BLASTX nr result
ID: Coptis21_contig00022324
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00022324 (204 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249... 73 3e-11 ref|XP_004159619.1| PREDICTED: uncharacterized LOC101219150 [Cuc... 72 5e-11 ref|XP_004136797.1| PREDICTED: uncharacterized protein LOC101219... 70 2e-10 ref|XP_002311296.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 ref|XP_002520601.1| RNA binding protein, putative [Ricinus commu... 64 1e-08 >ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249627 [Vitis vinifera] gi|297738257|emb|CBI27458.3| unnamed protein product [Vitis vinifera] Length = 414 Score = 72.8 bits (177), Expect = 3e-11 Identities = 40/75 (53%), Positives = 45/75 (60%), Gaps = 8/75 (10%) Frame = +2 Query: 2 SIIGVFMAESKNAKD-------EVNVVEDPVIADDLPA-QEDAVDMNEXXXXXXXXXDVP 157 SIIGVF+AESKN D +VN V DP A DL +ED +DMN D Sbjct: 90 SIIGVFIAESKNKDDHSYNSGNQVNDVGDPGAASDLRGLEEDPLDMNGSAGRGRGRGDAA 149 Query: 158 GKAWQQDGDWMCPNT 202 GKAWQQDGDW+CPNT Sbjct: 150 GKAWQQDGDWLCPNT 164 >ref|XP_004159619.1| PREDICTED: uncharacterized LOC101219150 [Cucumis sativus] Length = 396 Score = 72.0 bits (175), Expect = 5e-11 Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 3/70 (4%) Frame = +2 Query: 2 SIIGVFMAESKNAKD-EVNVVEDPVIA--DDLPAQEDAVDMNEXXXXXXXXXDVPGKAWQ 172 SII V +AESK+ D NVV DP++A DD+ ++E AV MN D PGKAWQ Sbjct: 90 SIIEVHIAESKSKDDLSFNVVVDPIVAAGDDIGSEETAVGMNGGGGRGRGRGDAPGKAWQ 149 Query: 173 QDGDWMCPNT 202 Q+GDW+CPNT Sbjct: 150 QEGDWLCPNT 159 >ref|XP_004136797.1| PREDICTED: uncharacterized protein LOC101219150 [Cucumis sativus] Length = 399 Score = 70.1 bits (170), Expect = 2e-10 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 3/70 (4%) Frame = +2 Query: 2 SIIGVFMAESKNAKD-EVNVVEDPVIA--DDLPAQEDAVDMNEXXXXXXXXXDVPGKAWQ 172 +++ V +AESK+ D NVV DP++A DD+ ++E AV MN D PGKAWQ Sbjct: 93 NVVEVHIAESKSKDDLSFNVVVDPIVAAGDDIGSEETAVGMNGGGGRGRGRGDAPGKAWQ 152 Query: 173 QDGDWMCPNT 202 Q+GDW+CPNT Sbjct: 153 QEGDWLCPNT 162 >ref|XP_002311296.1| predicted protein [Populus trichocarpa] gi|222851116|gb|EEE88663.1| predicted protein [Populus trichocarpa] Length = 380 Score = 65.9 bits (159), Expect = 3e-09 Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Frame = +2 Query: 2 SIIGVFMAESKNAKDEV-NVVEDPVIADDLPAQEDAVDMNEXXXXXXXXXDVPGKAWQQD 178 +IIGVF+A+SK+ D V N V+DP D +E+A D+NE D GKAWQQD Sbjct: 90 NIIGVFIAQSKSKDDTVYNSVDDP--NDFGGFEENAKDLNEGGGRGRGQDDASGKAWQQD 147 Query: 179 GDWMCPNT 202 GDW+CPNT Sbjct: 148 GDWLCPNT 155 >ref|XP_002520601.1| RNA binding protein, putative [Ricinus communis] gi|223540200|gb|EEF41774.1| RNA binding protein, putative [Ricinus communis] Length = 483 Score = 63.9 bits (154), Expect = 1e-08 Identities = 36/70 (51%), Positives = 42/70 (60%), Gaps = 3/70 (4%) Frame = +2 Query: 2 SIIGVFMAESKNAKDE--VNVVEDPVIADDLPA-QEDAVDMNEXXXXXXXXXDVPGKAWQ 172 ++IGVFMAESKN KDE N DP D +E A DMN+ D GKAWQ Sbjct: 91 NLIGVFMAESKN-KDEHAYNSEVDPNAVGDFGGLEETAGDMNDDGGRGRGKGDASGKAWQ 149 Query: 173 QDGDWMCPNT 202 Q+GDW+CPNT Sbjct: 150 QEGDWLCPNT 159