BLASTX nr result

ID: Coptis21_contig00022297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022297
         (1221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255...    77   9e-12
ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-08
emb|CAN66887.1| hypothetical protein VITISV_012135 [Vitis vinifera]    65   3e-08
ref|NP_001032066.1| uncharacterized protein [Arabidopsis thalian...    60   1e-06
dbj|BAB09784.1| unnamed protein product [Arabidopsis thaliana]         60   1e-06

>ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255280 [Vitis vinifera]
            gi|302143706|emb|CBI22567.3| unnamed protein product
            [Vitis vinifera]
          Length = 673

 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 76/244 (31%), Positives = 113/244 (46%), Gaps = 16/244 (6%)
 Frame = +1

Query: 538  SNNSVKRACSNQMFEENGSSSGEKYSQVSPLKRKRRLKLVSSDSE------DDDQIPIAK 699
            S NS+K+  S Q   E+ S        VS  KRK+R  +V+SDSE      DDD++P  K
Sbjct: 355  SENSLKKTISYQSDGEDLSGCKGNVPFVSTPKRKKRPNIVTSDSESDGGDDDDDKVPTRK 414

Query: 700  LQNRREEGLGVEHHSDSFGKQSFRDPTGSYQGENIDR-SLYPSSHPSISLRQCEVKRR-- 870
             +      L  +  S      S    + +  G +  R +L P     ++LR+CE K R  
Sbjct: 415  FKRLHLGELICDPTSSHLNSCS---TSATVSGVDCVRGALTPPKRRLMTLRECEKKGRAE 471

Query: 871  TDECVPLRPFETSGTAYNKSESITQNRKEKGVAV---SNGECKNLNEFCVNGPSEWEREG 1041
            T+    L   ET     N+SE +T    E        S+ E ++L  F +N       +G
Sbjct: 472  TNLASNLNARETE----NQSEILTNEDVEASETEEIGSDSEGESLGGFIINDSEVSGGDG 527

Query: 1042 --NSINPNKVGDV-YTLFNSRIKANRNWRN-WESAIDMDTSFEAEPKLCMRAICALYRQH 1209
              N       G+V +    SRI+ N + ++ WE   DM  +F  +P+LCM+A+CALYRQ 
Sbjct: 528  AYNESEEESNGNVDFVDIISRIRRNSDKKSKWEFEADMLAAFGKDPELCMKAVCALYRQQ 587

Query: 1210 KRQE 1221
              +E
Sbjct: 588  TSEE 591


>ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|222875058|gb|EEF12189.1|
            predicted protein [Populus trichocarpa]
          Length = 580

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 83/332 (25%), Positives = 136/332 (40%), Gaps = 53/332 (15%)
 Frame = +1

Query: 385  GGIKNTLIQLTGTSDEKRGSPKL-GIERPRFETVIEISDSDNDMET-------------- 519
            G ++ +L    G S  K+ +P   G  R     VI I DSD++ +T              
Sbjct: 176  GQVRKSLSFEEGKSPSKKIAPSTPGYVRRAAPNVINIGDSDDEFDTNGIQTFTSDGQGNG 235

Query: 520  ------------VPE---KSLSNNSVKRACSNQMFEENGSSSGEKYSQVSPLKRKRRLKL 654
                         P+   + +S  S+K A  NQ+ +E   +  +    VS  KRKR   +
Sbjct: 236  KVCISMDHPLERTPDSKNRKISEISLKGAVCNQIRKEYMDAVYDNVPHVSTPKRKRAANV 295

Query: 655  VSSDSEDD--DQIPIAKLQNRR-EEGLGVEHHSDSFGKQSFRDPTGSYQGENIDRSLYPS 825
            ++SD+E D  D +PI+KL+    +E +      DS   +S          +++   +  S
Sbjct: 296  IASDTESDVDDNVPISKLKRLHLQESIPHVVSMDSVPPKS----------DDVKGPVTRS 345

Query: 826  SHPSISLRQCEVKRRTDECVPLRPFETSGTAYNKSESITQ-NRKEKGVAVSNGECKNLNE 1002
                 +LR  E K +        P  TS T Y    +       E   A S+ E  +L+ 
Sbjct: 346  RRRLATLRNEEGKVKASNS----PSNTSKTNYRGIPTTDDVEDSESDDAGSDSEGGSLDG 401

Query: 1003 FCVN-----GPSEWEREGNSINPNKVGDVYTLFN-------------SRIKANRNWR-NW 1125
            F V+       ++     +   PN V D + L +             SR + +++ +  W
Sbjct: 402  FIVSDDTYASDADDTSSESEEKPNDVNDAFGLSDDGSDDDTDFGMILSRFQRSKDHKFKW 461

Query: 1126 ESAIDMDTSFEAEPKLCMRAICALYRQHKRQE 1221
            E   DM + F  +P+LCM+A+CALYRQ   +E
Sbjct: 462  EFEGDMLSDFGKDPELCMKAVCALYRQQSDEE 493


>emb|CAN66887.1| hypothetical protein VITISV_012135 [Vitis vinifera]
          Length = 628

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 7/235 (2%)
 Frame = +1

Query: 538  SNNSVKRACSNQMFEENGSSSGEKYSQVSPLKRKRRLKLVSSDSE------DDDQIPIAK 699
            S NS+K+  S Q   E+ S        VS  KRK+R  +V+SDSE      DDD++P  K
Sbjct: 360  SENSLKKTISYQSDGEDLSGCKGNVPFVSTPKRKKRPNIVTSDSESDGGDDDDDKVPTRK 419

Query: 700  LQNRREEGLGVEHHSDSFGKQSFRDPTGSYQGENIDR-SLYPSSHPSISLRQCEVKRRTD 876
             +      L  +  S      S    + +  G +  R +L P     ++LR+CE K R +
Sbjct: 420  FKRLHLGELICDPTSSHLNSCS---TSATVSGVDCVRGALTPPKRRLMTLRECEKKGRAE 476

Query: 877  ECVPLRPFETSGTAYNKSESITQNRKEKGVAVSNGECKNLNEFCVNGPSEWEREGNSINP 1056
                      +  A N +   T+N+ E    ++N + +          SE E  G   N 
Sbjct: 477  ----------TNLASNLNARETENQSE---ILTNEDVE---------ASETEEXGIRRNS 514

Query: 1057 NKVGDVYTLFNSRIKANRNWRNWESAIDMDTSFEAEPKLCMRAICALYRQHKRQE 1221
            +K                    WE   DM  +F  +P+LCM+A+CALYRQ   +E
Sbjct: 515  DKKS-----------------KWEFEADMLAAFGKDPELCMKAVCALYRQQTSEE 552


>ref|NP_001032066.1| uncharacterized protein [Arabidopsis thaliana]
            gi|79536815|ref|NP_200134.2| uncharacterized protein
            [Arabidopsis thaliana] gi|186531691|ref|NP_001119424.1|
            uncharacterized protein [Arabidopsis thaliana]
            gi|60547941|gb|AAX23934.1| hypothetical protein At5g53220
            [Arabidopsis thaliana] gi|332008941|gb|AED96324.1|
            uncharacterized protein [Arabidopsis thaliana]
            gi|332008942|gb|AED96325.1| uncharacterized protein
            [Arabidopsis thaliana] gi|332008943|gb|AED96326.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 368

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 16/263 (6%)
 Frame = +1

Query: 481  VIEISDSDNDMETVPEKSLS-NNSVKRACSNQMFEENGSSSGEKYSQVSPLKRKRRLKLV 657
            V+++ DS+ +  +  E+     ++++ A   + +E+    + +  +  SPL R++R +++
Sbjct: 43   VVDLCDSETEQRSEEEEFADVMDTIEEANIGENYEDEDVEACDANTS-SPLSRRKRKRVI 101

Query: 658  SSDSEDD------DQIPIAKLQNRREEGLGVEHHSDSFGKQSFRDPTGSYQGENIDRSLY 819
            +SD +DD      D IPI+ L+N +      +  SD F   +        +GE+  R L 
Sbjct: 102  ASDDDDDADDDDEDNIPISILKNLKPTN---QEMSDLFDTPN--------KGESESRRLS 150

Query: 820  PSSHPSISLRQCEVKRRTDECVPLRPFETSG--TAYNKSESITQNRKEKGVAVSNGECKN 993
                 S  L     K+R  E V        G  T  N  +  T+   E+G   S  E ++
Sbjct: 151  GQRRVSSRLN----KKRVSEEVSASTERLVGIPTTDNAEDDETE---EEG---SESEGES 200

Query: 994  LNEFCVNGPSEWERE-------GNSINPNKVGDVYTLFNSRIKANRNWRNWESAIDMDTS 1152
            L+ F ++     E         G   +  +VG    +   R +     R WE   DM   
Sbjct: 201  LDGFIIDDDDSQESVSEKSDEIGVEESDGEVGYADVMSRLRREKKPEKRKWEYEADMLAD 260

Query: 1153 FEAEPKLCMRAICALYRQHKRQE 1221
            F  +P+LCMRA+C L+R     E
Sbjct: 261  FGKDPELCMRAVCVLFRFQTEDE 283


>dbj|BAB09784.1| unnamed protein product [Arabidopsis thaliana]
          Length = 441

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 16/263 (6%)
 Frame = +1

Query: 481  VIEISDSDNDMETVPEKSLS-NNSVKRACSNQMFEENGSSSGEKYSQVSPLKRKRRLKLV 657
            V+++ DS+ +  +  E+     ++++ A   + +E+    + +  +  SPL R++R +++
Sbjct: 116  VVDLCDSETEQRSEEEEFADVMDTIEEANIGENYEDEDVEACDANTS-SPLSRRKRKRVI 174

Query: 658  SSDSEDD------DQIPIAKLQNRREEGLGVEHHSDSFGKQSFRDPTGSYQGENIDRSLY 819
            +SD +DD      D IPI+ L+N +      +  SD F   +        +GE+  R L 
Sbjct: 175  ASDDDDDADDDDEDNIPISILKNLKPTN---QEMSDLFDTPN--------KGESESRRLS 223

Query: 820  PSSHPSISLRQCEVKRRTDECVPLRPFETSG--TAYNKSESITQNRKEKGVAVSNGECKN 993
                 S  L     K+R  E V        G  T  N  +  T+   E+G   S  E ++
Sbjct: 224  GQRRVSSRLN----KKRVSEEVSASTERLVGIPTTDNAEDDETE---EEG---SESEGES 273

Query: 994  LNEFCVNGPSEWERE-------GNSINPNKVGDVYTLFNSRIKANRNWRNWESAIDMDTS 1152
            L+ F ++     E         G   +  +VG    +   R +     R WE   DM   
Sbjct: 274  LDGFIIDDDDSQESVSEKSDEIGVEESDGEVGYADVMSRLRREKKPEKRKWEYEADMLAD 333

Query: 1153 FEAEPKLCMRAICALYRQHKRQE 1221
            F  +P+LCMRA+C L+R     E
Sbjct: 334  FGKDPELCMRAVCVLFRFQTEDE 356


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