BLASTX nr result

ID: Coptis21_contig00022425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022425
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197397.1| protein FAR1-related sequence 12 [Arabidopsis t...    81   2e-13
ref|NP_566278.1| protein FAR1-related sequence 7 [Arabidopsis th...    80   4e-13
ref|XP_002445540.1| hypothetical protein SORBIDRAFT_07g021130 [S...    77   3e-12
ref|XP_004134160.1| PREDICTED: protein FAR1-RELATED SEQUENCE 7-l...    75   1e-11
ref|XP_003636629.1| FAR1-related protein [Medicago truncatula] g...    73   5e-11

>ref|NP_197397.1| protein FAR1-related sequence 12 [Arabidopsis thaliana]
           gi|122213828|sp|Q3E7I5.1|FRS12_ARATH RecName:
           Full=Protein FAR1-RELATED SEQUENCE 12
           gi|332005250|gb|AED92633.1| protein FAR1-related
           sequence 12 [Arabidopsis thaliana]
          Length = 788

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 36/89 (40%), Positives = 54/89 (60%)
 Frame = +1

Query: 1   GMLCRHVLKVFQVVDVFEIPAQYILERWIMNKRFVESTSNEAGAGCDDRNTISIWTLKGK 180
           G+LCRH+LKVF ++D+ E+P++YIL RW  N  F      E+G    D   + +W+L+  
Sbjct: 696 GLLCRHILKVFNLLDIRELPSRYILHRWTKNAEFGFVRDMESGVSAQDLKALMVWSLREA 755

Query: 181 THKLVEFGETSHERINFATSILQEGITKL 267
             K +EFG +S E+   A  I++EG  KL
Sbjct: 756 ASKYIEFGTSSLEKYKLAYEIMREGGKKL 784


>ref|NP_566278.1| protein FAR1-related sequence 7 [Arabidopsis thaliana]
           gi|75186401|sp|Q9M8J3.1|FRS7_ARATH RecName: Full=Protein
           FAR1-RELATED SEQUENCE 7
           gi|6862929|gb|AAF30318.1|AC018907_18 unknown protein
           [Arabidopsis thaliana]
           gi|13430716|gb|AAK25980.1|AF360270_1 unknown protein
           [Arabidopsis thaliana] gi|23297525|gb|AAN12887.1|
           unknown protein [Arabidopsis thaliana]
           gi|332640844|gb|AEE74365.1| protein FAR1-related
           sequence 7 [Arabidopsis thaliana]
          Length = 764

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 37/89 (41%), Positives = 54/89 (60%)
 Frame = +1

Query: 1   GMLCRHVLKVFQVVDVFEIPAQYILERWIMNKRFVESTSNEAGAGCDDRNTISIWTLKGK 180
           G+LCRH+LKVF ++D+ E+P++YIL RW  N  F      E+G    D   + IW+L+  
Sbjct: 672 GLLCRHILKVFNLLDIRELPSRYILHRWTKNAEFGFVRDVESGVTSQDLKALMIWSLREA 731

Query: 181 THKLVEFGETSHERINFATSILQEGITKL 267
             K +EFG +S E+   A  I++EG  KL
Sbjct: 732 ASKYIEFGTSSLEKYKLAYEIMREGGKKL 760


>ref|XP_002445540.1| hypothetical protein SORBIDRAFT_07g021130 [Sorghum bicolor]
           gi|241941890|gb|EES15035.1| hypothetical protein
           SORBIDRAFT_07g021130 [Sorghum bicolor]
          Length = 493

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
 Frame = +1

Query: 1   GMLCRHVLKVFQVVDVFEIPAQYILERWIMNKRFVESTSNEAGAGCDDRNTISIWTLKGK 180
           G+LC H+LKV  + D+ +IP +YI++RW   KR  +      G   ++ + +   TL   
Sbjct: 301 GILCSHILKVMMIKDISKIPDKYIIQRW--RKRETKMFFTSPGCLPEEASDLRYNTLSLM 358

Query: 181 THKLVEFGETSHERINFATSILQEGITKLSLISIPTVSVQPDNLGCSSIQAENIDEHTWM 360
             ++V  G  + E+ N+ +  ++    +L+ + +     Q         +A N DE+   
Sbjct: 359 AAEMVAEGSKTPEQYNYLSKEIERITGELNKMRLDKEKQQE--------KANNRDENI-Q 409

Query: 361 MDLNITVPDPPRVKLKSRPVSSRIKLGIL----QAQKKKRTCGTCKETGHYTRTCPKGS 525
            + NI + DP   K K R  +++  + ++    QA+KKK TC  CK +GH T TCP  S
Sbjct: 410 SNQNIELIDPDVAKTKGREKTNKRAMPMVEKLKQAKKKKYTCQNCKASGHNTSTCPAKS 468


>ref|XP_004134160.1| PREDICTED: protein FAR1-RELATED SEQUENCE 7-like [Cucumis sativus]
           gi|449521221|ref|XP_004167628.1| PREDICTED: protein
           FAR1-RELATED SEQUENCE 7-like [Cucumis sativus]
          Length = 761

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 34/89 (38%), Positives = 53/89 (59%)
 Frame = +1

Query: 1   GMLCRHVLKVFQVVDVFEIPAQYILERWIMNKRFVESTSNEAGAGCDDRNTISIWTLKGK 180
           G+LCRH+L+VFQ++ + EIP +YIL RW  N  +      ++  G  +  T+ +W+L+  
Sbjct: 669 GILCRHILRVFQILGISEIPPRYILHRWTRNAEYGTLQDMDSDGGPQELKTVMLWSLREA 728

Query: 181 THKLVEFGETSHERINFATSILQEGITKL 267
             K +E G TS E+   A  I++EG  KL
Sbjct: 729 ACKYIEAGATSLEKYKLAYEIMREGGRKL 757


>ref|XP_003636629.1| FAR1-related protein [Medicago truncatula]
           gi|355502564|gb|AES83767.1| FAR1-related protein
           [Medicago truncatula]
          Length = 347

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
 Frame = +1

Query: 1   GMLCRHVLKVFQVVDVFEIPAQYILERWIMNKRFVESTSNEAGAGCDDRNTISIWTLKGK 180
           G++CRHVL VF   +V+ +P+QY+L RW +N +  +S                    KG 
Sbjct: 144 GIICRHVLNVFIKENVYSLPSQYVLSRWTINAKKDKS--------------------KGL 183

Query: 181 THKLVEFGETSHERINFATSILQEGITKLSLISIPTVSVQPDNLGCSSIQAENIDEHTWM 360
             +  E G       +   SI+ E    L L    + S++  ++   +++ E+ +   W+
Sbjct: 184 AIEDHEEGRNQASSTSLFNSIMVE---SLELSERGSRSIKHHDIAIQALRKESQNLINWI 240

Query: 361 M----DLNITVPDPPRVKLKSRPVSSRIKLGILQAQKKKRTCGTCKETGHYTRTCP 516
           +    D  I + DPPRV  K RP + R+K  +   +K    C  CK  GH  R+CP
Sbjct: 241 LKISDDQTINLCDPPRVVPKGRPRTLRMKGSLELLKKGSMKCSYCKGKGHNKRSCP 296


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