BLASTX nr result

ID: Coptis21_contig00022406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022406
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530110.1| PREDICTED: transforming growth factor-beta r...    56   5e-06

>ref|XP_003530110.1| PREDICTED: transforming growth factor-beta receptor-associated
           protein 1-like [Glycine max]
          Length = 981

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
 Frame = +1

Query: 259 ISFTKSVPVTTRSIDSIHVXXXXXXXXXXXXSDGYIFLIDSHLLTPLHKFTYPKGVHLLS 438
           +SF +SV V+  +++SI V            SDG +FL+DS L     K ++PKGV L++
Sbjct: 81  LSFLRSVSVSDTAVESISVIEEFGKLLLL--SDGALFLVDSELSNGATKLSFPKGVSLVT 138

Query: 439 PR----FGLXXXXXXXXXXXXKTGRRFFEKWKRGEKVEY-LSSGNNCNSLVAVTIGKRIL 603
            R     G              +G   F+K +     E  + S      + AV +GKR++
Sbjct: 139 RRRFRNNGGGESEGFGSGLGSGSGLGLFQKLRMNSMKEVDVQSETGGGFVFAVVVGKRLI 198

Query: 604 LIEVVLTDVSGK--------GVIVVLKEI 666
           L E+VL + +GK        G +V+LKEI
Sbjct: 199 LAELVLGNRNGKTERDDGGGGTLVILKEI 227


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