BLASTX nr result

ID: Coptis21_contig00022442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022442
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283955.1| PREDICTED: uncharacterized protein At3g17950...   134   1e-29
emb|CAN68754.1| hypothetical protein VITISV_035531 [Vitis vinifera]   133   2e-29
emb|CBI16149.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002313439.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_004163237.1| PREDICTED: uncharacterized protein At3g17950...   119   3e-25

>ref|XP_002283955.1| PREDICTED: uncharacterized protein At3g17950 [Vitis vinifera]
          Length = 212

 Score =  134 bits (336), Expect = 1e-29
 Identities = 77/148 (52%), Positives = 92/148 (62%), Gaps = 8/148 (5%)
 Frame = +3

Query: 3   STGSFFHDKSITLGSLIGVSSILELSRRSTRGRRADXXXXXXXXXXXXXGWFLSLCSK-- 176
           STGSFFHDKSITLGSLIGVSSI+EL+ RS RGRRA+              WF SLCS+  
Sbjct: 55  STGSFFHDKSITLGSLIGVSSIIELTGRSVRGRRAESLKGKRSYKSRT--WFFSLCSRAS 112

Query: 177 --AEDAISAPSLAHFLEVERRASNDYRSNQNSMIYDADEYTA----SEPNLLFINGHVAP 338
             AE+  + PSL HFL VERRA+N+YR N + + Y  DE       +EPN LF++G +AP
Sbjct: 113 TDAENVKNPPSLGHFLAVERRAANEYRRNHSPIDYGPDELALAQPNAEPNSLFMDGEIAP 172

Query: 339 PQSSPWLRSNDGERTNRSLANVGACGVP 422
           PQ S W  S+     NR L N    GVP
Sbjct: 173 PQPSSWSGSDAEMGQNRGLVNGSGHGVP 200


>emb|CAN68754.1| hypothetical protein VITISV_035531 [Vitis vinifera]
          Length = 242

 Score =  133 bits (334), Expect = 2e-29
 Identities = 77/148 (52%), Positives = 92/148 (62%), Gaps = 8/148 (5%)
 Frame = +3

Query: 3   STGSFFHDKSITLGSLIGVSSILELSRRSTRGRRADXXXXXXXXXXXXXGWFLSLCSK-- 176
           STGSFFHDKSITLGSLIGVSSI+EL+ RS RGRRA+              WF SLCS+  
Sbjct: 85  STGSFFHDKSITLGSLIGVSSIIELTGRSVRGRRAESLKGKRSYKSRT--WFFSLCSRAS 142

Query: 177 --AEDAISAPSLAHFLEVERRASNDYRSNQNSMIYDADEYTA----SEPNLLFINGHVAP 338
             AE+  + PSL HFL VERRA+N+YR N + + Y  DE       +EPN LF++G +AP
Sbjct: 143 TDAENVKNPPSLGHFLAVERRAANEYRRNHSPIDYGPDELALAQPNAEPNSLFMDGAIAP 202

Query: 339 PQSSPWLRSNDGERTNRSLANVGACGVP 422
           PQ S W  S+     NR L N    GVP
Sbjct: 203 PQPSSWSGSDAEMGQNRGLVNGSGHGVP 230


>emb|CBI16149.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  127 bits (319), Expect = 1e-27
 Identities = 72/136 (52%), Positives = 88/136 (64%), Gaps = 8/136 (5%)
 Frame = +3

Query: 3   STGSFFHDKSITLGSLIGVSSILELSRRSTRGRRADXXXXXXXXXXXXXGWFLSLCSK-- 176
           STGSFFHDKSITLGSLIGVSSI+EL+ RS RGRRA+              WF SLCS+  
Sbjct: 55  STGSFFHDKSITLGSLIGVSSIIELTGRSVRGRRAESLKGKRSYKSRT--WFFSLCSRAS 112

Query: 177 --AEDAISAPSLAHFLEVERRASNDYRSNQNSMIYDADEYTA----SEPNLLFINGHVAP 338
             AE+  + PSL HFL VERRA+N+YR N + + Y  DE       +EPN LF++G +AP
Sbjct: 113 TDAENVKNPPSLGHFLAVERRAANEYRRNHSPIDYGPDELALAQPNAEPNSLFMDGEIAP 172

Query: 339 PQSSPWLRSNDGERTN 386
           PQ S W   +  ER+N
Sbjct: 173 PQPSSWSGWSGVERSN 188


>ref|XP_002313439.1| predicted protein [Populus trichocarpa] gi|222849847|gb|EEE87394.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  120 bits (300), Expect = 2e-25
 Identities = 71/149 (47%), Positives = 88/149 (59%), Gaps = 9/149 (6%)
 Frame = +3

Query: 3   STGSFFHDKSITLGSLIGVSSILELSRRSTRGRRADXXXXXXXXXXXXXGWFLSLCSK-- 176
           STGSFFHDKSITLGSLIGVS+ILELSR+STR R+ +              W  SLCS+  
Sbjct: 52  STGSFFHDKSITLGSLIGVSNILELSRKSTRARKVEVVEDKKSCKSKT--WIFSLCSRDT 109

Query: 177 --AEDAISAPSLAHFLEVERRASNDYRSNQNSMIYDADE-----YTASEPNLLFINGHVA 335
             AE   + PSL HFL VERRAS++ R N + +I+   +        +EPN LF+NGHVA
Sbjct: 110 TDAEVVNNTPSLGHFLAVERRASSECRRNHDPIIHGPHDELELAQPVTEPNSLFVNGHVA 169

Query: 336 PPQSSPWLRSNDGERTNRSLANVGACGVP 422
           PP+ S    +    R N  L + G   VP
Sbjct: 170 PPRPSQSCSAEAERRGNEELEHCGEYAVP 198


>ref|XP_004163237.1| PREDICTED: uncharacterized protein At3g17950-like [Cucumis sativus]
          Length = 155

 Score =  119 bits (297), Expect = 3e-25
 Identities = 75/139 (53%), Positives = 89/139 (64%), Gaps = 11/139 (7%)
 Frame = +3

Query: 3   STGSFFHDKSITLGSLIGVSSILELSRRSTRGRRADXXXXXXXXXXXXXGWFLSLCSK-- 176
           STGSFFHDKSITLGSLIGVS+ILELSRRS RGRR +              WF SLCS+  
Sbjct: 4   STGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNTKSRT-WFFSLCSRES 62

Query: 177 --AEDAISAPSLAHFLEVERRASND-YRSNQNSMIYDADEYTAS----EPNLLFINGHVA 335
             A+   S PSL HFL  ERRA+++  R+NQ+ ++Y ADE   +    EPN LFING VA
Sbjct: 63  TDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVA 122

Query: 336 PPQSSPWLRSNDG--ERTN 386
           PPQ S    + +G  E TN
Sbjct: 123 PPQPSIGSETENGGTEPTN 141


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