BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022372
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Gly...   429   e-118
ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Gly...   429   e-118
ref|XP_002305805.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116
ref|XP_002519048.1| DNA mismatch repair protein muts2, putative ...   417   e-114
ref|XP_003637393.1| MutS2 family protein [Medicago truncatula] g...   409   e-112

>ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Glycine max]
          Length = 914

 Score =  429 bits (1103), Expect = e-118
 Identities = 218/340 (64%), Positives = 272/340 (80%)
 Frame = +2

Query: 2    ADIGDHQSLEQNLSTFSGHISRICKILELSSKESLVLIDEIGCGTDPSEGVALSASILQY 181
            ADIGDHQSLEQNLSTFSGHISRICKILE++S +SLVLIDEIG GTDPSEGVALSASILQY
Sbjct: 475  ADIGDHQSLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQY 534

Query: 182  LKNRVNLAVVTTHFADLSCLNEKDTRFENAAMEFCLETLQPTYHILWGCSGDSNALTIAK 361
            LK+RVNLAVVTTH+ADLS + EKDTRF+NAAMEF LETLQPTY ILWGC+GDSNAL+IA+
Sbjct: 535  LKDRVNLAVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTYRILWGCTGDSNALSIAQ 594

Query: 362  SIGFDQKVLDRAHMWVGKLMPDKQLERKNMLYQSLLEERNTLETQARQSLSLHSEITKLY 541
            SIGFD+ ++DRA  WV K  P++Q ER+ MLYQSL EERN L+ QA ++ S+H+EI  +Y
Sbjct: 595  SIGFDRNIIDRAQKWVEKFKPEQQQERRGMLYQSLQEERNQLKAQAEKAASVHAEIMSVY 654

Query: 542  CEIQDEAEDLDRREAALKAMETQQVKQELKAAKAQIDGVVKNFENHVSSVSPDQFNILVK 721
             EIQ EAEDLD+RE  L A ETQQV+ EL+ AK+QI+ V++ FE  +     DQ N L++
Sbjct: 655  NEIQGEAEDLDQREMELMAKETQQVQHELEHAKSQIETVIQKFEKQLRISGRDQLNYLIR 714

Query: 722  KSEAVIASIVEAHRPTGNIFVREANNSSYIPKVGEKVRVKGLGDKLATIVEAPGDDGMAL 901
            +SE+ IASIV+AH P  +  + EA+ + Y P++GE+V VKGLG KLAT+VE+PGDDG  +
Sbjct: 715  ESESAIASIVKAHTPADSFPINEADRALYTPQIGEQVHVKGLGGKLATVVESPGDDGTIM 774

Query: 902  VQYGKVKVRVNRNKLNSIQDISRRTKRNAATSTLTGLEGL 1021
            VQYGKVKVRV ++ + +I   SR+    +++ST  G + L
Sbjct: 775  VQYGKVKVRVKKSNIIAIPS-SRKNAVTSSSSTHQGRQSL 813


>ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Glycine max]
          Length = 902

 Score =  429 bits (1102), Expect = e-118
 Identities = 217/339 (64%), Positives = 272/339 (80%)
 Frame = +2

Query: 2    ADIGDHQSLEQNLSTFSGHISRICKILELSSKESLVLIDEIGCGTDPSEGVALSASILQY 181
            ADIGDHQSLEQNLSTFSGHISRICKILE++S +SLVLIDEIG GTDPSEGVALSASILQY
Sbjct: 475  ADIGDHQSLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQY 534

Query: 182  LKNRVNLAVVTTHFADLSCLNEKDTRFENAAMEFCLETLQPTYHILWGCSGDSNALTIAK 361
            LK+RVNLAVVTTH+ADLS + EKDTRF+NAAMEF LETLQPTY ILWGC+GDSNAL+IA+
Sbjct: 535  LKDRVNLAVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTYRILWGCTGDSNALSIAQ 594

Query: 362  SIGFDQKVLDRAHMWVGKLMPDKQLERKNMLYQSLLEERNTLETQARQSLSLHSEITKLY 541
            SIGFD+ ++DRA  WV K  P++Q ER+ MLYQSL EERN L+ QA ++ S+H+EI  +Y
Sbjct: 595  SIGFDRNIIDRAQKWVEKFKPEQQQERRGMLYQSLQEERNQLKAQAEKAASVHAEIMSVY 654

Query: 542  CEIQDEAEDLDRREAALKAMETQQVKQELKAAKAQIDGVVKNFENHVSSVSPDQFNILVK 721
             EIQ EAEDLD+RE  L A ETQQV+ EL+ AK+QI+ V++ FE  +     DQ N L++
Sbjct: 655  NEIQGEAEDLDQREMELMAKETQQVQHELEHAKSQIETVIQKFEKQLRISGRDQLNYLIR 714

Query: 722  KSEAVIASIVEAHRPTGNIFVREANNSSYIPKVGEKVRVKGLGDKLATIVEAPGDDGMAL 901
            +SE+ IASIV+AH P  +  + EA+ + Y P++GE+V VKGLG KLAT+VE+PGDDG  +
Sbjct: 715  ESESAIASIVKAHTPADSFPINEADRALYTPQIGEQVHVKGLGGKLATVVESPGDDGTIM 774

Query: 902  VQYGKVKVRVNRNKLNSIQDISRRTKRNAATSTLTGLEG 1018
            VQYGKVKVRV ++ + +I      +++NA TS+ +  +G
Sbjct: 775  VQYGKVKVRVKKSNIIAIPS----SRKNAVTSSSSTHQG 809


>ref|XP_002305805.1| predicted protein [Populus trichocarpa] gi|222848769|gb|EEE86316.1|
            predicted protein [Populus trichocarpa]
          Length = 908

 Score =  423 bits (1088), Expect = e-116
 Identities = 220/338 (65%), Positives = 267/338 (78%)
 Frame = +2

Query: 2    ADIGDHQSLEQNLSTFSGHISRICKILELSSKESLVLIDEIGCGTDPSEGVALSASILQY 181
            ADIGDHQSLEQNLSTFSGHISRICKILE++S ESLVL+DEI  GTDPSEGVALS SIL Y
Sbjct: 475  ADIGDHQSLEQNLSTFSGHISRICKILEVASNESLVLVDEICSGTDPSEGVALSTSILHY 534

Query: 182  LKNRVNLAVVTTHFADLSCLNEKDTRFENAAMEFCLETLQPTYHILWGCSGDSNALTIAK 361
            L++ VNLAVVTTH+ADLS L +KD+RFENAAMEF LETLQPTY ILWGC+GDSNAL+IAK
Sbjct: 535  LRDHVNLAVVTTHYADLSLLKDKDSRFENAAMEFSLETLQPTYQILWGCTGDSNALSIAK 594

Query: 362  SIGFDQKVLDRAHMWVGKLMPDKQLERKNMLYQSLLEERNTLETQARQSLSLHSEITKLY 541
            SIGFD  +++RA  WV KL+P+KQ ER  MLYQSLLEERN LE QAR+  SLH+EI +LY
Sbjct: 595  SIGFDSNIIERARKWVEKLVPEKQQERSGMLYQSLLEERNRLEAQARKGASLHTEIMELY 654

Query: 542  CEIQDEAEDLDRREAALKAMETQQVKQELKAAKAQIDGVVKNFENHVSSVSPDQFNILVK 721
             EIQ E+EDLD R  AL A ETQ V+ ELKAA +QI+ VV+N E  +   SPDQFN L+K
Sbjct: 655  HEIQAESEDLDGRVKALMAKETQLVQLELKAANSQIETVVQNVETQLRKASPDQFNSLIK 714

Query: 722  KSEAVIASIVEAHRPTGNIFVREANNSSYIPKVGEKVRVKGLGDKLATIVEAPGDDGMAL 901
            KSE+ IASIVEAH  + ++   E + SSY P++GE+V VK LG+KLAT+VEAP DD   L
Sbjct: 715  KSESAIASIVEAHCSSDSLPASETDTSSYTPQLGEQVLVKRLGNKLATVVEAPRDDETVL 774

Query: 902  VQYGKVKVRVNRNKLNSIQDISRRTKRNAATSTLTGLE 1015
            VQYGK++VR+ ++ + +I    +  K++ AT  +  L+
Sbjct: 775  VQYGKIRVRMKKSDIRAI----KSDKKSKATILVPSLK 808


>ref|XP_002519048.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
            gi|223541711|gb|EEF43259.1| DNA mismatch repair protein
            muts2, putative [Ricinus communis]
          Length = 873

 Score =  417 bits (1073), Expect = e-114
 Identities = 218/338 (64%), Positives = 270/338 (79%)
 Frame = +2

Query: 2    ADIGDHQSLEQNLSTFSGHISRICKILELSSKESLVLIDEIGCGTDPSEGVALSASILQY 181
            ADIGD+QSLEQNLSTFSGHISRICKILE++SKESLVLIDEI  GTDPSEGVALS SILQY
Sbjct: 442  ADIGDNQSLEQNLSTFSGHISRICKILEVTSKESLVLIDEICSGTDPSEGVALSTSILQY 501

Query: 182  LKNRVNLAVVTTHFADLSCLNEKDTRFENAAMEFCLETLQPTYHILWGCSGDSNALTIAK 361
            L++RVNLAVVTTH+ADLS L + D++FENAAMEF LETLQPTY ILWG +G+SNAL+IAK
Sbjct: 502  LRDRVNLAVVTTHYADLSLLKDSDSQFENAAMEFSLETLQPTYQILWGSTGNSNALSIAK 561

Query: 362  SIGFDQKVLDRAHMWVGKLMPDKQLERKNMLYQSLLEERNTLETQARQSLSLHSEITKLY 541
            SIGFD  +++RA  WV KL+P+KQ  RK +LY+SL++ERN LE QAR++ S+H++I +LY
Sbjct: 562  SIGFDSNIIERAEKWVEKLIPEKQQHRKGLLYKSLMDERNKLEAQAREAASVHAQIMELY 621

Query: 542  CEIQDEAEDLDRREAALKAMETQQVKQELKAAKAQIDGVVKNFENHVSSVSPDQFNILVK 721
             EIQDEA +LD R  AL A ETQQV+QELKA K+QI+ VV NFEN +   SP QFN L++
Sbjct: 622  YEIQDEAGNLDSRIMALMAKETQQVQQELKATKSQIETVVHNFENLLRKASPLQFNSLIR 681

Query: 722  KSEAVIASIVEAHRPTGNIFVREANNSSYIPKVGEKVRVKGLGDKLATIVEAPGDDGMAL 901
            KSE+ IASIVEAH P  N+   E + SSY P++GE+V +KG G+K+AT+VEAPG D   L
Sbjct: 682  KSESAIASIVEAHYPADNLPASE-DVSSYTPQLGEQVHLKGFGNKVATVVEAPGKDETIL 740

Query: 902  VQYGKVKVRVNRNKLNSIQDISRRTKRNAATSTLTGLE 1015
            VQYGK++VRV ++ + +IQ      KR  AT  +  L+
Sbjct: 741  VQYGKIRVRVKKSDIRAIQG----KKRTEATKLVPRLK 774


>ref|XP_003637393.1| MutS2 family protein [Medicago truncatula]
            gi|355503328|gb|AES84531.1| MutS2 family protein
            [Medicago truncatula]
          Length = 913

 Score =  409 bits (1050), Expect = e-112
 Identities = 208/331 (62%), Positives = 260/331 (78%), Gaps = 1/331 (0%)
 Frame = +2

Query: 5    DIGDHQSLEQNLSTFSGHISRICKILELSSKESLVLIDEIGCGTDPSEGVALSASILQYL 184
            DIGDHQSLEQNLSTFSGHISRI K LE++SK+SLVLIDEIG GTDPSEGVALSASILQYL
Sbjct: 474  DIGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALSASILQYL 533

Query: 185  KNRVNLAVVTTHFADLSCLNEKDTRFENAAMEFCLETLQPTYHILWGCSGDSNALTIAKS 364
            +  VNLAVVTTH+ADLS + EKDT FENAAMEF LETLQPTY +LWGC+GDSNAL+IA+S
Sbjct: 534  REHVNLAVVTTHYADLSTMKEKDTCFENAAMEFSLETLQPTYRVLWGCTGDSNALSIAQS 593

Query: 365  IGFDQKVLDRAHMWVGKLMPDKQLERKNMLYQSLLEERNTLETQARQSLSLHSEITKLYC 544
            IGFD+ ++D A  WV KL P++Q ER+ MLYQSL EE+N L+ QA ++ S+H+EI  +Y 
Sbjct: 594  IGFDKNIIDHAQKWVEKLKPEQQQERRGMLYQSLQEEKNRLKAQAEKAASIHAEIMNVYS 653

Query: 545  EIQDEAEDLDRREAALKAMETQQVKQELKAAKAQIDGVVKNFENHVSSVSPDQFNILVKK 724
            EIQ EAEDLDRRE  L A E QQV+QEL+ AK+Q++ V++ FE  +  +  +Q N ++K+
Sbjct: 654  EIQGEAEDLDRRETMLMAKEAQQVQQELEDAKSQMEIVIQKFEKQLKDLGRNQLNSIIKE 713

Query: 725  SEAVIASIVEAHRPTGNIFVREAN-NSSYIPKVGEKVRVKGLGDKLATIVEAPGDDGMAL 901
            SE  IASIV+AH P     + +A+  +SY P+ GE+VRVKGLG KLAT+VE  GDD   L
Sbjct: 714  SETAIASIVKAHTPAVGFPINDADRTTSYTPQFGEQVRVKGLGGKLATVVELLGDDETIL 773

Query: 902  VQYGKVKVRVNRNKLNSIQDISRRTKRNAAT 994
            VQYGKVKVRV +N++ +I   ++    ++AT
Sbjct: 774  VQYGKVKVRVKKNRIRAIPPSAKNPVTSSAT 804