BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022569
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523406.1| RNA binding protein, putative [Ricinus commu...   482   e-134
ref|XP_002297618.1| predicted protein [Populus trichocarpa] gi|2...   463   e-128
ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vi...   456   e-126
emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]   453   e-125
emb|CBI16556.3| unnamed protein product [Vitis vinifera]              426   e-117

>ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
            gi|223537356|gb|EEF38985.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 771

 Score =  482 bits (1241), Expect = e-134
 Identities = 236/368 (64%), Positives = 296/368 (80%), Gaps = 1/368 (0%)
 Frame = +3

Query: 6    IQVLDRVGRHNFPEKILTKSHGFNLLKVLNGGSIGGDESLYHVN-NEKVLPDDHFHHRSP 182
            + +LD VG+ +FPEKILT+S G + LK +   S GG+ESL +++ N KVL + H  H   
Sbjct: 322  MNILDEVGKQSFPEKILTRSQGLSTLKAVKYSSAGGNESLANLSQNGKVLLNGHLRHTLT 381

Query: 183  ILNSRSFQLDDQTSPGSSPDSVDLKFYNLRSQSPKYNSLDEVMGRIYLIAKDQHGCRFLQ 362
              ++  FQLD  +S   SPD +DLK  NLR Q  KYNS+DEV GR+YL+AKDQHGCRFLQ
Sbjct: 382  PPSAECFQLDHLSSWDLSPDIIDLKSTNLRPQPQKYNSVDEVTGRVYLMAKDQHGCRFLQ 441

Query: 363  KKFTEGCAEDVDKIFTEIIGHIVELMTDPFGNYLVQKLLEVCTKDQKNQILHAITRKPGD 542
            +KF+EG  +D++KIF E+I HI ELMTDPFGNYLVQKLLEVC +DQ+ QIL AITRK G+
Sbjct: 442  RKFSEGTPQDIEKIFLEVIDHIAELMTDPFGNYLVQKLLEVCNEDQRMQILCAITRKAGE 501

Query: 543  LVRISLDMHGTRAVQKVIETLRSPEQFSLVVSSLKPGIVNLMKDTNGNHVAQRCLQHLLP 722
            LVRIS DMHGTRAVQKVIETL++P+QFS+VVSSLKPGIV L+K+ NGNHVAQRCLQ+L P
Sbjct: 502  LVRISCDMHGTRAVQKVIETLKTPQQFSMVVSSLKPGIVTLIKNMNGNHVAQRCLQYLTP 561

Query: 723  EYKEYLFEDAIAHCSKLAKDRHACCVLQKCLTHCDGEHRRRLVSGITSDALSLSQNQYGN 902
            E+ E+LFE A  +C +LA DRH CCVLQKCL+H +GE RR L+S ITS+AL LSQ+ +GN
Sbjct: 562  EHSEFLFEAATTNCVELATDRHGCCVLQKCLSHSEGEQRRCLISEITSNALILSQDPFGN 621

Query: 903  YVVQFVFELQLPWVTIGVLDKLEGSYGYLSMQKYSSNVVEKCLKFAGEDRRPRIVQELVS 1082
            YVVQFVFEL+LPW T  +LD+LEG+YG LSMQKYSSNV+EKCLK+A E+ R  I+++L+S
Sbjct: 622  YVVQFVFELRLPWATANILDQLEGNYGDLSMQKYSSNVIEKCLKYASEEHRAHIIRQLIS 681

Query: 1083 DSRLDQIL 1106
            ++ LDQ++
Sbjct: 682  NTHLDQVM 689


>ref|XP_002297618.1| predicted protein [Populus trichocarpa] gi|222844876|gb|EEE82423.1|
            predicted protein [Populus trichocarpa]
          Length = 620

 Score =  463 bits (1192), Expect = e-128
 Identities = 240/375 (64%), Positives = 290/375 (77%), Gaps = 8/375 (2%)
 Frame = +3

Query: 6    IQVLDRVGRHNFPEKILTKSHGFNLLKVLNGGSIGGDESLYHVN-NEKVLPDDHFHHRSP 182
            I+VLD+VG+ +FPEKILT+S G N LK L  GS+GG+ESL H+N N K+L + H  H   
Sbjct: 215  IRVLDKVGKQSFPEKILTRSQGLNTLKALKFGSVGGNESLAHLNHNGKLLSNAHLFHSL- 273

Query: 183  ILNSRSFQLDDQTSPGSSPDSVDLKFYNLRSQSPKYNSLDEVMGRIYLIAKDQHGCRFLQ 362
                            S+P +      NLR+Q PKYNS+DEV GRIYL+AKDQHGCRFLQ
Sbjct: 274  ----------------STPTAGT----NLRAQPPKYNSVDEVTGRIYLMAKDQHGCRFLQ 313

Query: 363  KKFTEGCAEDVDKIFTEIIGHIVELMTDPFGNYLVQKLLEVCTKDQKNQILHAITRKPGD 542
            + F+EG  +DV+KIF EII HIVELMTDPFGNYLVQKLLEVC +DQ+ QIL  ITRK G+
Sbjct: 314  RTFSEGTPQDVEKIFLEIIDHIVELMTDPFGNYLVQKLLEVCNEDQRMQILRTITRKAGE 373

Query: 543  LVRISLDMHGTRAVQKVIETLRSPEQFSLVVSSLKPGIVNLMKDTNGNHVAQRCLQHLLP 722
            LVRIS DMHGTRAVQKVIETL++PEQFS+VVS+LKP IV L+K+ NGNHVAQRCLQ+L+P
Sbjct: 374  LVRISCDMHGTRAVQKVIETLKTPEQFSMVVSALKPCIVTLIKNMNGNHVAQRCLQYLMP 433

Query: 723  EYKEYLFEDAIAHCSKLAKDRHACCVLQKCLTHCDGEHRRRLVSGITSDALSLSQNQYG- 899
            EY E+LFE   A+C +LA DRH CCVLQKCL+   GE RR LVS ITS+AL LSQ+ +G 
Sbjct: 434  EYSEFLFEATTANCVELATDRHGCCVLQKCLSQSKGEQRRCLVSEITSNALILSQDPFGY 493

Query: 900  ------NYVVQFVFELQLPWVTIGVLDKLEGSYGYLSMQKYSSNVVEKCLKFAGEDRRPR 1061
                  NYVVQFVFEL+LPW    +LD+LEG+YG LS+QKYSSNVVEKCLK+AGE RR R
Sbjct: 494  CIFLFSNYVVQFVFELRLPWAATDILDQLEGNYGDLSVQKYSSNVVEKCLKYAGEVRRTR 553

Query: 1062 IVQELVSDSRLDQIL 1106
            I++EL+++SRLDQ++
Sbjct: 554  IIRELINNSRLDQVM 568


>ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
          Length = 711

 Score =  456 bits (1172), Expect = e-126
 Identities = 232/369 (62%), Positives = 288/369 (78%), Gaps = 1/369 (0%)
 Frame = +3

Query: 3    SIQVLDRVGRHNFPEKILTKSHGFNLLKVLNGGSIGGDESLYHVN-NEKVLPDDHFHHRS 179
            +I VLD+VG+   PEKILT+S+G N L+ +  GSI  +E+  HVN N +V+P+ HF  R 
Sbjct: 293  AIHVLDKVGKMTIPEKILTRSNGLNSLRTIKFGSIRENEAGTHVNQNGRVIPNGHFRQRL 352

Query: 180  PILNSRSFQLDDQTSPGSSPDSVDLKFYNLRSQSPKYNSLDEVMGRIYLIAKDQHGCRFL 359
                +   QLD   +   S D+  LK   LR Q  KYNS+DEV+GRIY ++KDQ+GCRFL
Sbjct: 353  SSPTAGHLQLDSLCTWSLSTDTAHLKTNILRPQPQKYNSVDEVVGRIYHMSKDQNGCRFL 412

Query: 360  QKKFTEGCAEDVDKIFTEIIGHIVELMTDPFGNYLVQKLLEVCTKDQKNQILHAITRKPG 539
            Q+KFT+G  EDV KIF EII HIVELMTDPFGNYLVQKLLEVCT+DQ+ QILHAITR+ G
Sbjct: 413  QRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTEDQQMQILHAITRRAG 472

Query: 540  DLVRISLDMHGTRAVQKVIETLRSPEQFSLVVSSLKPGIVNLMKDTNGNHVAQRCLQHLL 719
            DLVRIS +MHGTRAVQKVIETLR+ EQFS++VSSLKPGIV L+KD NGNHVAQ CLQ+L+
Sbjct: 473  DLVRISCNMHGTRAVQKVIETLRTSEQFSMIVSSLKPGIVTLIKDMNGNHVAQCCLQNLM 532

Query: 720  PEYKEYLFEDAIAHCSKLAKDRHACCVLQKCLTHCDGEHRRRLVSGITSDALSLSQNQYG 899
            PEY+E+LFE AI +C +LA DRH CCVLQKCL H   E R R++  ITS+AL LSQ+ +G
Sbjct: 533  PEYREFLFEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRIIYEITSNALILSQDPFG 592

Query: 900  NYVVQFVFELQLPWVTIGVLDKLEGSYGYLSMQKYSSNVVEKCLKFAGEDRRPRIVQELV 1079
            NYVVQ+VFE   PW  + +LD+LEG+YG LS+QKYSSNVVEKCL+ AG++ R  I+QEL+
Sbjct: 593  NYVVQYVFE--FPWAIVDILDQLEGNYGDLSLQKYSSNVVEKCLQHAGDEHRHCIIQELI 650

Query: 1080 SDSRLDQIL 1106
            ++ R+DQI+
Sbjct: 651  NNPRIDQIM 659


>emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
          Length = 1051

 Score =  453 bits (1165), Expect = e-125
 Identities = 231/369 (62%), Positives = 287/369 (77%), Gaps = 1/369 (0%)
 Frame = +3

Query: 3    SIQVLDRVGRHNFPEKILTKSHGFNLLKVLNGGSIGGDESLYHVN-NEKVLPDDHFHHRS 179
            +I VLD+VG+   PEKILT+S+G N L+ +  GSI  +E+  HVN N +V+P+ HF  R 
Sbjct: 334  AIHVLDKVGKMTIPEKILTRSNGLNSLRTIKFGSIRENEAGTHVNQNGRVIPNGHFRQRL 393

Query: 180  PILNSRSFQLDDQTSPGSSPDSVDLKFYNLRSQSPKYNSLDEVMGRIYLIAKDQHGCRFL 359
                +   QLD   +   S D+  LK   LR Q  KYNS+DEV+GRIY ++KDQ+GCRFL
Sbjct: 394  SSPTAGHLQLDSLCTWSLSTDTAHLKTNILRPQPQKYNSVDEVVGRIYHMSKDQNGCRFL 453

Query: 360  QKKFTEGCAEDVDKIFTEIIGHIVELMTDPFGNYLVQKLLEVCTKDQKNQILHAITRKPG 539
            Q+KFT+G  EDV KIF EII HIVELMTDPFGNYLVQKLLEVCT+DQ+ QILHAITR+ G
Sbjct: 454  QRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTEDQQMQILHAITRRAG 513

Query: 540  DLVRISLDMHGTRAVQKVIETLRSPEQFSLVVSSLKPGIVNLMKDTNGNHVAQRCLQHLL 719
            DLVRIS +MHGTRAVQKVIETLR+ EQFS++VSSLKPGIV L+KD NGNHVAQ CLQ+L+
Sbjct: 514  DLVRISCNMHGTRAVQKVIETLRTSEQFSMIVSSLKPGIVTLIKDMNGNHVAQCCLQNLM 573

Query: 720  PEYKEYLFEDAIAHCSKLAKDRHACCVLQKCLTHCDGEHRRRLVSGITSDALSLSQNQYG 899
            PEY+E+L E AI +C +LA DRH CCVLQKCL H   E R R++  ITS+AL LSQ+ +G
Sbjct: 574  PEYREFLXEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRIIYEITSNALILSQDPFG 633

Query: 900  NYVVQFVFELQLPWVTIGVLDKLEGSYGYLSMQKYSSNVVEKCLKFAGEDRRPRIVQELV 1079
            NYVVQ+VFE   PW  + +LD+LEG+YG LS+QKYSSNVVEKCL+ AG++ R  I+QEL+
Sbjct: 634  NYVVQYVFE--FPWAIVDILDQLEGNYGDLSLQKYSSNVVEKCLQHAGDEHRHCIIQELI 691

Query: 1080 SDSRLDQIL 1106
            ++ R+DQI+
Sbjct: 692  NNPRIDQIM 700



 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
 Frame = +3

Query: 327 IAKDQHGCRFLQKKFTEGCAEDVDKIFTEIIGHIVELMTDPFGNYLVQKLLEVCTKDQKN 506
           +A D+HGC  LQK       E  D+I  EI  + + L  DPFGNY+VQ + E        
Sbjct: 591 LATDRHGCCVLQKCLGHSAVEQRDRIIYEITSNALILSQDPFGNYVVQYVFEFPWA---- 646

Query: 507 QILHAITRKPGDLVRISLDMHGTRAVQKVIETLRSPEQFSLVVSSLK-PGIVNLMKDTNG 683
            I+  + +  G+   +SL  + +  V+K ++      +  ++   +  P I  +M+D  G
Sbjct: 647 -IVDILDQLEGNYGDLSLQKYSSNVVEKCLQHAGDEHRHCIIQELINNPRIDQIMQDPYG 705

Query: 684 NHVAQRCLQH 713
           N+V Q  L +
Sbjct: 706 NYVIQAALNN 715


>emb|CBI16556.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  426 bits (1095), Expect = e-117
 Identities = 221/368 (60%), Positives = 273/368 (74%)
 Frame = +3

Query: 3    SIQVLDRVGRHNFPEKILTKSHGFNLLKVLNGGSIGGDESLYHVNNEKVLPDDHFHHRSP 182
            +I VLD+VG+   PEKILT+S+G N L+ +  GSI  +E+                    
Sbjct: 334  AIHVLDKVGKMTIPEKILTRSNGLNSLRTIKFGSIRENEA-------------------- 373

Query: 183  ILNSRSFQLDDQTSPGSSPDSVDLKFYNLRSQSPKYNSLDEVMGRIYLIAKDQHGCRFLQ 362
                     D   +   S D+  LK   LR Q  KYNS+DEV+GRIY ++KDQ+GCRFLQ
Sbjct: 374  ---------DSLCTWSLSTDTAHLKTNILRPQPQKYNSVDEVVGRIYHMSKDQNGCRFLQ 424

Query: 363  KKFTEGCAEDVDKIFTEIIGHIVELMTDPFGNYLVQKLLEVCTKDQKNQILHAITRKPGD 542
            +KFT+G  EDV KIF EII HIVELMTDPFGNYLVQKLLEVCT+DQ+ QILHAITR+ GD
Sbjct: 425  RKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTEDQQMQILHAITRRAGD 484

Query: 543  LVRISLDMHGTRAVQKVIETLRSPEQFSLVVSSLKPGIVNLMKDTNGNHVAQRCLQHLLP 722
            LVRIS +MHGTRAVQKVIETLR+ EQFS++VSSLKPGIV L+KD NGNHVAQ CLQ+L+P
Sbjct: 485  LVRISCNMHGTRAVQKVIETLRTSEQFSMIVSSLKPGIVTLIKDMNGNHVAQCCLQNLMP 544

Query: 723  EYKEYLFEDAIAHCSKLAKDRHACCVLQKCLTHCDGEHRRRLVSGITSDALSLSQNQYGN 902
            EY+E+LFE AI +C +LA DRH CCVLQKCL H   E R R++  ITS+AL LSQ+ +GN
Sbjct: 545  EYREFLFEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRIIYEITSNALILSQDPFGN 604

Query: 903  YVVQFVFELQLPWVTIGVLDKLEGSYGYLSMQKYSSNVVEKCLKFAGEDRRPRIVQELVS 1082
            YVVQ+VFE   PW  + +LD+LEG+YG LS+QKYSSNVVEKCL+ AG++ R  I+QEL++
Sbjct: 605  YVVQYVFE--FPWAIVDILDQLEGNYGDLSLQKYSSNVVEKCLQHAGDEHRHCIIQELIN 662

Query: 1083 DSRLDQIL 1106
            + R+DQI+
Sbjct: 663  NPRIDQIM 670