVICWNSR 1308

Query: 125  KQQVVAFSTTESEYIALASASCQAR*LRWILEELNQDVKLP 3
            KQ+VVA STTE+EYI+LA+A+ QA  LR +L +L Q+   P
Sbjct: 1309 KQEVVAQSTTEAEYISLAAAANQAIWLRKLLADLGQEQSSP 1349


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