BLASTX nr result
ID: Coptis21_contig00022482
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00022482 (438 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI30660.3| unnamed protein product [Vitis vinifera] 118 2e-38 ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi... 118 2e-38 emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera] 115 1e-37 ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|2... 103 2e-34 ref|XP_002522543.1| pentatricopeptide repeat-containing protein,... 100 4e-34 >emb|CBI30660.3| unnamed protein product [Vitis vinifera] Length = 598 Score = 118 bits (295), Expect(2) = 2e-38 Identities = 54/78 (69%), Positives = 68/78 (87%) Frame = +1 Query: 1 PASNDYISRPNSITLSSSLQHYIQSDSPSHGQKIHAHILKTGFQPNTNVSIKLLILYIRS 180 P ++DYIS P +I+LS +LQHYI SD PSHGQKIH+HILK GF+PNTNVSIKLLIL+++S Sbjct: 31 PPASDYISSPTAISLSVALQHYINSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKS 90 Query: 181 NCLLYARRVFDEMCKPTV 234 CL YAR++FDEM +PT+ Sbjct: 91 RCLRYARQLFDEMHQPTL 108 Score = 66.2 bits (160), Expect(2) = 2e-38 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 4/72 (5%) Frame = +3 Query: 234 SSYNSMIAGYLKHGQVEESVGLVRNLVLSNQRPDGFTLSTILK----LSRASVLRSRELG 401 S+YN MI+GYLKHGQ+EE + LV L S ++PDGFT S ILK S + LG Sbjct: 109 SAYNYMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKATGCASGGIFPLTYSLG 168 Query: 402 KQVHGMIVKCNV 437 K VH I++ NV Sbjct: 169 KVVHAQILRSNV 180 >ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Vitis vinifera] Length = 533 Score = 118 bits (295), Expect(2) = 2e-38 Identities = 54/78 (69%), Positives = 68/78 (87%) Frame = +1 Query: 1 PASNDYISRPNSITLSSSLQHYIQSDSPSHGQKIHAHILKTGFQPNTNVSIKLLILYIRS 180 P ++DYIS P +I+LS +LQHYI SD PSHGQKIH+HILK GF+PNTNVSIKLLIL+++S Sbjct: 31 PPASDYISSPTAISLSVALQHYINSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKS 90 Query: 181 NCLLYARRVFDEMCKPTV 234 CL YAR++FDEM +PT+ Sbjct: 91 RCLRYARQLFDEMHQPTL 108 Score = 66.2 bits (160), Expect(2) = 2e-38 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 4/72 (5%) Frame = +3 Query: 234 SSYNSMIAGYLKHGQVEESVGLVRNLVLSNQRPDGFTLSTILK----LSRASVLRSRELG 401 S+YN MI+GYLKHGQ+EE + LV L S ++PDGFT S ILK S + LG Sbjct: 109 SAYNYMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKATGCASGGIFPLTYSLG 168 Query: 402 KQVHGMIVKCNV 437 K VH I++ NV Sbjct: 169 KVVHAQILRSNV 180 >emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera] Length = 504 Score = 115 bits (287), Expect(2) = 1e-37 Identities = 53/78 (67%), Positives = 67/78 (85%) Frame = +1 Query: 1 PASNDYISRPNSITLSSSLQHYIQSDSPSHGQKIHAHILKTGFQPNTNVSIKLLILYIRS 180 P ++D IS P +I+LS +LQHYI SD PSHGQKIH+HILK GF+PNTNVSIKLLIL+++S Sbjct: 31 PPASDXISSPTAISLSVALQHYINSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKS 90 Query: 181 NCLLYARRVFDEMCKPTV 234 CL YAR++FDEM +PT+ Sbjct: 91 RCLRYARQLFDEMHQPTL 108 Score = 66.2 bits (160), Expect(2) = 1e-37 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 4/72 (5%) Frame = +3 Query: 234 SSYNSMIAGYLKHGQVEESVGLVRNLVLSNQRPDGFTLSTILK----LSRASVLRSRELG 401 S+YN MI+GYLKHGQ+EE + LV L S ++PDGFT S ILK S + LG Sbjct: 109 SAYNYMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKATGCASGGIFPLTYSLG 168 Query: 402 KQVHGMIVKCNV 437 K VH I++ NV Sbjct: 169 KVVHAQILRSNV 180 >ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|222848720|gb|EEE86267.1| predicted protein [Populus trichocarpa] Length = 530 Score = 103 bits (257), Expect(2) = 2e-34 Identities = 47/78 (60%), Positives = 60/78 (76%) Frame = +1 Query: 1 PASNDYISRPNSITLSSSLQHYIQSDSPSHGQKIHAHILKTGFQPNTNVSIKLLILYIRS 180 P DYI+ TLSS+LQHYI SD+P HGQKIH HILKTGF+PN N+SIKLLIL+++ Sbjct: 31 PNQEDYITHQTPTTLSSALQHYINSDTPFHGQKIHTHILKTGFRPNINISIKLLILHLKC 90 Query: 181 NCLLYARRVFDEMCKPTV 234 CL YA ++FDE+ + T+ Sbjct: 91 RCLKYAHQLFDELPQRTL 108 Score = 67.0 bits (162), Expect(2) = 2e-34 Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 2/70 (2%) Frame = +3 Query: 234 SSYNSMIAGYLKHGQVEESVGLVRNLVLSNQRPDGFTLSTILKLSR--ASVLRSRELGKQ 407 S+YN MI GYL+ G EES+ +VR L L +RPDGFT S ILK S A+V+ R G Sbjct: 109 SAYNYMIGGYLRQGLFEESISMVRRLDLDGERPDGFTFSMILKASTSGANVMLPRNTGGL 168 Query: 408 VHGMIVKCNV 437 VH I+K +V Sbjct: 169 VHAQILKLDV 178 >ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223538234|gb|EEF39843.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 530 Score = 99.8 bits (247), Expect(2) = 4e-34 Identities = 46/78 (58%), Positives = 62/78 (79%) Frame = +1 Query: 1 PASNDYISRPNSITLSSSLQHYIQSDSPSHGQKIHAHILKTGFQPNTNVSIKLLILYIRS 180 P + +Y+ R + LSS+LQ +I S++P HGQKIHAHI+KTGF PNTNVSIKLLILY++ Sbjct: 31 PPNEEYLFRSTAAALSSALQDHINSNTPFHGQKIHAHIVKTGFIPNTNVSIKLLILYLKC 90 Query: 181 NCLLYARRVFDEMCKPTV 234 CL YAR++FDE+ + T+ Sbjct: 91 GCLKYARQMFDELPQRTL 108 Score = 70.1 bits (170), Expect(2) = 4e-34 Identities = 39/70 (55%), Positives = 47/70 (67%), Gaps = 2/70 (2%) Frame = +3 Query: 234 SSYNSMIAGYLKHGQVEESVGLVRNLVLSNQRPDGFTLSTILKLSRA--SVLRSRELGKQ 407 S+YN +I GYLK G V++S+ LVR LVL QRPDGFT S ILK S + +V S LG Sbjct: 109 SAYNYLIGGYLKLGLVQDSMNLVRRLVLEGQRPDGFTYSMILKASTSGDNVTLSCNLGSV 168 Query: 408 VHGMIVKCNV 437 VHG I+K V Sbjct: 169 VHGQILKSEV 178