BLASTX nr result

ID: Coptis21_contig00022567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022567
         (1199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17340.3| unnamed protein product [Vitis vinifera]              306   5e-81
ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD...   301   2e-79
emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera]   286   7e-75
ref|XP_003538883.1| PREDICTED: uncharacterized protein LOC100808...   281   2e-73
ref|XP_002529640.1| conserved hypothetical protein [Ricinus comm...   265   2e-68

>emb|CBI17340.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  306 bits (785), Expect = 5e-81
 Identities = 150/278 (53%), Positives = 194/278 (69%), Gaps = 6/278 (2%)
 Frame = -1

Query: 1040 QDQPRAKWTLYLTKILADLMVEQVHQGNRQNNSFAKKAWQDMCDEFQRKTGLNWDKEQLK 861
            + QPRAKWT  LTKILADLMV+QV +GNRQNNSF KKAW+ MCD+F +KTGL WDKEQLK
Sbjct: 16   EQQPRAKWTASLTKILADLMVDQVRKGNRQNNSFGKKAWKYMCDDFFKKTGLKWDKEQLK 75

Query: 860  NRFGIMRRQYTSVKSLLETNDFTWDESLRMVKARGQVWDEYIKAHPDAEAIRANGCPYYK 681
            NR+ ++RRQY  VKSLL+ +DF WDE+  ++ A+ + WD YIK HPDAE++R+ GCP YK
Sbjct: 76   NRYAVLRRQYVIVKSLLDQSDFNWDENTGIITAKDEAWDNYIKEHPDAESMRSAGCPIYK 135

Query: 680  QLCVIF----GNEIFDQEGPNTADMPIDFGTPS--LFVKDELSPNTQEDENIPSEHTKCQ 519
            QLC IF     N   +Q   +   +P ++  P      ++E S  + +   +       Q
Sbjct: 136  QLCTIFSESGANGTNEQSAEHEEGIPYEYPCPEPLSMHREESSSESDDVAEMADGQDNFQ 195

Query: 518  SVTPPTSGRRKRNTTGIEDIMARAISDIAAASKLRISAVAHSVETFSIANCVKALDEIQG 339
            S  P     RKR   GI++++A AI ++AAASKLR +A+      FSI NCV+ALDEIQG
Sbjct: 196  STLPTGISSRKRGRRGIDNVIAGAILEMAAASKLRTAAIKQRNAKFSITNCVQALDEIQG 255

Query: 338  VDDRVYYAALDLFDKPNARETFMSLKAEKRFVWLKGKC 225
            VD+RVY+AALDLFD PNARE F+SLK++KR+ WL GKC
Sbjct: 256  VDERVYFAALDLFDNPNAREIFLSLKSDKRYTWLCGKC 293


>ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis vinifera]
          Length = 1013

 Score =  301 bits (772), Expect = 2e-79
 Identities = 154/294 (52%), Positives = 199/294 (67%), Gaps = 7/294 (2%)
 Frame = -1

Query: 1040 QDQPRAKWTLYLTKILADLMVEQVHQGNRQNNSFAKKAWQDMCDEFQRKTGLNWDKEQLK 861
            + QPRAKWT  LTKILADLMV+QV +GNRQNNSF KKAW+ MCD+F +KTGL WDKEQLK
Sbjct: 720  EQQPRAKWTASLTKILADLMVDQVRKGNRQNNSFGKKAWKYMCDDFFKKTGLKWDKEQLK 779

Query: 860  NRFGIMRRQYTSVKSLLETNDFTWDESLRMVKARGQVWDEYIKAHPDAEAIRANGCPYYK 681
            NR+ ++RRQY  VKSLL+ +DF WDE+  ++ A+ + WD YIK HPDAE++R+ GCP YK
Sbjct: 780  NRYAVLRRQYVIVKSLLDQSDFNWDENTGIITAKDEAWDNYIKEHPDAESMRSAGCPIYK 839

Query: 680  QLCVIF----GNEIFDQEGPNTADMPIDFGTPS--LFVKDELSPNTQEDENIPSEHTKCQ 519
            QLC IF     N   +Q   +   +P ++  P      ++E S  + +   +       Q
Sbjct: 840  QLCTIFSESGANGTNEQSAEHEEGIPYEYPCPEPLSMHREESSSESDDVAEMADGQDNFQ 899

Query: 518  SVTPPTSGRRKRNTTGIEDIMARAISDIAAASKLRISAVAHSVETFSIANCVKALDEIQG 339
            S  P     RKR   GI++++A AI ++AAASKLR +A+      FSI NCV+ALDEIQG
Sbjct: 900  STLPTGISSRKRGRRGIDNVIAGAILEMAAASKLRTAAIKQRNAKFSITNCVQALDEIQG 959

Query: 338  VDDRVYYAALDLFDKPNARETFMSLKAEKRFVWLKGKCNAPSRSIA*RS-SGLQ 180
            VD+RVY+AALDLFD PNARE F+SLK++KR+ WL   C   S S   R  SG+Q
Sbjct: 960  VDERVYFAALDLFDNPNAREIFLSLKSDKRYTWL---CGGKSLSTCIRKISGVQ 1010


>emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera]
          Length = 1125

 Score =  286 bits (732), Expect = 7e-75
 Identities = 154/341 (45%), Positives = 200/341 (58%), Gaps = 54/341 (15%)
 Frame = -1

Query: 1085 FSRKQVMASETNRPIQD---QPRAKWTLYLTKILADLMVEQVHQGNRQNNSFAKKAWQDM 915
            ++R     +   RP Q    QPRAKWT  LTKILADLMV+QV +GNRQNNSF KKAW+ M
Sbjct: 780  YNRMASRPTRLRRPYQQHEQQPRAKWTASLTKILADLMVDQVRKGNRQNNSFGKKAWKYM 839

Query: 914  CDEFQRKTGLNWDKEQLKNRFGIMRRQYTSVKSLLETNDFTWDESLRMVKARGQVWDEYI 735
            CD+F +KTGL WDKEQLKNR+ ++RRQY  VKSLL+ +DF WDE+  ++ A+ + WD YI
Sbjct: 840  CDDFFKKTGLKWDKEQLKNRYAVLRRQYVIVKSLLDQSDFNWDENTXIITAKDEAWDNYI 899

Query: 734  K---------------------------------------------AHPDAEAIRANGCP 690
            K                                              HPDAE++R+ GCP
Sbjct: 900  KKIHEARFINDILKHNIVGVPPRSGGSRLYYLFIVHHNVRMELTNQEHPDAESMRSAGCP 959

Query: 689  YYKQLCVIF----GNEIFDQEGPNTADMPIDFGTPS--LFVKDELSPNTQEDENIPSEHT 528
             YKQLC IF     N   +Q   +   +P ++  P      ++E S  + +   +     
Sbjct: 960  IYKQLCTIFSESGANGTNEQSAEHEEGIPYEYPCPEPLSMHREESSSESDDVAEMADGQD 1019

Query: 527  KCQSVTPPTSGRRKRNTTGIEDIMARAISDIAAASKLRISAVAHSVETFSIANCVKALDE 348
              QS  P     RKR   GI++++A AI ++AAASKLR +A+      FSI NCV+ALDE
Sbjct: 1020 NFQSTLPTGISSRKRGRRGIDNVIAGAILEMAAASKLRTAAIKQRNAKFSITNCVQALDE 1079

Query: 347  IQGVDDRVYYAALDLFDKPNARETFMSLKAEKRFVWLKGKC 225
            IQGVD+RVY+AALDLFD PNARE F+SLK++KR+ WL GKC
Sbjct: 1080 IQGVDERVYFAALDLFDNPNAREIFLSLKSDKRYXWLCGKC 1120


>ref|XP_003538883.1| PREDICTED: uncharacterized protein LOC100808608 [Glycine max]
          Length = 298

 Score =  281 bits (720), Expect = 2e-73
 Identities = 139/286 (48%), Positives = 191/286 (66%), Gaps = 10/286 (3%)
 Frame = -1

Query: 1040 QDQPRAKWTLYLTKILADLMVEQVHQGNRQNNSFAKKAWQDMCDEFQRKTGLNWDKEQLK 861
            QDQ RAKWT  LTKILA LMV+QVH+GN+ NN F KKAW+ +CDEF +KTGL WDKEQLK
Sbjct: 16   QDQSRAKWTTSLTKILAALMVDQVHKGNKHNNLFNKKAWKYICDEFYKKTGLKWDKEQLK 75

Query: 860  NRFGIMRRQYTSVKSLLETNDFTWDESLRMVKARGQVWDEYIKAHPDAEAIRANGCPYYK 681
            NR+ ++RRQY  VKS+L+ +DF+WDE+   + A  ++W EYIK HPDAE ++  GC  +K
Sbjct: 76   NRYSVLRRQYIIVKSILDQSDFSWDEATGSITANDEIWAEYIKKHPDAETVKTGGCSIFK 135

Query: 680  QLCVIFG-------NEIF---DQEGPNTADMPIDFGTPSLFVKDELSPNTQEDENIPSEH 531
            +LC IF        +E F   + E   T   P    T     ++E S  +Q++E+  ++ 
Sbjct: 136  ELCTIFSEPATNGKHEYFAASEGEHTYTTLCPEPLNTH----QEESSSESQDEEDATNDF 191

Query: 530  TKCQSVTPPTSGRRKRNTTGIEDIMARAISDIAAASKLRISAVAHSVETFSIANCVKALD 351
               Q  TP     RKR   GI+D +A AI ++A+ASK+R +A+   +  FS+A+C++ LD
Sbjct: 192  QTVQPTTPTAISTRKRGRKGIDDAIADAIFEMASASKMRAAAIEQQIARFSMADCIRDLD 251

Query: 350  EIQGVDDRVYYAALDLFDKPNARETFMSLKAEKRFVWLKGKCNAPS 213
             +QGVD ++Y+AAL+LFDKPNARE F+SLK +KR  WL+ KC   S
Sbjct: 252  LMQGVDQQLYFAALELFDKPNAREIFLSLKRDKRLTWLRRKCAVAS 297


>ref|XP_002529640.1| conserved hypothetical protein [Ricinus communis]
            gi|223530866|gb|EEF32727.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 338

 Score =  265 bits (676), Expect = 2e-68
 Identities = 149/331 (45%), Positives = 198/331 (59%), Gaps = 43/331 (12%)
 Frame = -1

Query: 1082 SRKQVMASETNRPIQDQPRAKWTLYLTKILADLMVEQVHQGNR-QNNSFAKKAWQDMCDE 906
            SR+QV    T +P + Q RA+WT  LTKI ADLMV+QVH+GN+  NNSF KKAW  MCDE
Sbjct: 8    SRQQV----TQQPPELQMRARWTTGLTKIFADLMVDQVHKGNKLSNNSFNKKAWNIMCDE 63

Query: 905  FQRKTGLNWDKEQLKNRFGIMRRQYTSVKSLLETNDFTWDESLRMVKARGQVWDEYIKAH 726
            F  KTGLNWDKEQLKNRF IMR+Q+  VKSLL  ++F  DES   + A  + W+ YIK H
Sbjct: 64   FYEKTGLNWDKEQLKNRFSIMRKQHAIVKSLLNQSEFHLDESTGNIIASNEAWNRYIKGH 123

Query: 725  PDAEAIRANGCPYYKQLCVIFGNEI----------FDQEGPNTA--------------DM 618
            PDAE IR +GCP YKQL VIF   +           ++E P++                 
Sbjct: 124  PDAEPIRGSGCPIYKQLGVIFSEPLTNGKHVQSVEHEEELPSSVFSKDPLDGIPEKELTT 183

Query: 617  PIDFGTPSLFVKDELSPNTQED-ENIPSE-----------------HTKCQSVTPPTSGR 492
             I F  P   +++E S +  ED +++  E                 H    ++    +  
Sbjct: 184  SISFKEPLTTIQEEESSSESEDGDDVADEQEIIQPLPVTHFTTTVMHNTTSAMDSTAAAN 243

Query: 491  RKRNTTGIEDIMARAISDIAAASKLRISAVAHSVETFSIANCVKALDEIQGVDDRVYYAA 312
            RKR   GI+D +A AI  +AAAS+LR +A+    E FS+A+C+K L+ IQG+++ VY+AA
Sbjct: 244  RKRGRKGIDDAIAGAILHMAAASRLRTAAIRKVSERFSVADCIKELNAIQGLEEGVYFAA 303

Query: 311  LDLFDKPNARETFMSLKAEKRFVWLKGKCNA 219
            LDLFD  NARE F+SLK +KR +WL+GKC +
Sbjct: 304  LDLFDNRNAREIFLSLKGDKRMIWLRGKCTS 334


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