BLASTX nr result

ID: Coptis21_contig00022389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022389
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152235.1| PREDICTED: cellulose synthase-like protein D...   139   7e-31
gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirs...   139   7e-31
ref|XP_002892121.1| hypothetical protein ARALYDRAFT_887416 [Arab...   139   7e-31
emb|CBI36913.3| unnamed protein product [Vitis vinifera]              139   7e-31
ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D...   139   7e-31

>ref|XP_004152235.1| PREDICTED: cellulose synthase-like protein D5-like [Cucumis
           sativus] gi|449531183|ref|XP_004172567.1| PREDICTED:
           cellulose synthase-like protein D5-like [Cucumis
           sativus]
          Length = 1169

 Score =  139 bits (351), Expect = 7e-31
 Identities = 64/67 (95%), Positives = 65/67 (97%)
 Frame = +2

Query: 692 PGYNHNKKAGAMNALVRTSAITSNGPFILNLDCDHYIYNSAALREGMCFMLDRGGDRICY 871
           PGY+HNKKAGAMNALVRTSAI SNGPFILNLDCDHYIYNS ALREGMCFMLDRGGDRICY
Sbjct: 619 PGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICY 678

Query: 872 VQFPQRF 892
           VQFPQRF
Sbjct: 679 VQFPQRF 685


>gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirsutum]
          Length = 1175

 Score =  139 bits (351), Expect = 7e-31
 Identities = 64/67 (95%), Positives = 65/67 (97%)
 Frame = +2

Query: 692 PGYNHNKKAGAMNALVRTSAITSNGPFILNLDCDHYIYNSAALREGMCFMLDRGGDRICY 871
           PGY+HNKKAGAMNALVRTSAI SNGPFILNLDCDHYIYNS ALREGMCFMLDRGGDRICY
Sbjct: 625 PGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICY 684

Query: 872 VQFPQRF 892
           VQFPQRF
Sbjct: 685 VQFPQRF 691


>ref|XP_002892121.1| hypothetical protein ARALYDRAFT_887416 [Arabidopsis lyrata subsp.
           lyrata] gi|297337963|gb|EFH68380.1| hypothetical protein
           ARALYDRAFT_887416 [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  139 bits (351), Expect = 7e-31
 Identities = 64/67 (95%), Positives = 65/67 (97%)
 Frame = +2

Query: 692 PGYNHNKKAGAMNALVRTSAITSNGPFILNLDCDHYIYNSAALREGMCFMLDRGGDRICY 871
           PGY+HNKKAGAMNALVRTSAI SNGPFILNLDCDHYIYNS ALREGMCFMLDRGGDRICY
Sbjct: 634 PGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSMALREGMCFMLDRGGDRICY 693

Query: 872 VQFPQRF 892
           VQFPQRF
Sbjct: 694 VQFPQRF 700


>emb|CBI36913.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score =  139 bits (351), Expect = 7e-31
 Identities = 64/67 (95%), Positives = 65/67 (97%)
 Frame = +2

Query: 692 PGYNHNKKAGAMNALVRTSAITSNGPFILNLDCDHYIYNSAALREGMCFMLDRGGDRICY 871
           PGY+HNKKAGAMNALVRTSAI SNGPFILNLDCDHYIYNS ALREGMCFMLDRGGDRICY
Sbjct: 420 PGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICY 479

Query: 872 VQFPQRF 892
           VQFPQRF
Sbjct: 480 VQFPQRF 486


>ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D5-like [Vitis vinifera]
          Length = 1171

 Score =  139 bits (351), Expect = 7e-31
 Identities = 64/67 (95%), Positives = 65/67 (97%)
 Frame = +2

Query: 692 PGYNHNKKAGAMNALVRTSAITSNGPFILNLDCDHYIYNSAALREGMCFMLDRGGDRICY 871
           PGY+HNKKAGAMNALVRTSAI SNGPFILNLDCDHYIYNS ALREGMCFMLDRGGDRICY
Sbjct: 624 PGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICY 683

Query: 872 VQFPQRF 892
           VQFPQRF
Sbjct: 684 VQFPQRF 690


Top