BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022443
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vi...   492   e-137
ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricin...   475   e-131
ref|XP_002321158.1| predicted protein [Populus trichocarpa] gi|2...   469   e-130
ref|XP_004156084.1| PREDICTED: ribonuclease Z, chloroplastic-lik...   464   e-128
ref|XP_003519435.1| PREDICTED: ribonuclease Z, chloroplastic-lik...   463   e-128

>ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vitis vinifera]
            gi|297739240|emb|CBI28891.3| unnamed protein product
            [Vitis vinifera]
          Length = 354

 Score =  492 bits (1267), Expect = e-137
 Identities = 242/331 (73%), Positives = 279/331 (84%), Gaps = 1/331 (0%)
 Frame = -1

Query: 1142 TTRDEIQLPTLHNNRSIKNHTLYALRGSGFLSAVDRVIEEEE-YRKYRAQTNRKGVDLEG 966
            T +  + +P  H    I  H+    +GSG+LS + R IEEEE YRK RA+  R GVDLEG
Sbjct: 22   TPQPPLTIPKPHPKSYITAHSSRP-KGSGYLSLIGRAIEEEEEYRKARAEVARNGVDLEG 80

Query: 965  YVIEGVSIGGHETCIVVPRLNAAFDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYVATRG 786
            Y IEG+SIGGHETC+++P L +AFDIGRCPSRAIQQ+FLFITHAHLDHIGGLPMYVATRG
Sbjct: 81   YSIEGISIGGHETCVIIPELKSAFDIGRCPSRAIQQNFLFITHAHLDHIGGLPMYVATRG 140

Query: 785  LYSLKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYELRNDLVVRPFKT 606
            LY+LKPPTIFVPPCIKEDVEKLF+IHR +SQ           VGETYE+RN+LVVRPFKT
Sbjct: 141  LYNLKPPTIFVPPCIKEDVEKLFDIHRALSQVELKLDLVALDVGETYEMRNNLVVRPFKT 200

Query: 605  HHVIPSQGYVIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDAILSPEMAFTGDTTSDFL 426
            HHVIPSQGYVIY++RKKLKKQY HLKGKQIEKLK  G+EITD ILSPE+AFTGDT SDF+
Sbjct: 201  HHVIPSQGYVIYTVRKKLKKQYIHLKGKQIEKLKNSGIEITDTILSPEVAFTGDTRSDFM 260

Query: 425  LDPRNADALRAKILITEATFLDGGISIEHARQHGHTHLFELIEHAKWMRNEAILLTHFSS 246
            L+PRNADALRAK+LITEATFLD GISI+HAR+HGHTHLFE+IE+A+W+RN+A+LLTHFSS
Sbjct: 261  LEPRNADALRAKVLITEATFLDNGISIDHAREHGHTHLFEIIENAEWIRNKAVLLTHFSS 320

Query: 245  RYKIQDIDEAVSKLQQKVPGKVVALKEGFKS 153
            RY I+DI +AVSKLQ KV  +VV L EGFKS
Sbjct: 321  RYHIEDIRKAVSKLQSKVSARVVPLMEGFKS 351


>ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricinus communis]
            gi|223531595|gb|EEF33423.1| ribonuclease z, chloroplast,
            putative [Ricinus communis]
          Length = 361

 Score =  475 bits (1222), Expect = e-131
 Identities = 230/311 (73%), Positives = 267/311 (85%), Gaps = 1/311 (0%)
 Frame = -1

Query: 1073 ALRGSGFLSAVDRVIEEEE-YRKYRAQTNRKGVDLEGYVIEGVSIGGHETCIVVPRLNAA 897
            +L+ +G+LSA+ RVIEEEE YRK RA   RKG+DLEGY IEG+SIGG ETC+++P    A
Sbjct: 51   SLKSTGYLSAIGRVIEEEEEYRKARAAVIRKGIDLEGYSIEGLSIGGQETCLIIPEFKCA 110

Query: 896  FDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYVATRGLYSLKPPTIFVPPCIKEDVEKLF 717
            FDIGRCPSRAI Q+F+FITHAHLDHIGGLPMYVA+RGLY+LKPPT+FVPPCIKEDVEKLF
Sbjct: 111  FDIGRCPSRAIHQNFVFITHAHLDHIGGLPMYVASRGLYNLKPPTVFVPPCIKEDVEKLF 170

Query: 716  EIHRKMSQXXXXXXXXXXXVGETYELRNDLVVRPFKTHHVIPSQGYVIYSIRKKLKKQYT 537
            +IHR M Q           VGETYELRN++VVRPF+T HVIPSQGYVIYS+RKKLKKQYT
Sbjct: 171  DIHRSMGQVELNLELVALDVGETYELRNNVVVRPFRTQHVIPSQGYVIYSVRKKLKKQYT 230

Query: 536  HLKGKQIEKLKKQGVEITDAILSPEMAFTGDTTSDFLLDPRNADALRAKILITEATFLDG 357
            HLKGKQIEKLKK GVEITD +LSPE+AFTGDTT++++LDP NADALRAK+LITEATFLD 
Sbjct: 231  HLKGKQIEKLKKSGVEITDIMLSPEVAFTGDTTAEYMLDPHNADALRAKVLITEATFLDE 290

Query: 356  GISIEHARQHGHTHLFELIEHAKWMRNEAILLTHFSSRYKIQDIDEAVSKLQQKVPGKVV 177
            G SIEHARQHGHTHL E+IE+A+W+RN+++LLTHFSSRY ++DI +AV KLQ KV  KVV
Sbjct: 291  GFSIEHARQHGHTHLLEIIENAEWIRNKSVLLTHFSSRYTVEDIRQAVLKLQSKVSAKVV 350

Query: 176  ALKEGFKSAES 144
             L EGFKS  S
Sbjct: 351  PLTEGFKSTYS 361


>ref|XP_002321158.1| predicted protein [Populus trichocarpa] gi|222861931|gb|EEE99473.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  469 bits (1208), Expect = e-130
 Identities = 237/336 (70%), Positives = 271/336 (80%), Gaps = 1/336 (0%)
 Frame = -1

Query: 1148 SFTTRDEIQLPTLHNNRSIKNHTLYALRGSGFLSAVDRVIEEEE-YRKYRAQTNRKGVDL 972
            + TTR+   LP    N+       + ++ S FLS + R IEEEE YRK RA   RKG+DL
Sbjct: 37   TLTTRNFHFLPLKIKNKP------FIVKASSFLSEIGRAIEEEEDYRKARAAVIRKGIDL 90

Query: 971  EGYVIEGVSIGGHETCIVVPRLNAAFDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYVAT 792
             GY IEG+SIGG ETCI++P    AFDIGRCP+RAI Q+F+FITHAHLDHIGGLPMYVA+
Sbjct: 91   GGYAIEGLSIGGQETCIIIPEFKCAFDIGRCPTRAIHQNFVFITHAHLDHIGGLPMYVAS 150

Query: 791  RGLYSLKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYELRNDLVVRPF 612
            RGLYSLKPPTIFVPPCIK+DVEKLF+IHR M Q           VGETYELRND+VVRPF
Sbjct: 151  RGLYSLKPPTIFVPPCIKDDVEKLFDIHRAMGQVELNFDLVALDVGETYELRNDVVVRPF 210

Query: 611  KTHHVIPSQGYVIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDAILSPEMAFTGDTTSD 432
            +T HVIPSQGYVIYS+RKKLKKQY HLKGKQIEKLKK GVEITD ILSPE+AFTGDTT++
Sbjct: 211  RTQHVIPSQGYVIYSVRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEVAFTGDTTAE 270

Query: 431  FLLDPRNADALRAKILITEATFLDGGISIEHARQHGHTHLFELIEHAKWMRNEAILLTHF 252
            ++LDPRNADALRAK+LITEATFLD   + EHARQ GHTHLFE+IE+AKW+R++AILLTHF
Sbjct: 271  YMLDPRNADALRAKVLITEATFLDEDFTTEHARQRGHTHLFEIIENAKWIRSKAILLTHF 330

Query: 251  SSRYKIQDIDEAVSKLQQKVPGKVVALKEGFKSAES 144
            SSRY I+DI EAVSKLQ +V  KVV L EGFKS  S
Sbjct: 331  SSRYSIEDIREAVSKLQSRVSAKVVPLTEGFKSMYS 366


>ref|XP_004156084.1| PREDICTED: ribonuclease Z, chloroplastic-like [Cucumis sativus]
          Length = 347

 Score =  464 bits (1194), Expect = e-128
 Identities = 232/328 (70%), Positives = 267/328 (81%), Gaps = 6/328 (1%)
 Frame = -1

Query: 1118 PTLHNNR----SIKNHT--LYALRGSGFLSAVDRVIEEEEYRKYRAQTNRKGVDLEGYVI 957
            P LH  +    ++++H   + + R SG LS +     EEEYR+ R+Q NRKGVDLEGY I
Sbjct: 21   PLLHTPKPHGVALQSHLNPVNSFRDSGLLSTIG---VEEEYRRARSQVNRKGVDLEGYSI 77

Query: 956  EGVSIGGHETCIVVPRLNAAFDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYVATRGLYS 777
            EG+S+GG ETC+++P    AFDIGRCPSRAIQQ+F+FITHAHLDHIGGLPMYVA+RGLYS
Sbjct: 78   EGISVGGQETCVIIPEFKCAFDIGRCPSRAIQQNFVFITHAHLDHIGGLPMYVASRGLYS 137

Query: 776  LKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYELRNDLVVRPFKTHHV 597
            L PPT+F+P  IKEDVEKL EIHR M Q           VGETYE+RN+LV R F+THHV
Sbjct: 138  LSPPTVFLPASIKEDVEKLLEIHRNMGQVELDVDLVALDVGETYEMRNNLVCRAFETHHV 197

Query: 596  IPSQGYVIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDAILSPEMAFTGDTTSDFLLDP 417
            IPSQGYVIYS+RKKLKKQY HLKGKQIEKLKK GVEITD ILSPE+AFTGDTT DF+LDP
Sbjct: 198  IPSQGYVIYSVRKKLKKQYMHLKGKQIEKLKKSGVEITDTILSPEVAFTGDTTPDFMLDP 257

Query: 416  RNADALRAKILITEATFLDGGISIEHARQHGHTHLFELIEHAKWMRNEAILLTHFSSRYK 237
            RNADALRAKILITEATFLD  +SIEHARQHGHTH+FE+IE+A+W+RN+AILLTHFSSRY 
Sbjct: 258  RNADALRAKILITEATFLDEAVSIEHARQHGHTHIFEIIENAQWIRNKAILLTHFSSRYH 317

Query: 236  IQDIDEAVSKLQQKVPGKVVALKEGFKS 153
            I+DI +AVSKLQ  V  KVV L EGFKS
Sbjct: 318  IEDIRKAVSKLQSNVTAKVVPLTEGFKS 345


>ref|XP_003519435.1| PREDICTED: ribonuclease Z, chloroplastic-like [Glycine max]
          Length = 354

 Score =  463 bits (1192), Expect = e-128
 Identities = 227/327 (69%), Positives = 267/327 (81%), Gaps = 2/327 (0%)
 Frame = -1

Query: 1118 PTLHNNRSIKNHTLYALRGS-GFLSAVDRVIE-EEEYRKYRAQTNRKGVDLEGYVIEGVS 945
            P  H+  S ++H    L+GS G+LS + + I+ EE+YR  R+Q NRK +DLEGY IEG+S
Sbjct: 28   PLYHHQVSTQSHVNNVLKGSSGYLSEISKAIDHEEQYRLARSQVNRKVLDLEGYSIEGLS 87

Query: 944  IGGHETCIVVPRLNAAFDIGRCPSRAIQQDFLFITHAHLDHIGGLPMYVATRGLYSLKPP 765
            +GG ETCI++P     FDIGRCPSRAIQQ+FLFITHAHLDHIGGLPMYVA+RGL++LKPP
Sbjct: 88   VGGQETCIIIPEFKCTFDIGRCPSRAIQQNFLFITHAHLDHIGGLPMYVASRGLFNLKPP 147

Query: 764  TIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYELRNDLVVRPFKTHHVIPSQ 585
            T+FVPPCIKEDVEKL +IHR M Q           VGETYE+RN+LVVRPF+T HVIPSQ
Sbjct: 148  TVFVPPCIKEDVEKLLDIHRTMGQVELNAEVVALDVGETYEIRNNLVVRPFRTQHVIPSQ 207

Query: 584  GYVIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDAILSPEMAFTGDTTSDFLLDPRNAD 405
            GYV+YSIRKKL+KQY HL GKQIEKLKK G+EITD ILSPE+AFTGDTTSDF+LDP NAD
Sbjct: 208  GYVVYSIRKKLRKQYAHLNGKQIEKLKKSGIEITDMILSPEVAFTGDTTSDFMLDPCNAD 267

Query: 404  ALRAKILITEATFLDGGISIEHARQHGHTHLFELIEHAKWMRNEAILLTHFSSRYKIQDI 225
            ALRAKILITEATFLD   SI+HARQHGHTHLFE+I +A+W+RN+A+LLTHFS RY I+DI
Sbjct: 268  ALRAKILITEATFLDDSFSIDHARQHGHTHLFEIIANAQWIRNKAVLLTHFSPRYTIEDI 327

Query: 224  DEAVSKLQQKVPGKVVALKEGFKSAES 144
             +A SKLQ ++  KVV L EGFKS  S
Sbjct: 328  RQAASKLQSRLSAKVVPLTEGFKSMYS 354