BLASTX nr result
ID: Coptis21_contig00022407
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00022407 (626 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum] 308 5e-82 ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinu... 306 2e-81 ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vin... 296 2e-78 ref|XP_002306988.1| glutamate-gated kainate-type ion channel rec... 296 2e-78 emb|CAN72607.1| hypothetical protein VITISV_021339 [Vitis vinifera] 296 2e-78 >dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum] Length = 808 Score = 308 bits (789), Expect = 5e-82 Identities = 142/210 (67%), Positives = 171/210 (81%), Gaps = 2/210 (0%) Frame = -2 Query: 625 LEGGNLHLEAMSVFDGGKFLLNNILQSRLNGLTGPVEFNSDRSLIRPAYDVINILGTGFR 446 +EG NLHLEAMS+FDGG LL N+L+S GLTGP +F+ D+SLIRPAYD+IN++GTGFR Sbjct: 356 VEGSNLHLEAMSIFDGGPLLLKNLLESDFVGLTGPFKFSPDKSLIRPAYDIINVIGTGFR 415 Query: 445 GIGYWSNYSGLSVITPETLYMRPRNRS--NQQLSPVIWPGETIVKPRGWAFPSGGKELKI 272 +GYWSNYSGLS++ PET Y RP NRS NQ+L V+WPG + KPRGW FP+ GK+LKI Sbjct: 416 RVGYWSNYSGLSILPPETYYSRPPNRSSTNQKLYSVVWPGNNVQKPRGWVFPNNGKQLKI 475 Query: 271 GVPNRASFREFVTEVNGTDGVKGFCIDVFTAAVKLLPYGVPFKFEPYGDGHQNPNYNELV 92 GVP R S+REFV+++ GT+ KGFCIDVFTAAV LLPY VP KF PYG+GH+NP+Y ++V Sbjct: 476 GVPIRVSYREFVSQIPGTNNFKGFCIDVFTAAVNLLPYAVPHKFVPYGNGHENPSYTDMV 535 Query: 91 NLITNATFDAVVGDIAIVTNRTRIVDLTQP 2 LIT FD VVGDIAIVTNRTR+VD TQP Sbjct: 536 RLITIGKFDGVVGDIAIVTNRTRVVDFTQP 565 >ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinus communis] gi|223551404|gb|EEF52890.1| glutamate receptor 3 plant, putative [Ricinus communis] Length = 927 Score = 306 bits (784), Expect = 2e-81 Identities = 146/210 (69%), Positives = 174/210 (82%), Gaps = 2/210 (0%) Frame = -2 Query: 625 LEGGNLHLEAMSVFDGGKFLLNNILQSRLNGLTGPVEFNSDRSLIRPAYDVINILGTGFR 446 +EG NLHL+AMS+F+ G LL NILQS GLTG V+F+S +SLI PAYD+IN++GTGFR Sbjct: 351 VEGSNLHLDAMSLFNDGTHLLKNILQSDFVGLTGRVKFDSQKSLILPAYDIINVIGTGFR 410 Query: 445 GIGYWSNYSGLSVITPETLYMRPRNRS--NQQLSPVIWPGETIVKPRGWAFPSGGKELKI 272 IG+WSNYSGLS++ PETLY RP NRS NQQL VIWPGET++KPRGW FP+ GK+LKI Sbjct: 411 QIGFWSNYSGLSIVLPETLYTRPPNRSSANQQLQSVIWPGETLLKPRGWVFPNNGKQLKI 470 Query: 271 GVPNRASFREFVTEVNGTDGVKGFCIDVFTAAVKLLPYGVPFKFEPYGDGHQNPNYNELV 92 GVP R S++EFV++V GTD KGFCIDVFTAA+ LLPY VP++F PYGDG +NP+Y ELV Sbjct: 471 GVPIRVSYKEFVSQVRGTDIFKGFCIDVFTAAISLLPYAVPYQFIPYGDGKRNPSYTELV 530 Query: 91 NLITNATFDAVVGDIAIVTNRTRIVDLTQP 2 LIT + DAVVGDIAIVTNRT+IVD TQP Sbjct: 531 QLITAGSIDAVVGDIAIVTNRTKIVDFTQP 560 >ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vinifera] gi|297745576|emb|CBI40741.3| unnamed protein product [Vitis vinifera] Length = 934 Score = 296 bits (759), Expect = 2e-78 Identities = 142/207 (68%), Positives = 165/207 (79%), Gaps = 2/207 (0%) Frame = -2 Query: 616 GNLHLEAMSVFDGGKFLLNNILQSRLNGLTGPVEFNSDRSLIRPAYDVINILGTGFRGIG 437 G+ HLE M+VFDGG LLNNIL+S GLTGP +F SDRSL PA+D+IN++GTG+R IG Sbjct: 354 GSRHLEEMNVFDGGMLLLNNILKSNFVGLTGPFKFTSDRSLYAPAFDIINVIGTGYRQIG 413 Query: 436 YWSNYSGLSVITPETLYMRPRNRS--NQQLSPVIWPGETIVKPRGWAFPSGGKELKIGVP 263 YWSNYSGLS TPE LY +P NRS NQ+L V+WPGET+ KPRGW FP+ GK LKIGVP Sbjct: 414 YWSNYSGLSTETPEALYGKPPNRSSVNQRLYGVVWPGETLSKPRGWVFPNNGKLLKIGVP 473 Query: 262 NRASFREFVTEVNGTDGVKGFCIDVFTAAVKLLPYGVPFKFEPYGDGHQNPNYNELVNLI 83 NR S+REFV+ V GTD KGFCIDVFTAAV LLPY VPF++ GDGH+NPNY+ELV ++ Sbjct: 474 NRVSYREFVSRVRGTDMFKGFCIDVFTAAVTLLPYAVPFQYVSVGDGHKNPNYSELVRMV 533 Query: 82 TNATFDAVVGDIAIVTNRTRIVDLTQP 2 DAVVGDIAIVT+RTRIVD TQP Sbjct: 534 AEGELDAVVGDIAIVTSRTRIVDFTQP 560 >ref|XP_002306988.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222856437|gb|EEE93984.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 897 Score = 296 bits (759), Expect = 2e-78 Identities = 141/209 (67%), Positives = 169/209 (80%), Gaps = 2/209 (0%) Frame = -2 Query: 622 EGGNLHLEAMSVFDGGKFLLNNILQSRLNGLTGPVEFNSDRSLIRPAYDVINILGTGFRG 443 EG +LHLEA+S+FD GK LLNNILQS L GLTG ++F DRSLI PAYDV+N++GTG+R Sbjct: 343 EGSSLHLEAISIFDDGKLLLNNILQSDLVGLTGRIKFGIDRSLILPAYDVVNVIGTGYRR 402 Query: 442 IGYWSNYSGLSVITPETLYMRPRNRS--NQQLSPVIWPGETIVKPRGWAFPSGGKELKIG 269 IGYWSNYSGLS+ PETLY +P NRS NQ+L IWPG+T++ PRGWAF + GK+L+IG Sbjct: 403 IGYWSNYSGLSITPPETLYTKPPNRSSANQKLYNAIWPGDTLLTPRGWAFANNGKQLRIG 462 Query: 268 VPNRASFREFVTEVNGTDGVKGFCIDVFTAAVKLLPYGVPFKFEPYGDGHQNPNYNELVN 89 VP R SFREFV++V GTD KGFCIDVFTAAV LLPY V ++F P+GDG +NP+Y ELVN Sbjct: 463 VPIRVSFREFVSQVQGTDTFKGFCIDVFTAAVNLLPYPVQYQFVPFGDGKENPSYTELVN 522 Query: 88 LITNATFDAVVGDIAIVTNRTRIVDLTQP 2 IT FDA VGDIAIVT RT+++D TQP Sbjct: 523 KITTGFFDAAVGDIAIVTKRTKVIDFTQP 551 >emb|CAN72607.1| hypothetical protein VITISV_021339 [Vitis vinifera] Length = 916 Score = 296 bits (759), Expect = 2e-78 Identities = 142/207 (68%), Positives = 165/207 (79%), Gaps = 2/207 (0%) Frame = -2 Query: 616 GNLHLEAMSVFDGGKFLLNNILQSRLNGLTGPVEFNSDRSLIRPAYDVINILGTGFRGIG 437 G+ HLE M+VFDGG LLNNIL+S GLTGP +F SDRSL PA+D+IN++GTG+R IG Sbjct: 336 GSRHLEEMNVFDGGMLLLNNILKSNFVGLTGPFKFTSDRSLYAPAFDIINVIGTGYRQIG 395 Query: 436 YWSNYSGLSVITPETLYMRPRNRS--NQQLSPVIWPGETIVKPRGWAFPSGGKELKIGVP 263 YWSNYSGLS TPE LY +P NRS NQ+L V+WPGET+ KPRGW FP+ GK LKIGVP Sbjct: 396 YWSNYSGLSTETPEALYGKPPNRSSVNQRLYGVVWPGETLSKPRGWVFPNNGKLLKIGVP 455 Query: 262 NRASFREFVTEVNGTDGVKGFCIDVFTAAVKLLPYGVPFKFEPYGDGHQNPNYNELVNLI 83 NR S+REFV+ V GTD KGFCIDVFTAAV LLPY VPF++ GDGH+NPNY+ELV ++ Sbjct: 456 NRVSYREFVSRVRGTDMFKGFCIDVFTAAVTLLPYAVPFQYVSVGDGHKNPNYSELVRMV 515 Query: 82 TNATFDAVVGDIAIVTNRTRIVDLTQP 2 DAVVGDIAIVT+RTRIVD TQP Sbjct: 516 AEGELDAVVGDIAIVTSRTRIVDFTQP 542