BLASTX nr result

ID: Coptis21_contig00022445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022445
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304013.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002336701.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002528279.1| conserved hypothetical protein [Ricinus comm...    62   5e-08
ref|XP_002323339.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
gb|ABK93789.1| unknown [Populus trichocarpa]                           62   6e-08

>ref|XP_002304013.1| predicted protein [Populus trichocarpa] gi|222841445|gb|EEE78992.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = -1

Query: 239 IVGGTGLFRFARGVVVANTYIFNSTTGDAVVEYNVSAIHY 120
           ++GG+GLFRFARG   ANTY FN+ TGDAVVEYNV  +HY
Sbjct: 154 VIGGSGLFRFARGYAQANTYSFNAKTGDAVVEYNVYVLHY 193


>ref|XP_002336701.1| predicted protein [Populus trichocarpa] gi|222836553|gb|EEE74960.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = -1

Query: 239 IVGGTGLFRFARGVVVANTYIFNSTTGDAVVEYNVSAIHY 120
           ++GG+GLFRFARG   ANTY FN+ TGDAVVEYNV  +HY
Sbjct: 156 VIGGSGLFRFARGYAQANTYSFNAKTGDAVVEYNVYVLHY 195


>ref|XP_002528279.1| conserved hypothetical protein [Ricinus communis]
           gi|223532316|gb|EEF34117.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -1

Query: 239 IVGGTGLFRFARGVVVANTYIFNSTTGDAVVEYNVSAIHY 120
           IV GTG+FR ARG  +  TYIFN+T+GDA+VEYNV+ +HY
Sbjct: 117 IVVGTGVFRLARGFAILKTYIFNATSGDAIVEYNVAVVHY 156


>ref|XP_002323339.1| predicted protein [Populus trichocarpa] gi|222867969|gb|EEF05100.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = -1

Query: 239 IVGGTGLFRFARGVVVANTYIFNSTTGDAVVEYNVSAIHY 120
           IVGG+GLFRFARG   A+T++F+ TTGDAVVEYNV   HY
Sbjct: 139 IVGGSGLFRFARGYAQASTHMFDRTTGDAVVEYNVYVFHY 178


>gb|ABK93789.1| unknown [Populus trichocarpa]
          Length = 194

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = -1

Query: 239 IVGGTGLFRFARGVVVANTYIFNSTTGDAVVEYNVSAIHY 120
           IVGG+GLFRFARG   A+T++F+ TTGDAVVEYNV   HY
Sbjct: 155 IVGGSGLFRFARGYAQASTHMFDRTTGDAVVEYNVYVFHY 194


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