BLASTX nr result
ID: Coptis21_contig00022414
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00022414 (1293 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27289.3| unnamed protein product [Vitis vinifera] 644 0.0 ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containi... 644 0.0 ref|XP_002512079.1| pentatricopeptide repeat-containing protein,... 612 e-173 ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|2... 612 e-173 ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containi... 572 e-161 >emb|CBI27289.3| unnamed protein product [Vitis vinifera] Length = 967 Score = 644 bits (1661), Expect = 0.0 Identities = 314/429 (73%), Positives = 377/429 (87%) Frame = +3 Query: 3 NSLIAHLSSLKDIHNLKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVK 182 NSLIAHL+SL D++NLKRAFA+ VFLLEKNPS+L++ TV TLL SM SANTAAPAFAL+ Sbjct: 100 NSLIAHLASLHDLYNLKRAFASAVFLLEKNPSLLDFGTVRTLLGSMNSANTAAPAFALIN 159 Query: 183 SMFKNRFFLPFSVWGGVLIDISRKNSNFVAFLRVFNENCKIALGEKLDFMKPDLNACNAA 362 MFKNR+F+PFS+WGGV+++I+R+N +FVAFLRVFNE C+IA+ EKL+ MKPDL+ACN A Sbjct: 160 CMFKNRYFMPFSMWGGVIVEITRRNRSFVAFLRVFNETCRIAIDEKLESMKPDLDACNVA 219 Query: 363 LEGCCCELESISDAESVLETMSVLGVRPDEASFGFLAYLYSVKGVEDKIVELERLMEGFG 542 LEGC +LES+S+AE V+E MSVLG++PDE+SFGFLAYLY++KG+E+KIVELE LM GFG Sbjct: 220 LEGCSQDLESVSEAEKVVEMMSVLGIQPDESSFGFLAYLYALKGLEEKIVELEGLMRGFG 279 Query: 543 VLSKRVFYSNLINGYVKSGSLQSVSEIIFHSLQEGDGHNVSFGEETYCVVVRGFLQNGNI 722 SK+V YS LIN YVKSG+L+ VS IF SL+E D +F EETYC VV+GFLQNG+I Sbjct: 280 FSSKKVIYSYLINAYVKSGNLEYVSRTIFRSLREDDEQGPNFSEETYCEVVKGFLQNGSI 339 Query: 723 KDLAKLIIESQKLESASIRIDSSVGFGIVTACVNLGLLDKAHSILDQMTAEGGFVGLGVY 902 KDLA LIIE+QKLE +SI +D S+G+GI++ACV+LG LDKAHSILD+M +G VGLGVY Sbjct: 340 KDLASLIIETQKLEPSSIAVDRSIGYGIISACVSLGFLDKAHSILDEMNVQGVSVGLGVY 399 Query: 903 TSIVKAYCKEQRTSEAAQLVMDISASGLQLDAGSYDTLIEASMSNQDFQSAFSLFRDMRE 1082 SI+KA+CKE RT+EAAQLV +IS+ GLQLDAGSYD LIEASMS+QDFQSAFSLFRDMRE Sbjct: 400 VSILKAFCKEHRTAEAAQLVTEISSLGLQLDAGSYDALIEASMSSQDFQSAFSLFRDMRE 459 Query: 1083 AKIPDLQMSYLTIMTGLTENHRPELMAAFLDEVVEDPRIEIGTHDWNSIIHAFCKAGRLE 1262 A++PD++ SYLT+MTGLTENHRPELMAAFLDE+VEDPR+E+GTHDWNSIIHAFCK GRLE Sbjct: 460 ARVPDMKGSYLTMMTGLTENHRPELMAAFLDEIVEDPRVEVGTHDWNSIIHAFCKVGRLE 519 Query: 1263 DARRTLRRM 1289 DARRT RRM Sbjct: 520 DARRTFRRM 528 >ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Vitis vinifera] Length = 655 Score = 644 bits (1661), Expect = 0.0 Identities = 314/429 (73%), Positives = 377/429 (87%) Frame = +3 Query: 3 NSLIAHLSSLKDIHNLKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVK 182 NSLIAHL+SL D++NLKRAFA+ VFLLEKNPS+L++ TV TLL SM SANTAAPAFAL+ Sbjct: 100 NSLIAHLASLHDLYNLKRAFASAVFLLEKNPSLLDFGTVRTLLGSMNSANTAAPAFALIN 159 Query: 183 SMFKNRFFLPFSVWGGVLIDISRKNSNFVAFLRVFNENCKIALGEKLDFMKPDLNACNAA 362 MFKNR+F+PFS+WGGV+++I+R+N +FVAFLRVFNE C+IA+ EKL+ MKPDL+ACN A Sbjct: 160 CMFKNRYFMPFSMWGGVIVEITRRNRSFVAFLRVFNETCRIAIDEKLESMKPDLDACNVA 219 Query: 363 LEGCCCELESISDAESVLETMSVLGVRPDEASFGFLAYLYSVKGVEDKIVELERLMEGFG 542 LEGC +LES+S+AE V+E MSVLG++PDE+SFGFLAYLY++KG+E+KIVELE LM GFG Sbjct: 220 LEGCSQDLESVSEAEKVVEMMSVLGIQPDESSFGFLAYLYALKGLEEKIVELEGLMRGFG 279 Query: 543 VLSKRVFYSNLINGYVKSGSLQSVSEIIFHSLQEGDGHNVSFGEETYCVVVRGFLQNGNI 722 SK+V YS LIN YVKSG+L+ VS IF SL+E D +F EETYC VV+GFLQNG+I Sbjct: 280 FSSKKVIYSYLINAYVKSGNLEYVSRTIFRSLREDDEQGPNFSEETYCEVVKGFLQNGSI 339 Query: 723 KDLAKLIIESQKLESASIRIDSSVGFGIVTACVNLGLLDKAHSILDQMTAEGGFVGLGVY 902 KDLA LIIE+QKLE +SI +D S+G+GI++ACV+LG LDKAHSILD+M +G VGLGVY Sbjct: 340 KDLASLIIETQKLEPSSIAVDRSIGYGIISACVSLGFLDKAHSILDEMNVQGVSVGLGVY 399 Query: 903 TSIVKAYCKEQRTSEAAQLVMDISASGLQLDAGSYDTLIEASMSNQDFQSAFSLFRDMRE 1082 SI+KA+CKE RT+EAAQLV +IS+ GLQLDAGSYD LIEASMS+QDFQSAFSLFRDMRE Sbjct: 400 VSILKAFCKEHRTAEAAQLVTEISSLGLQLDAGSYDALIEASMSSQDFQSAFSLFRDMRE 459 Query: 1083 AKIPDLQMSYLTIMTGLTENHRPELMAAFLDEVVEDPRIEIGTHDWNSIIHAFCKAGRLE 1262 A++PD++ SYLT+MTGLTENHRPELMAAFLDE+VEDPR+E+GTHDWNSIIHAFCK GRLE Sbjct: 460 ARVPDMKGSYLTMMTGLTENHRPELMAAFLDEIVEDPRVEVGTHDWNSIIHAFCKVGRLE 519 Query: 1263 DARRTLRRM 1289 DARRT RRM Sbjct: 520 DARRTFRRM 528 >ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223549259|gb|EEF50748.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 650 Score = 612 bits (1578), Expect = e-173 Identities = 303/429 (70%), Positives = 367/429 (85%) Frame = +3 Query: 3 NSLIAHLSSLKDIHNLKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVK 182 NSLI HLSSL+D NLKRAFA+V+F +EKNP L+++TV+++L SM AN+AAPAFALVK Sbjct: 95 NSLITHLSSLQDTLNLKRAFASVIFFMEKNPQSLDFETVQSVLESMKFANSAAPAFALVK 154 Query: 183 SMFKNRFFLPFSVWGGVLIDISRKNSNFVAFLRVFNENCKIALGEKLDFMKPDLNACNAA 362 MFK+R+F+PF +WGG++ IS+KN FVAFL+VF E+ +IA+ EKLDFMKPDL ACN A Sbjct: 155 CMFKHRYFMPFHLWGGLIGHISKKNGMFVAFLKVFEESYRIAVDEKLDFMKPDLGACNLA 214 Query: 363 LEGCCCELESISDAESVLETMSVLGVRPDEASFGFLAYLYSVKGVEDKIVELERLMEGFG 542 LE CC E+ES+SDA++V+E MSVLG++PDE SFGFLAYLY++KG++D+IVEL+ LMEGF Sbjct: 215 LECCCEEIESVSDADNVIEIMSVLGIKPDEMSFGFLAYLYALKGLQDRIVELKSLMEGFS 274 Query: 543 VLSKRVFYSNLINGYVKSGSLQSVSEIIFHSLQEGDGHNVSFGEETYCVVVRGFLQNGNI 722 VL+KR+FYSNLI GYVKSG+L+SVS I SL+E D N + EETYC VV+GFL++G++ Sbjct: 275 VLNKRLFYSNLIRGYVKSGNLESVSATIICSLREEDEKNYNINEETYCEVVKGFLKDGSL 334 Query: 723 KDLAKLIIESQKLESASIRIDSSVGFGIVTACVNLGLLDKAHSILDQMTAEGGFVGLGVY 902 K LA LIIE++KLE SI ID S+ FG++ ACVNLGL DKAHSILD+M A+GG VG GVY Sbjct: 335 KGLANLIIEARKLEPDSIEIDKSISFGVINACVNLGLSDKAHSILDEMDAKGGSVGFGVY 394 Query: 903 TSIVKAYCKEQRTSEAAQLVMDISASGLQLDAGSYDTLIEASMSNQDFQSAFSLFRDMRE 1082 I+KAYCKE RT+EA QLVM+IS GLQLDAGSYD LIEASM++QDFQSAF+LFRDMRE Sbjct: 395 VPILKAYCKEGRTAEATQLVMEISNLGLQLDAGSYDALIEASMTSQDFQSAFTLFRDMRE 454 Query: 1083 AKIPDLQMSYLTIMTGLTENHRPELMAAFLDEVVEDPRIEIGTHDWNSIIHAFCKAGRLE 1262 ++ PDL+ SYLTIMTGL ENHRPELMAAFLDEVVEDPRIE+ THDWNSIIHAFCKAGRLE Sbjct: 455 SRSPDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVKTHDWNSIIHAFCKAGRLE 514 Query: 1263 DARRTLRRM 1289 DA+RT RRM Sbjct: 515 DAKRTFRRM 523 >ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|222851159|gb|EEE88706.1| predicted protein [Populus trichocarpa] Length = 654 Score = 612 bits (1577), Expect = e-173 Identities = 299/430 (69%), Positives = 363/430 (84%) Frame = +3 Query: 3 NSLIAHLSSLKDIHNLKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVK 182 NSLI HLSSL D NLKRAFA++V+++EKNP L+++TV+ L SM ANTAAPAFAL+K Sbjct: 100 NSLITHLSSLNDTINLKRAFASIVYVIEKNPKSLDFETVQLFLGSMVRANTAAPAFALIK 159 Query: 183 SMFKNRFFLPFSVWGGVLIDISRKNSNFVAFLRVFNENCKIALGEKLDFMKPDLNACNAA 362 MFKNRFF+PF +WG +LI+ISRKN +AFL+VF E+C+IA+ EKLDFMKPD++ACN A Sbjct: 160 CMFKNRFFMPFRLWGDILIEISRKNDKVIAFLKVFEESCRIAIDEKLDFMKPDMDACNVA 219 Query: 363 LEGCCCELESISDAESVLETMSVLGVRPDEASFGFLAYLYSVKGVEDKIVELERLMEGFG 542 LEGCCCELES+S+AE V+ETMSVLG++PDE SFGFLAYLY++KG +DKI+EL LM GFG Sbjct: 220 LEGCCCELESVSEAEKVIETMSVLGIKPDELSFGFLAYLYALKGFQDKIIELNGLMSGFG 279 Query: 543 VLSKRVFYSNLINGYVKSGSLQSVSEIIFHSLQEGDGHNVSFGEETYCVVVRGFLQNGNI 722 +K++F+S LI GYVKSGS ++VSE I SL+E G +++F EETYC VV+GF+++G I Sbjct: 280 FSNKKLFFSYLIRGYVKSGSFEAVSETILRSLREQGGLDLNFSEETYCQVVKGFMKDGGI 339 Query: 723 KDLAKLIIESQKLESASIRIDSSVGFGIVTACVNLGLLDKAHSILDQMTAEGGFVGLGVY 902 K LA LIIE+QKLESA+I D S GFGI++ACVNL L DKAHSI+D+M A+GG VGLGV+ Sbjct: 340 KGLANLIIEAQKLESATIAADKSTGFGIISACVNLRLSDKAHSIVDEMDAQGGSVGLGVF 399 Query: 903 TSIVKAYCKEQRTSEAAQLVMDISASGLQLDAGSYDTLIEASMSNQDFQSAFSLFRDMRE 1082 I+KAYCKE RT+EA QLVMDIS GLQLD GSYD LIEASM++QDFQSAF+LFRDMRE Sbjct: 400 LPILKAYCKEYRTAEATQLVMDISNKGLQLDEGSYDALIEASMTSQDFQSAFTLFRDMRE 459 Query: 1083 AKIPDLQMSYLTIMTGLTENHRPELMAAFLDEVVEDPRIEIGTHDWNSIIHAFCKAGRLE 1262 I +L+ SYLTIMTGL E RPELMAAFLDE+VEDPR+E+ THDWNSIIHAFCKAGRLE Sbjct: 460 G-IAELKGSYLTIMTGLMEKQRPELMAAFLDEIVEDPRVEVKTHDWNSIIHAFCKAGRLE 518 Query: 1263 DARRTLRRMS 1292 DA+RT RRM+ Sbjct: 519 DAKRTFRRMT 528 >ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like [Cucumis sativus] gi|449517162|ref|XP_004165615.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like [Cucumis sativus] Length = 656 Score = 572 bits (1474), Expect = e-161 Identities = 280/429 (65%), Positives = 354/429 (82%) Frame = +3 Query: 3 NSLIAHLSSLKDIHNLKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVK 182 NSLIAHLSS+ D+HNLKRAFA+VVF++EK P +L++ +V+ LL SM ANTAAPA +L+K Sbjct: 102 NSLIAHLSSIGDVHNLKRAFASVVFVIEKKPELLDFGSVKALLASMKCANTAAPALSLIK 161 Query: 183 SMFKNRFFLPFSVWGGVLIDISRKNSNFVAFLRVFNENCKIALGEKLDFMKPDLNACNAA 362 MFKNR F+PFSVWG L+DI R++ + + FLRVF ENC+IAL E+LDF+KPDL ACNAA Sbjct: 162 CMFKNRCFVPFSVWGKELVDICRQSGSLIPFLRVFEENCRIALDERLDFLKPDLIACNAA 221 Query: 363 LEGCCCELESISDAESVLETMSVLGVRPDEASFGFLAYLYSVKGVEDKIVELERLMEGFG 542 LEGCC ELES++DAE V+ETMS+L +RPDE SFG LAYLY++KG++ KI+ELE LM FG Sbjct: 222 LEGCCHELESVTDAEKVIETMSLLYLRPDEVSFGALAYLYALKGLDQKIIELEVLMGSFG 281 Query: 543 VLSKRVFYSNLINGYVKSGSLQSVSEIIFHSLQEGDGHNVSFGEETYCVVVRGFLQNGNI 722 K +F+SNL++GYV + + +VS+ + SL++ G +V FGE+TY +V+GF+Q+GN+ Sbjct: 282 FTCKDLFFSNLVSGYVNASNFAAVSKTMLRSLKDECGSHVHFGEKTYLEMVKGFIQSGNL 341 Query: 723 KDLAKLIIESQKLESASIRIDSSVGFGIVTACVNLGLLDKAHSILDQMTAEGGFVGLGVY 902 K+L+ LII++Q LES+S +D S+GFGI+ ACVN+G LDKA ILD+M ++G +GLGVY Sbjct: 342 KELSALIIDAQNLESSS-AVDGSIGFGIINACVNIGWLDKAQYILDEMNSQGVSLGLGVY 400 Query: 903 TSIVKAYCKEQRTSEAAQLVMDISASGLQLDAGSYDTLIEASMSNQDFQSAFSLFRDMRE 1082 I+KAY KE RT+ A QL+MDIS+SG+QLDA +YD LIEASMSNQDFQSAF+LFR MRE Sbjct: 401 LPILKAYRKEHRTAAATQLIMDISSSGIQLDAENYDALIEASMSNQDFQSAFTLFRSMRE 460 Query: 1083 AKIPDLQMSYLTIMTGLTENHRPELMAAFLDEVVEDPRIEIGTHDWNSIIHAFCKAGRLE 1262 + D + SYLTIMTGL ENHRPELMAAFLDE+VEDP +E+GTHDWNSIIHAFCKAGRLE Sbjct: 461 TRKSDTKASYLTIMTGLMENHRPELMAAFLDEIVEDPLVEVGTHDWNSIIHAFCKAGRLE 520 Query: 1263 DARRTLRRM 1289 DARRT RRM Sbjct: 521 DARRTYRRM 529