BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022482
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30660.3| unnamed protein product [Vitis vinifera]              118   2e-38
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...   118   2e-38
emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]   115   1e-37
ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-34
ref|XP_002522543.1| pentatricopeptide repeat-containing protein,...   100   4e-34

>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score =  118 bits (295), Expect(2) = 2e-38
 Identities = 54/78 (69%), Positives = 68/78 (87%)
 Frame = +1

Query: 1   PASNDYISRPNSITLSSSLQHYIQSDSPSHGQKIHAHILKTGFQPNTNVSIKLLILYIRS 180
           P ++DYIS P +I+LS +LQHYI SD PSHGQKIH+HILK GF+PNTNVSIKLLIL+++S
Sbjct: 31  PPASDYISSPTAISLSVALQHYINSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKS 90

Query: 181 NCLLYARRVFDEMCKPTV 234
            CL YAR++FDEM +PT+
Sbjct: 91  RCLRYARQLFDEMHQPTL 108



 Score = 66.2 bits (160), Expect(2) = 2e-38
 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
 Frame = +3

Query: 234 SSYNSMIAGYLKHGQVEESVGLVRNLVLSNQRPDGFTLSTILK----LSRASVLRSRELG 401
           S+YN MI+GYLKHGQ+EE + LV  L  S ++PDGFT S ILK     S      +  LG
Sbjct: 109 SAYNYMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKATGCASGGIFPLTYSLG 168

Query: 402 KQVHGMIVKCNV 437
           K VH  I++ NV
Sbjct: 169 KVVHAQILRSNV 180


>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial [Vitis vinifera]
          Length = 533

 Score =  118 bits (295), Expect(2) = 2e-38
 Identities = 54/78 (69%), Positives = 68/78 (87%)
 Frame = +1

Query: 1   PASNDYISRPNSITLSSSLQHYIQSDSPSHGQKIHAHILKTGFQPNTNVSIKLLILYIRS 180
           P ++DYIS P +I+LS +LQHYI SD PSHGQKIH+HILK GF+PNTNVSIKLLIL+++S
Sbjct: 31  PPASDYISSPTAISLSVALQHYINSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKS 90

Query: 181 NCLLYARRVFDEMCKPTV 234
            CL YAR++FDEM +PT+
Sbjct: 91  RCLRYARQLFDEMHQPTL 108



 Score = 66.2 bits (160), Expect(2) = 2e-38
 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
 Frame = +3

Query: 234 SSYNSMIAGYLKHGQVEESVGLVRNLVLSNQRPDGFTLSTILK----LSRASVLRSRELG 401
           S+YN MI+GYLKHGQ+EE + LV  L  S ++PDGFT S ILK     S      +  LG
Sbjct: 109 SAYNYMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKATGCASGGIFPLTYSLG 168

Query: 402 KQVHGMIVKCNV 437
           K VH  I++ NV
Sbjct: 169 KVVHAQILRSNV 180


>emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]
          Length = 504

 Score =  115 bits (287), Expect(2) = 1e-37
 Identities = 53/78 (67%), Positives = 67/78 (85%)
 Frame = +1

Query: 1   PASNDYISRPNSITLSSSLQHYIQSDSPSHGQKIHAHILKTGFQPNTNVSIKLLILYIRS 180
           P ++D IS P +I+LS +LQHYI SD PSHGQKIH+HILK GF+PNTNVSIKLLIL+++S
Sbjct: 31  PPASDXISSPTAISLSVALQHYINSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKS 90

Query: 181 NCLLYARRVFDEMCKPTV 234
            CL YAR++FDEM +PT+
Sbjct: 91  RCLRYARQLFDEMHQPTL 108



 Score = 66.2 bits (160), Expect(2) = 1e-37
 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
 Frame = +3

Query: 234 SSYNSMIAGYLKHGQVEESVGLVRNLVLSNQRPDGFTLSTILK----LSRASVLRSRELG 401
           S+YN MI+GYLKHGQ+EE + LV  L  S ++PDGFT S ILK     S      +  LG
Sbjct: 109 SAYNYMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKATGCASGGIFPLTYSLG 168

Query: 402 KQVHGMIVKCNV 437
           K VH  I++ NV
Sbjct: 169 KVVHAQILRSNV 180


>ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|222848720|gb|EEE86267.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  103 bits (257), Expect(2) = 2e-34
 Identities = 47/78 (60%), Positives = 60/78 (76%)
 Frame = +1

Query: 1   PASNDYISRPNSITLSSSLQHYIQSDSPSHGQKIHAHILKTGFQPNTNVSIKLLILYIRS 180
           P   DYI+     TLSS+LQHYI SD+P HGQKIH HILKTGF+PN N+SIKLLIL+++ 
Sbjct: 31  PNQEDYITHQTPTTLSSALQHYINSDTPFHGQKIHTHILKTGFRPNINISIKLLILHLKC 90

Query: 181 NCLLYARRVFDEMCKPTV 234
            CL YA ++FDE+ + T+
Sbjct: 91  RCLKYAHQLFDELPQRTL 108



 Score = 67.0 bits (162), Expect(2) = 2e-34
 Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
 Frame = +3

Query: 234 SSYNSMIAGYLKHGQVEESVGLVRNLVLSNQRPDGFTLSTILKLSR--ASVLRSRELGKQ 407
           S+YN MI GYL+ G  EES+ +VR L L  +RPDGFT S ILK S   A+V+  R  G  
Sbjct: 109 SAYNYMIGGYLRQGLFEESISMVRRLDLDGERPDGFTFSMILKASTSGANVMLPRNTGGL 168

Query: 408 VHGMIVKCNV 437
           VH  I+K +V
Sbjct: 169 VHAQILKLDV 178


>ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538234|gb|EEF39843.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score = 99.8 bits (247), Expect(2) = 4e-34
 Identities = 46/78 (58%), Positives = 62/78 (79%)
 Frame = +1

Query: 1   PASNDYISRPNSITLSSSLQHYIQSDSPSHGQKIHAHILKTGFQPNTNVSIKLLILYIRS 180
           P + +Y+ R  +  LSS+LQ +I S++P HGQKIHAHI+KTGF PNTNVSIKLLILY++ 
Sbjct: 31  PPNEEYLFRSTAAALSSALQDHINSNTPFHGQKIHAHIVKTGFIPNTNVSIKLLILYLKC 90

Query: 181 NCLLYARRVFDEMCKPTV 234
            CL YAR++FDE+ + T+
Sbjct: 91  GCLKYARQMFDELPQRTL 108



 Score = 70.1 bits (170), Expect(2) = 4e-34
 Identities = 39/70 (55%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
 Frame = +3

Query: 234 SSYNSMIAGYLKHGQVEESVGLVRNLVLSNQRPDGFTLSTILKLSRA--SVLRSRELGKQ 407
           S+YN +I GYLK G V++S+ LVR LVL  QRPDGFT S ILK S +  +V  S  LG  
Sbjct: 109 SAYNYLIGGYLKLGLVQDSMNLVRRLVLEGQRPDGFTYSMILKASTSGDNVTLSCNLGSV 168

Query: 408 VHGMIVKCNV 437
           VHG I+K  V
Sbjct: 169 VHGQILKSEV 178