BLASTX nr result
ID: Coptis21_contig00022426
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00022426 (345 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK21647.1| unknown [Picea sitchensis] gi|116780944|gb|ABK218... 93 3e-17 ref|NP_001055710.1| Os05g0452600 [Oryza sativa Japonica Group] g... 91 8e-17 gb|ABK21866.1| unknown [Picea sitchensis] 91 1e-16 emb|CBI26135.3| unnamed protein product [Vitis vinifera] 91 1e-16 ref|XP_002278027.1| PREDICTED: 50S ribosomal protein L33 [Vitis ... 91 1e-16 >gb|ABK21647.1| unknown [Picea sitchensis] gi|116780944|gb|ABK21892.1| unknown [Picea sitchensis] Length = 57 Score = 92.8 bits (229), Expect = 3e-17 Identities = 43/52 (82%), Positives = 48/52 (92%) Frame = -3 Query: 343 GGSIFISLASAAGTGFFYVKRKNPRKMTEKLKFQKFDPRVNRHVLFTEAKMK 188 GGSI I L S+AGTGFFYVKRKNPRK+ EKL+F+K+DPRVNRHVLFTEAKMK Sbjct: 6 GGSILIRLVSSAGTGFFYVKRKNPRKLPEKLEFRKYDPRVNRHVLFTEAKMK 57 >ref|NP_001055710.1| Os05g0452600 [Oryza sativa Japonica Group] gi|226493452|ref|NP_001150073.1| LOC100283702 [Zea mays] gi|242088467|ref|XP_002440066.1| hypothetical protein SORBIDRAFT_09g025380 [Sorghum bicolor] gi|357133012|ref|XP_003568122.1| PREDICTED: 50S ribosomal protein L33-like [Brachypodium distachyon] gi|357136557|ref|XP_003569870.1| PREDICTED: 50S ribosomal protein L33-like [Brachypodium distachyon] gi|113579261|dbj|BAF17624.1| Os05g0452600 [Oryza sativa Japonica Group] gi|195629488|gb|ACG36385.1| 50S ribosomal protein L33 [Zea mays] gi|195636476|gb|ACG37706.1| 50S ribosomal protein L33 [Zea mays] gi|195637860|gb|ACG38398.1| 50S ribosomal protein L33 [Zea mays] gi|195656701|gb|ACG47818.1| 50S ribosomal protein L33 [Zea mays] gi|218196895|gb|EEC79322.1| hypothetical protein OsI_20170 [Oryza sativa Indica Group] gi|218197095|gb|EEC79522.1| hypothetical protein OsI_20605 [Oryza sativa Indica Group] gi|222632209|gb|EEE64341.1| hypothetical protein OsJ_19181 [Oryza sativa Japonica Group] gi|223975085|gb|ACN31730.1| unknown [Zea mays] gi|241945351|gb|EES18496.1| hypothetical protein SORBIDRAFT_09g025380 [Sorghum bicolor] gi|413946041|gb|AFW78690.1| hypothetical protein ZEAMMB73_147625 [Zea mays] gi|413946042|gb|AFW78691.1| hypothetical protein ZEAMMB73_147625 [Zea mays] gi|413946043|gb|AFW78692.1| hypothetical protein ZEAMMB73_147625 [Zea mays] gi|413946044|gb|AFW78693.1| hypothetical protein ZEAMMB73_147625 [Zea mays] Length = 57 Score = 91.3 bits (225), Expect = 8e-17 Identities = 42/50 (84%), Positives = 48/50 (96%) Frame = -3 Query: 337 SIFISLASAAGTGFFYVKRKNPRKMTEKLKFQKFDPRVNRHVLFTEAKMK 188 SIFI L SAAGTGFFYVKRKNPR++TEKL+F+K+DPRVN+HVLFTEAKMK Sbjct: 8 SIFIRLVSAAGTGFFYVKRKNPRRITEKLEFRKYDPRVNKHVLFTEAKMK 57 >gb|ABK21866.1| unknown [Picea sitchensis] Length = 57 Score = 90.9 bits (224), Expect = 1e-16 Identities = 42/52 (80%), Positives = 47/52 (90%) Frame = -3 Query: 343 GGSIFISLASAAGTGFFYVKRKNPRKMTEKLKFQKFDPRVNRHVLFTEAKMK 188 GGSI I L S+ GTGFFYVKRKNPRK+ EKL+F+K+DPRVNRHVLFTEAKMK Sbjct: 6 GGSILIRLVSSPGTGFFYVKRKNPRKLPEKLEFRKYDPRVNRHVLFTEAKMK 57 >emb|CBI26135.3| unnamed protein product [Vitis vinifera] Length = 101 Score = 90.5 bits (223), Expect = 1e-16 Identities = 42/50 (84%), Positives = 47/50 (94%) Frame = -3 Query: 337 SIFISLASAAGTGFFYVKRKNPRKMTEKLKFQKFDPRVNRHVLFTEAKMK 188 SIFI L S+AGTGFFYVK+KNPRKM EKL+F+K+DPRVNRHVLFTEAKMK Sbjct: 52 SIFIRLVSSAGTGFFYVKKKNPRKMLEKLEFRKYDPRVNRHVLFTEAKMK 101 >ref|XP_002278027.1| PREDICTED: 50S ribosomal protein L33 [Vitis vinifera] Length = 59 Score = 90.5 bits (223), Expect = 1e-16 Identities = 42/50 (84%), Positives = 47/50 (94%) Frame = -3 Query: 337 SIFISLASAAGTGFFYVKRKNPRKMTEKLKFQKFDPRVNRHVLFTEAKMK 188 SIFI L S+AGTGFFYVK+KNPRKM EKL+F+K+DPRVNRHVLFTEAKMK Sbjct: 10 SIFIRLVSSAGTGFFYVKKKNPRKMLEKLEFRKYDPRVNRHVLFTEAKMK 59