BLASTX nr result

ID: Coptis21_contig00022397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022397
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71754.1| hypothetical protein VITISV_004107 [Vitis vinifera]    58   7e-07

>emb|CAN71754.1| hypothetical protein VITISV_004107 [Vitis vinifera]
          Length = 590

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
 Frame = -3

Query: 412 DNGADKAKSVMPIS--KPKSGNEKCKLALGSKSNVVADACIIEGFGPDDKIHNVKMGEGY 239
           D    K + V P    +P+    KC+LA G+K N+VA   II   GP+            
Sbjct: 285 DKPIRKVEDVTPPEAIEPQKKVRKCELAXGTKENIVAGGTIILECGPN------------ 332

Query: 238 VRVQIIRAILANSLLPRPIPDDDITTVGGAVGHHVAWPSDFVIFDNLAISKPMLGNNQAV 59
             V +     +++ LP PIP    TTVG A+G+ V WP+D VI     I  P+L + +A 
Sbjct: 333 YLVVVDAPYDSSAPLPIPIPGQT-TTVGAAIGYQVLWPTDLVI-----IRTPILASKKAK 386

Query: 58  RSKDNDNGAKA-GSKGND 8
           + K N+   K+ G K  D
Sbjct: 387 KQKVNEVEVKSKGEKPQD 404


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