BLASTX nr result

ID: Coptis21_contig00022428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022428
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302082.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002520967.1| hypothetical protein RCOM_0991200 [Ricinus c...   107   1e-21
ref|XP_002306805.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002274907.2| PREDICTED: uncharacterized protein LOC100266...    99   3e-19
ref|XP_004163564.1| PREDICTED: uncharacterized protein LOC101224...    90   2e-16

>ref|XP_002302082.1| predicted protein [Populus trichocarpa] gi|222843808|gb|EEE81355.1|
           predicted protein [Populus trichocarpa]
          Length = 789

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/77 (66%), Positives = 61/77 (79%)
 Frame = +3

Query: 3   RQIWSEFSRIREPSLAEDLSEVICGVLKKDLADETINRWEDCAIETSEVVLDIERSIFKD 182
           +QIWSEF RIRE   ++DL EVICGVL+KDLA +TIN W DC IE SE VLDIER +FKD
Sbjct: 699 QQIWSEFQRIRERDASDDLFEVICGVLRKDLAGDTINGWGDCPIEMSEAVLDIERLVFKD 758

Query: 183 LISDTIRDLASYAGKSR 233
           LI +TIRDLA++  K +
Sbjct: 759 LIGETIRDLAAFGRKGK 775


>ref|XP_002520967.1| hypothetical protein RCOM_0991200 [Ricinus communis]
           gi|223539804|gb|EEF41384.1| hypothetical protein
           RCOM_0991200 [Ricinus communis]
          Length = 773

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/75 (68%), Positives = 61/75 (81%)
 Frame = +3

Query: 3   RQIWSEFSRIREPSLAEDLSEVICGVLKKDLADETINRWEDCAIETSEVVLDIERSIFKD 182
           +QIWSEF RIRE   ++DL EVICG+LKKDLA ++IN W DC IE SE VLDIER IFKD
Sbjct: 686 QQIWSEFQRIRERDASDDLLEVICGMLKKDLAGDSINGWGDCPIEMSETVLDIERLIFKD 745

Query: 183 LISDTIRDLASYAGK 227
           LI +TI+DLA++ GK
Sbjct: 746 LIGETIQDLAAFTGK 760


>ref|XP_002306805.1| predicted protein [Populus trichocarpa] gi|222856254|gb|EEE93801.1|
           predicted protein [Populus trichocarpa]
          Length = 604

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3   RQIWSEFSRIREPSLAEDLSEVICGVLKKDLADETINRWEDCAIETSEVVLDIERSIFKD 182
           +Q+WSEF RIRE   ++DL EVICG+L+KDLA +TI  W DC IE SE VLDIER IFKD
Sbjct: 516 QQVWSEFQRIRERDASDDLVEVICGMLRKDLAGDTITGWGDCPIEMSEAVLDIERLIFKD 575

Query: 183 LISDTIRDLASYAGKSRGFEP---KKLLF 260
           LI +TIRDLA++  K     P   +KLLF
Sbjct: 576 LIGETIRDLAAFCRKGNQVVPVPRRKLLF 604


>ref|XP_002274907.2| PREDICTED: uncharacterized protein LOC100266517 [Vitis vinifera]
          Length = 800

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/77 (59%), Positives = 60/77 (77%)
 Frame = +3

Query: 3   RQIWSEFSRIREPSLAEDLSEVICGVLKKDLADETINRWEDCAIETSEVVLDIERSIFKD 182
           +QIW+EF RIRE   +EDL ++ICGVL+KDLA + I  W DC +E SE VL IER IF+D
Sbjct: 710 QQIWAEFIRIREREASEDLFDIICGVLRKDLAGDAITGWGDCHVEMSEAVLYIERLIFRD 769

Query: 183 LISDTIRDLASYAGKSR 233
           L+ +TIRDLA+++GK R
Sbjct: 770 LVGETIRDLAAFSGKVR 786


>ref|XP_004163564.1| PREDICTED: uncharacterized protein LOC101224478 [Cucumis sativus]
          Length = 771

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
 Frame = +3

Query: 3   RQIWSEFSRIR--EPSLAEDLSEVICGVLKKDLADETINRWEDCAIETSEVVLDIERSIF 176
           ++IWSEF R+R  E   +EDL EVIC VLKKDL  +  + W D  +ETS+ VLDIER IF
Sbjct: 678 QEIWSEFQRMRDRENDTSEDLFEVICSVLKKDLTRDAPSGWRDWPVETSQAVLDIERLIF 737

Query: 177 KDLISDTIRDLASYAGK 227
           KDLI +TIRDLA+  GK
Sbjct: 738 KDLIGETIRDLATITGK 754


Top