BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022355
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522838.1| pentatricopeptide repeat-containing protein,...    60   2e-07
ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_003541878.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
emb|CBI20513.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containi...    58   9e-07

>ref|XP_002522838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537922|gb|EEF39536.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 867

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/54 (55%), Positives = 38/54 (70%)
 Frame = +1

Query: 127 IMQVHAALAIIDQMCQLGLALSFSAVFPILHAIEESSEFDLVHPIYSVIRRHNL 288
           +++VHAAL I+DQMC+  L LS   +  IL A EES EF+LV  IYS+I  HNL
Sbjct: 440 LLKVHAALDIVDQMCKADLTLSIDVLNSILRACEESFEFNLVQQIYSLICHHNL 493


>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Vitis vinifera]
          Length = 848

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +1

Query: 133 QVHAALAIIDQMCQLGLALSFSAVFPILHAIEESSEFDLVHPIYSVIRRHNL 288
           +VHAAL I+DQMC+ GL LS      IL A EES EF+LVH IYSVI   +L
Sbjct: 413 KVHAALDIVDQMCEAGLTLSIEMFHSILRASEESFEFNLVHRIYSVICHQSL 464


>ref|XP_003541878.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21880,
           mitochondrial-like [Glycine max]
          Length = 705

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/54 (48%), Positives = 40/54 (74%)
 Frame = +1

Query: 127 IMQVHAALAIIDQMCQLGLALSFSAVFPILHAIEESSEFDLVHPIYSVIRRHNL 288
           +++VH AL I+D+MC+ GL LS  A+  IL   +++SE++LVH I+S IR +NL
Sbjct: 351 LLEVHVALDIVDEMCEAGLTLSTKALHSILQICDDTSEYNLVHRIFSTIRHYNL 404


>emb|CBI20513.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +1

Query: 133 QVHAALAIIDQMCQLGLALSFSAVFPILHAIEESSEFDLVHPIYSVIRRHNL 288
           +VHAAL I+DQMC+ GL LS      IL A EES EF+LVH IYSVI   +L
Sbjct: 183 KVHAALDIVDQMCEAGLTLSIEMFHSILRASEESFEFNLVHRIYSVICHQSL 234


>ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial [Glycine max]
          Length = 755

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/54 (46%), Positives = 39/54 (72%)
 Frame = +1

Query: 127 IMQVHAALAIIDQMCQLGLALSFSAVFPILHAIEESSEFDLVHPIYSVIRRHNL 288
           +++VH AL I+D+MC+ GL LS   +  IL   +++SE++LVH I+S I R+NL
Sbjct: 397 LLKVHVALDIVDEMCEAGLTLSTKVLHSILQICDDTSEYNLVHRIFSTIHRYNL 450