BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022467
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s...    80   2e-13
emb|CBI36309.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...    79   5e-13
emb|CBI33284.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...    77   1e-12

>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 239

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/74 (56%), Positives = 55/74 (74%)
 Frame = +1

Query: 1   GVWYTEEGKLDTDLIHGLKVLCKKLIVRENVATSESLTEFINKSGVVNVKCSKEQITEIL 180
           GVWY + G+LDTD I+ +K +C K I R+ VAT + + E+  KSGV NV+ + +QI EIL
Sbjct: 100 GVWYNQ-GRLDTDFINLVKDVCLKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEIL 158

Query: 181 RCLVLDNEIVEVKS 222
           R LVLD+EIVEVKS
Sbjct: 159 RTLVLDDEIVEVKS 172


>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/74 (54%), Positives = 53/74 (71%)
 Frame = +1

Query: 1   GVWYTEEGKLDTDLIHGLKVLCKKLIVRENVATSESLTEFINKSGVVNVKCSKEQITEIL 180
           G WY E G LDT+ I  LK  C K++ +  VAT+E ++E INK+G+   +CS +QI EIL
Sbjct: 189 GAWYVE-GNLDTEYIKILKETCVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEIL 247

Query: 181 RCLVLDNEIVEVKS 222
           R LVLDNEI+EV+S
Sbjct: 248 RALVLDNEIMEVRS 261


>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/74 (54%), Positives = 53/74 (71%)
 Frame = +1

Query: 1   GVWYTEEGKLDTDLIHGLKVLCKKLIVRENVATSESLTEFINKSGVVNVKCSKEQITEIL 180
           G WY E G LDT+ I  LK  C K++ +  VAT+E ++E INK+G+   +CS +QI EIL
Sbjct: 99  GAWYVE-GNLDTEYIKILKETCVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEIL 157

Query: 181 RCLVLDNEIVEVKS 222
           R LVLDNEI+EV+S
Sbjct: 158 RALVLDNEIMEVRS 171


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/74 (52%), Positives = 53/74 (71%)
 Frame = +1

Query: 1   GVWYTEEGKLDTDLIHGLKVLCKKLIVRENVATSESLTEFINKSGVVNVKCSKEQITEIL 180
           G WY E G LDT+ I  LK  C +++ +  VAT+E ++E INK+G+   +CS +QI EIL
Sbjct: 160 GAWYVE-GNLDTEYIKILKKTCVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEIL 218

Query: 181 RCLVLDNEIVEVKS 222
           R LVLDNEI+EV+S
Sbjct: 219 RALVLDNEIMEVRS 232


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/74 (52%), Positives = 53/74 (71%)
 Frame = +1

Query: 1   GVWYTEEGKLDTDLIHGLKVLCKKLIVRENVATSESLTEFINKSGVVNVKCSKEQITEIL 180
           G WY E G LDT+ I  LK  C +++ +  VAT+E ++E INK+G+   +CS +QI EIL
Sbjct: 99  GAWYVE-GNLDTEYIKILKETCVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEIL 157

Query: 181 RCLVLDNEIVEVKS 222
           R LVLDNEI+EV+S
Sbjct: 158 RALVLDNEIMEVRS 171