BLASTX nr result
ID: Coptis21_contig00022496
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00022496 (439 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like ... 54 5e-11 emb|CAN67117.1| hypothetical protein VITISV_026466 [Vitis vinifera] 54 5e-11 emb|CBI18610.3| unnamed protein product [Vitis vinifera] 54 5e-11 ref|XP_002310318.1| predicted protein [Populus trichocarpa] gi|2... 56 1e-10 ref|XP_002518295.1| DNA binding protein, putative [Ricinus commu... 59 2e-10 >ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera] Length = 365 Score = 53.9 bits (128), Expect(2) = 5e-11 Identities = 24/45 (53%), Positives = 36/45 (80%) Frame = +2 Query: 269 IHCVKRKRVLVKILAEIEKLNLSVISSSIMPFGISTIDITVMAQV 403 IHC K+K + K+L EIE+ +LSV++SS++PFG +DITV+AQ+ Sbjct: 298 IHCKKQKGFVAKVLGEIEEHHLSVVNSSVLPFGKHAMDITVVAQM 342 Score = 38.1 bits (87), Expect(2) = 5e-11 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Frame = +3 Query: 42 KYVKHLQKRVEI*KNKLLTRPWNQ*SLMSRNF-RFLNPNEDDNYSSTDENFTSWSDEQHL 218 KY+K LQ+RV K L + ++ S F + + DD SS DENF ++ Sbjct: 229 KYLKQLQERV-----KSLEEQMKETTVESVVFIKKSQLSADDETSSCDENFDGCREDAVR 283 Query: 219 QIDARCSGKNVLIHI 263 I+AR S KNVLI I Sbjct: 284 DIEARVSDKNVLIRI 298 >emb|CAN67117.1| hypothetical protein VITISV_026466 [Vitis vinifera] Length = 365 Score = 53.9 bits (128), Expect(2) = 5e-11 Identities = 24/45 (53%), Positives = 36/45 (80%) Frame = +2 Query: 269 IHCVKRKRVLVKILAEIEKLNLSVISSSIMPFGISTIDITVMAQV 403 IHC K+K + K+L EIE+ +LSV++SS++PFG +DITV+AQ+ Sbjct: 298 IHCKKQKGFVAKVLGEIEEHHLSVVNSSVLPFGKHAMDITVVAQM 342 Score = 38.1 bits (87), Expect(2) = 5e-11 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Frame = +3 Query: 42 KYVKHLQKRVEI*KNKLLTRPWNQ*SLMSRNF-RFLNPNEDDNYSSTDENFTSWSDEQHL 218 KY+K LQ+RV K L + ++ S F + + DD SS DENF ++ Sbjct: 229 KYLKQLQERV-----KSLEEQMKETTVESVVFIKKSQLSADDETSSCDENFDGCREDAVR 283 Query: 219 QIDARCSGKNVLIHI 263 I+AR S KNVLI I Sbjct: 284 DIEARVSDKNVLIRI 298 >emb|CBI18610.3| unnamed protein product [Vitis vinifera] Length = 186 Score = 53.9 bits (128), Expect(2) = 5e-11 Identities = 24/45 (53%), Positives = 36/45 (80%) Frame = +2 Query: 269 IHCVKRKRVLVKILAEIEKLNLSVISSSIMPFGISTIDITVMAQV 403 IHC K+K + K+L EIE+ +LSV++SS++PFG +DITV+AQ+ Sbjct: 119 IHCKKQKGFVAKVLGEIEEHHLSVVNSSVLPFGKHAMDITVVAQM 163 Score = 38.1 bits (87), Expect(2) = 5e-11 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Frame = +3 Query: 42 KYVKHLQKRVEI*KNKLLTRPWNQ*SLMSRNF-RFLNPNEDDNYSSTDENFTSWSDEQHL 218 KY+K LQ+RV K L + ++ S F + + DD SS DENF ++ Sbjct: 50 KYLKQLQERV-----KSLEEQMKETTVESVVFIKKSQLSADDETSSCDENFDGCREDAVR 104 Query: 219 QIDARCSGKNVLIHI 263 I+AR S KNVLI I Sbjct: 105 DIEARVSDKNVLIRI 119 >ref|XP_002310318.1| predicted protein [Populus trichocarpa] gi|222853221|gb|EEE90768.1| predicted protein [Populus trichocarpa] Length = 367 Score = 55.8 bits (133), Expect(2) = 1e-10 Identities = 26/50 (52%), Positives = 39/50 (78%) Frame = +2 Query: 254 DTYTDIHCVKRKRVLVKILAEIEKLNLSVISSSIMPFGISTIDITVMAQV 403 D IHC ++ V +KIL+EIE L+LSV++SS++ FG ST+D+TV+AQ+ Sbjct: 284 DVLIRIHCKNQQGVGIKILSEIENLHLSVVNSSVLVFGNSTLDVTVIAQM 333 Score = 35.0 bits (79), Expect(2) = 1e-10 Identities = 23/79 (29%), Positives = 43/79 (54%) Frame = +3 Query: 27 LETLEKYVKHLQKRVEI*KNKLLTRPWNQ*SLMSRNFRFLNPNEDDNYSSTDENFTSWSD 206 L+ KY+K LQ++++ +++ T+ L+ ++ + DD +S+DENF Sbjct: 215 LDGAMKYMKQLQEQLKQLQDQTKTKTMESVVLLKKS----KLSVDDECTSSDENFDGLPG 270 Query: 207 EQHLQIDARCSGKNVLIHI 263 +I+AR + K+VLI I Sbjct: 271 SPLPEIEARTTDKDVLIRI 289 >ref|XP_002518295.1| DNA binding protein, putative [Ricinus communis] gi|223542515|gb|EEF44055.1| DNA binding protein, putative [Ricinus communis] Length = 309 Score = 58.5 bits (140), Expect(2) = 2e-10 Identities = 27/45 (60%), Positives = 37/45 (82%) Frame = +2 Query: 269 IHCVKRKRVLVKILAEIEKLNLSVISSSIMPFGISTIDITVMAQV 403 IHC KRK VL K +AEIEKL+LSV +SS++ FG S +D+T++AQ+ Sbjct: 242 IHCEKRKGVLEKTIAEIEKLHLSVTNSSVLTFGSSALDVTIIAQM 286 Score = 31.6 bits (70), Expect(2) = 2e-10 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Frame = +3 Query: 42 KYVKHLQKRVEI*KNKLLTRPWNQ*SLMSRNFRFLNPNEDDNYSSTDENFTSWS-DEQHL 218 KY+K LQ+RV+ + + + ++ ++ R + ED SS+DE+F+ DE Sbjct: 171 KYLKQLQERVKTLEEQTKKKTMESVVIVKKS-RLVFGEEDT--SSSDESFSKGPFDEPLP 227 Query: 219 QIDARCSGKNVLIHI 263 +I+AR K+VLI I Sbjct: 228 EIEARICDKHVLIRI 242