BLASTX nr result

ID: Coptis21_contig00022388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022388
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D...   147   4e-71
ref|XP_002523143.1| Cellulose synthase A catalytic subunit 3 [UD...   148   7e-69
ref|XP_003521583.1| PREDICTED: cellulose synthase-like protein D...   149   3e-68
ref|XP_002301494.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-67
gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirs...   143   8e-67

>ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D5-like [Vitis vinifera]
          Length = 1171

 Score =  147 bits (372), Expect(2) = 4e-71
 Identities = 73/104 (70%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
 Frame = -1

Query: 555 VQFPQRFEGIDPNDRYANHNTVFFYVSM*ALDGLQGPMYVGSP-ISEGIALYGFSPPRAT 379
           VQFPQRFEGIDPNDRYANHNTVFF VSM ALDGLQGPMYVG+  +   IALYGFSPPRAT
Sbjct: 684 VQFPQRFEGIDPNDRYANHNTVFFDVSMRALDGLQGPMYVGTGCVFRRIALYGFSPPRAT 743

Query: 378 EHHGWFGRSXXXXXXXXXXXXXXXLDEMAVPIIDDHNDDDAEIE 247
           EHHGWFGR                 +EM +PII DHNDDDA+IE
Sbjct: 744 EHHGWFGRRKIKLFLRKPKVTKKEEEEMVLPIIGDHNDDDADIE 787



 Score =  145 bits (367), Expect(2) = 4e-71
 Identities = 69/82 (84%), Positives = 76/82 (92%)
 Frame = -3

Query: 247  TLLLPRRFGNSTTLVVSIPVAEYQGRLLQEL*GKGSHGRPAASLAVPREPLDAATVAEAI 68
            +LLLP+RFGNS +L  SIPVAE+QGR LQ+L GKGSHGRPA SLAVPREPLDAATVAEAI
Sbjct: 788  SLLLPKRFGNSNSLAASIPVAEFQGRPLQDLQGKGSHGRPAGSLAVPREPLDAATVAEAI 847

Query: 67   TVISCFYEDKTEWGRRVGWIYG 2
            +VISCFYEDKTEWG+RVGWIYG
Sbjct: 848  SVISCFYEDKTEWGKRVGWIYG 869


>ref|XP_002523143.1| Cellulose synthase A catalytic subunit 3 [UDP-forming], putative
            [Ricinus communis] gi|223537705|gb|EEF39328.1| Cellulose
            synthase A catalytic subunit 3 [UDP-forming], putative
            [Ricinus communis]
          Length = 1162

 Score =  148 bits (373), Expect(2) = 7e-69
 Identities = 68/82 (82%), Positives = 78/82 (95%)
 Frame = -3

Query: 247  TLLLPRRFGNSTTLVVSIPVAEYQGRLLQEL*GKGSHGRPAASLAVPREPLDAATVAEAI 68
            +LLLP+RFGNST+L  SIP+AEYQGRLLQ++ G+G+HGRPA SLAVPREPLDAATVAEAI
Sbjct: 779  SLLLPKRFGNSTSLAASIPIAEYQGRLLQDVQGRGNHGRPAGSLAVPREPLDAATVAEAI 838

Query: 67   TVISCFYEDKTEWGRRVGWIYG 2
            +VISCFYEDKTEWG+RVGWIYG
Sbjct: 839  SVISCFYEDKTEWGKRVGWIYG 860



 Score =  138 bits (347), Expect(2) = 7e-69
 Identities = 70/104 (67%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
 Frame = -1

Query: 555 VQFPQRFEGIDPNDRYANHNTVFFYVSM*ALDGLQGPMYVGSP-ISEGIALYGFSPPRAT 379
           VQFPQRFEGIDP+DRYANHNTVFF VSM ALDGLQGPMYVG+  I    ALYGFSPPR T
Sbjct: 675 VQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRTT 734

Query: 378 EHHGWFGRSXXXXXXXXXXXXXXXLDEMAVPIIDDHNDDDAEIE 247
           EHHGWFGR                 DE+A+PI  D NDDDA+IE
Sbjct: 735 EHHGWFGRKKIKLFLRKPKTTKKQEDEIALPINCDQNDDDADIE 778


>ref|XP_003521583.1| PREDICTED: cellulose synthase-like protein D5-like [Glycine max]
          Length = 1151

 Score =  149 bits (375), Expect(2) = 3e-68
 Identities = 71/82 (86%), Positives = 77/82 (93%)
 Frame = -3

Query: 247  TLLLPRRFGNSTTLVVSIPVAEYQGRLLQEL*GKGSHGRPAASLAVPREPLDAATVAEAI 68
            +LLLPRRFGNST+L  SIPVAEYQGRLLQ+L GKG+ GRPA SLAVPREPLDAATVAEAI
Sbjct: 767  SLLLPRRFGNSTSLAASIPVAEYQGRLLQDLQGKGTQGRPAGSLAVPREPLDAATVAEAI 826

Query: 67   TVISCFYEDKTEWGRRVGWIYG 2
            +VISCFYEDKTEWG+RVGWIYG
Sbjct: 827  SVISCFYEDKTEWGKRVGWIYG 848



 Score =  135 bits (340), Expect(2) = 3e-68
 Identities = 69/104 (66%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
 Frame = -1

Query: 555 VQFPQRFEGIDPNDRYANHNTVFFYVSM*ALDGLQGPMYVGSP-ISEGIALYGFSPPRAT 379
           VQFPQRFEGIDP+DRYANHNTVFF VSM ALDGLQGPMYVG+  I    ALYGFSPPRAT
Sbjct: 663 VQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRAT 722

Query: 378 EHHGWFGRSXXXXXXXXXXXXXXXLDEMAVPIIDDHNDDDAEIE 247
           EHHGW GR                 DE+ VPI   +NDDDA+IE
Sbjct: 723 EHHGWLGRRKIKLFLRKPKVSKKEEDEICVPINGGYNDDDADIE 766


>ref|XP_002301494.1| predicted protein [Populus trichocarpa] gi|222843220|gb|EEE80767.1|
            predicted protein [Populus trichocarpa]
          Length = 1165

 Score =  148 bits (374), Expect(2) = 5e-67
 Identities = 71/81 (87%), Positives = 76/81 (93%)
 Frame = -3

Query: 244  LLLPRRFGNSTTLVVSIPVAEYQGRLLQEL*GKGSHGRPAASLAVPREPLDAATVAEAIT 65
            LLLP RFGNST+L  SIPVAEYQGRLLQ+L GKG+HGRPA SLAVPREPLDAATVAEAI+
Sbjct: 787  LLLPIRFGNSTSLAASIPVAEYQGRLLQDLQGKGNHGRPAGSLAVPREPLDAATVAEAIS 846

Query: 64   VISCFYEDKTEWGRRVGWIYG 2
            VISCFYEDKTEWG+RVGWIYG
Sbjct: 847  VISCFYEDKTEWGKRVGWIYG 867



 Score =  131 bits (330), Expect(2) = 5e-67
 Identities = 67/105 (63%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
 Frame = -1

Query: 555 VQFPQRFEGIDPNDRYANHNTVFFYVSM*ALDGLQGPMYVGSP-ISEGIALYGFSPPRAT 379
           VQFPQRF+GIDP+DRYANHNT+FF VSM ALDGLQGPMYVG+  I    ALYGFSPPR T
Sbjct: 680 VQFPQRFDGIDPSDRYANHNTIFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRTT 739

Query: 378 EHHGWFGRSXXXXXXXXXXXXXXXLDEMAVPIIDDHND-DDAEIE 247
           EHHGWFGR                 DE+A+PI  DH D DD +IE
Sbjct: 740 EHHGWFGRRKIKLFLRKPKAAKKQEDEIALPINGDHGDIDDVDIE 784


>gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirsutum]
          Length = 1175

 Score =  143 bits (360), Expect(2) = 8e-67
 Identities = 68/82 (82%), Positives = 76/82 (92%)
 Frame = -3

Query: 247  TLLLPRRFGNSTTLVVSIPVAEYQGRLLQEL*GKGSHGRPAASLAVPREPLDAATVAEAI 68
            +LLLP+RFGNST+LV SIPVAEYQGRLLQ++ G  + GRPA SLAVPREPLDAATVAEAI
Sbjct: 792  SLLLPKRFGNSTSLVASIPVAEYQGRLLQDMQGMRNQGRPAGSLAVPREPLDAATVAEAI 851

Query: 67   TVISCFYEDKTEWGRRVGWIYG 2
            +VISCFYEDKTEWG+RVGWIYG
Sbjct: 852  SVISCFYEDKTEWGKRVGWIYG 873



 Score =  136 bits (342), Expect(2) = 8e-67
 Identities = 68/100 (68%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
 Frame = -1

Query: 555 VQFPQRFEGIDPNDRYANHNTVFFYVSM*ALDGLQGPMYVGSP-ISEGIALYGFSPPRAT 379
           VQFPQRFEGIDPNDRYANHNTVFF VSM ALDGLQGPMYVG+  I    ALYGFSPPRAT
Sbjct: 685 VQFPQRFEGIDPNDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRAT 744

Query: 378 EHHGWFGRSXXXXXXXXXXXXXXXLDEMAVPIIDDHNDDD 259
           EHHGWFGR                 DE+ +PI  +HNDDD
Sbjct: 745 EHHGWFGRRKIKLLLRKPKVTKKAEDEIVLPINGEHNDDD 784


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