BLASTX nr result

ID: Coptis21_contig00022324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022324
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249...    73   3e-11
ref|XP_004159619.1| PREDICTED: uncharacterized LOC101219150 [Cuc...    72   5e-11
ref|XP_004136797.1| PREDICTED: uncharacterized protein LOC101219...    70   2e-10
ref|XP_002311296.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002520601.1| RNA binding protein, putative [Ricinus commu...    64   1e-08

>ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249627 [Vitis vinifera]
           gi|297738257|emb|CBI27458.3| unnamed protein product
           [Vitis vinifera]
          Length = 414

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/75 (53%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
 Frame = +2

Query: 2   SIIGVFMAESKNAKD-------EVNVVEDPVIADDLPA-QEDAVDMNEXXXXXXXXXDVP 157
           SIIGVF+AESKN  D       +VN V DP  A DL   +ED +DMN          D  
Sbjct: 90  SIIGVFIAESKNKDDHSYNSGNQVNDVGDPGAASDLRGLEEDPLDMNGSAGRGRGRGDAA 149

Query: 158 GKAWQQDGDWMCPNT 202
           GKAWQQDGDW+CPNT
Sbjct: 150 GKAWQQDGDWLCPNT 164


>ref|XP_004159619.1| PREDICTED: uncharacterized LOC101219150 [Cucumis sativus]
          Length = 396

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = +2

Query: 2   SIIGVFMAESKNAKD-EVNVVEDPVIA--DDLPAQEDAVDMNEXXXXXXXXXDVPGKAWQ 172
           SII V +AESK+  D   NVV DP++A  DD+ ++E AV MN          D PGKAWQ
Sbjct: 90  SIIEVHIAESKSKDDLSFNVVVDPIVAAGDDIGSEETAVGMNGGGGRGRGRGDAPGKAWQ 149

Query: 173 QDGDWMCPNT 202
           Q+GDW+CPNT
Sbjct: 150 QEGDWLCPNT 159


>ref|XP_004136797.1| PREDICTED: uncharacterized protein LOC101219150 [Cucumis sativus]
          Length = 399

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = +2

Query: 2   SIIGVFMAESKNAKD-EVNVVEDPVIA--DDLPAQEDAVDMNEXXXXXXXXXDVPGKAWQ 172
           +++ V +AESK+  D   NVV DP++A  DD+ ++E AV MN          D PGKAWQ
Sbjct: 93  NVVEVHIAESKSKDDLSFNVVVDPIVAAGDDIGSEETAVGMNGGGGRGRGRGDAPGKAWQ 152

Query: 173 QDGDWMCPNT 202
           Q+GDW+CPNT
Sbjct: 153 QEGDWLCPNT 162


>ref|XP_002311296.1| predicted protein [Populus trichocarpa] gi|222851116|gb|EEE88663.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +2

Query: 2   SIIGVFMAESKNAKDEV-NVVEDPVIADDLPAQEDAVDMNEXXXXXXXXXDVPGKAWQQD 178
           +IIGVF+A+SK+  D V N V+DP   D    +E+A D+NE         D  GKAWQQD
Sbjct: 90  NIIGVFIAQSKSKDDTVYNSVDDP--NDFGGFEENAKDLNEGGGRGRGQDDASGKAWQQD 147

Query: 179 GDWMCPNT 202
           GDW+CPNT
Sbjct: 148 GDWLCPNT 155


>ref|XP_002520601.1| RNA binding protein, putative [Ricinus communis]
           gi|223540200|gb|EEF41774.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 483

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/70 (51%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = +2

Query: 2   SIIGVFMAESKNAKDE--VNVVEDPVIADDLPA-QEDAVDMNEXXXXXXXXXDVPGKAWQ 172
           ++IGVFMAESKN KDE   N   DP    D    +E A DMN+         D  GKAWQ
Sbjct: 91  NLIGVFMAESKN-KDEHAYNSEVDPNAVGDFGGLEETAGDMNDDGGRGRGKGDASGKAWQ 149

Query: 173 QDGDWMCPNT 202
           Q+GDW+CPNT
Sbjct: 150 QEGDWLCPNT 159


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