BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022496
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like ...    54   5e-11
emb|CAN67117.1| hypothetical protein VITISV_026466 [Vitis vinifera]    54   5e-11
emb|CBI18610.3| unnamed protein product [Vitis vinifera]               54   5e-11
ref|XP_002310318.1| predicted protein [Populus trichocarpa] gi|2...    56   1e-10
ref|XP_002518295.1| DNA binding protein, putative [Ricinus commu...    59   2e-10

>ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
          Length = 365

 Score = 53.9 bits (128), Expect(2) = 5e-11
 Identities = 24/45 (53%), Positives = 36/45 (80%)
 Frame = +2

Query: 269 IHCVKRKRVLVKILAEIEKLNLSVISSSIMPFGISTIDITVMAQV 403
           IHC K+K  + K+L EIE+ +LSV++SS++PFG   +DITV+AQ+
Sbjct: 298 IHCKKQKGFVAKVLGEIEEHHLSVVNSSVLPFGKHAMDITVVAQM 342



 Score = 38.1 bits (87), Expect(2) = 5e-11
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = +3

Query: 42  KYVKHLQKRVEI*KNKLLTRPWNQ*SLMSRNF-RFLNPNEDDNYSSTDENFTSWSDEQHL 218
           KY+K LQ+RV     K L     + ++ S  F +    + DD  SS DENF    ++   
Sbjct: 229 KYLKQLQERV-----KSLEEQMKETTVESVVFIKKSQLSADDETSSCDENFDGCREDAVR 283

Query: 219 QIDARCSGKNVLIHI 263
            I+AR S KNVLI I
Sbjct: 284 DIEARVSDKNVLIRI 298


>emb|CAN67117.1| hypothetical protein VITISV_026466 [Vitis vinifera]
          Length = 365

 Score = 53.9 bits (128), Expect(2) = 5e-11
 Identities = 24/45 (53%), Positives = 36/45 (80%)
 Frame = +2

Query: 269 IHCVKRKRVLVKILAEIEKLNLSVISSSIMPFGISTIDITVMAQV 403
           IHC K+K  + K+L EIE+ +LSV++SS++PFG   +DITV+AQ+
Sbjct: 298 IHCKKQKGFVAKVLGEIEEHHLSVVNSSVLPFGKHAMDITVVAQM 342



 Score = 38.1 bits (87), Expect(2) = 5e-11
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = +3

Query: 42  KYVKHLQKRVEI*KNKLLTRPWNQ*SLMSRNF-RFLNPNEDDNYSSTDENFTSWSDEQHL 218
           KY+K LQ+RV     K L     + ++ S  F +    + DD  SS DENF    ++   
Sbjct: 229 KYLKQLQERV-----KSLEEQMKETTVESVVFIKKSQLSADDETSSCDENFDGCREDAVR 283

Query: 219 QIDARCSGKNVLIHI 263
            I+AR S KNVLI I
Sbjct: 284 DIEARVSDKNVLIRI 298


>emb|CBI18610.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score = 53.9 bits (128), Expect(2) = 5e-11
 Identities = 24/45 (53%), Positives = 36/45 (80%)
 Frame = +2

Query: 269 IHCVKRKRVLVKILAEIEKLNLSVISSSIMPFGISTIDITVMAQV 403
           IHC K+K  + K+L EIE+ +LSV++SS++PFG   +DITV+AQ+
Sbjct: 119 IHCKKQKGFVAKVLGEIEEHHLSVVNSSVLPFGKHAMDITVVAQM 163



 Score = 38.1 bits (87), Expect(2) = 5e-11
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = +3

Query: 42  KYVKHLQKRVEI*KNKLLTRPWNQ*SLMSRNF-RFLNPNEDDNYSSTDENFTSWSDEQHL 218
           KY+K LQ+RV     K L     + ++ S  F +    + DD  SS DENF    ++   
Sbjct: 50  KYLKQLQERV-----KSLEEQMKETTVESVVFIKKSQLSADDETSSCDENFDGCREDAVR 104

Query: 219 QIDARCSGKNVLIHI 263
            I+AR S KNVLI I
Sbjct: 105 DIEARVSDKNVLIRI 119


>ref|XP_002310318.1| predicted protein [Populus trichocarpa] gi|222853221|gb|EEE90768.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 55.8 bits (133), Expect(2) = 1e-10
 Identities = 26/50 (52%), Positives = 39/50 (78%)
 Frame = +2

Query: 254 DTYTDIHCVKRKRVLVKILAEIEKLNLSVISSSIMPFGISTIDITVMAQV 403
           D    IHC  ++ V +KIL+EIE L+LSV++SS++ FG ST+D+TV+AQ+
Sbjct: 284 DVLIRIHCKNQQGVGIKILSEIENLHLSVVNSSVLVFGNSTLDVTVIAQM 333



 Score = 35.0 bits (79), Expect(2) = 1e-10
 Identities = 23/79 (29%), Positives = 43/79 (54%)
 Frame = +3

Query: 27  LETLEKYVKHLQKRVEI*KNKLLTRPWNQ*SLMSRNFRFLNPNEDDNYSSTDENFTSWSD 206
           L+   KY+K LQ++++  +++  T+      L+ ++      + DD  +S+DENF     
Sbjct: 215 LDGAMKYMKQLQEQLKQLQDQTKTKTMESVVLLKKS----KLSVDDECTSSDENFDGLPG 270

Query: 207 EQHLQIDARCSGKNVLIHI 263
               +I+AR + K+VLI I
Sbjct: 271 SPLPEIEARTTDKDVLIRI 289


>ref|XP_002518295.1| DNA binding protein, putative [Ricinus communis]
           gi|223542515|gb|EEF44055.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 309

 Score = 58.5 bits (140), Expect(2) = 2e-10
 Identities = 27/45 (60%), Positives = 37/45 (82%)
 Frame = +2

Query: 269 IHCVKRKRVLVKILAEIEKLNLSVISSSIMPFGISTIDITVMAQV 403
           IHC KRK VL K +AEIEKL+LSV +SS++ FG S +D+T++AQ+
Sbjct: 242 IHCEKRKGVLEKTIAEIEKLHLSVTNSSVLTFGSSALDVTIIAQM 286



 Score = 31.6 bits (70), Expect(2) = 2e-10
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = +3

Query: 42  KYVKHLQKRVEI*KNKLLTRPWNQ*SLMSRNFRFLNPNEDDNYSSTDENFTSWS-DEQHL 218
           KY+K LQ+RV+  + +   +      ++ ++ R +   ED   SS+DE+F+    DE   
Sbjct: 171 KYLKQLQERVKTLEEQTKKKTMESVVIVKKS-RLVFGEEDT--SSSDESFSKGPFDEPLP 227

Query: 219 QIDARCSGKNVLIHI 263
           +I+AR   K+VLI I
Sbjct: 228 EIEARICDKHVLIRI 242