BLASTX nr result

ID: Coptis21_contig00022291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022291
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38895.3| unnamed protein product [Vitis vinifera]              362   6e-98
ref|XP_002274671.1| PREDICTED: uncharacterized protein LOC100243...   362   6e-98
ref|XP_002302529.1| predicted protein [Populus trichocarpa] gi|2...   346   6e-93
ref|XP_002456737.1| hypothetical protein SORBIDRAFT_03g041670 [S...   338   9e-91
ref|XP_002511685.1| oxidoreductase, putative [Ricinus communis] ...   338   1e-90

>emb|CBI38895.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  362 bits (930), Expect = 6e-98
 Identities = 170/217 (78%), Positives = 188/217 (86%)
 Frame = +3

Query: 3   MKRETFYQILLHCLPSGSRGGGEKQGKQLALPFRVLPWDSEXXXXXXXXXXXGLPKGVYF 182
           M+R+TFYQILLHCLPSGS+ GG KQG+QL LPFRVL WDSE           GLP G+YF
Sbjct: 321 MQRDTFYQILLHCLPSGSQNGG-KQGRQLGLPFRVLSWDSEVHAVLFVHKVAGLPSGLYF 379

Query: 183 LVRNEDHFHDLKRVTRSEFEWVKPEGCPADLPFYMLTRGDCQQIAKRLSCHQDIAADGCF 362
           LVRNEDHF DLK+VTRS F+W KPEGCP DLP Y LTRGD Q++AKR+SCHQDIA DGCF
Sbjct: 380 LVRNEDHFDDLKKVTRSNFKWAKPEGCPDDLPLYELTRGDFQELAKRISCHQDIAGDGCF 439

Query: 363 SLGMVARFERSLRDKSVWMYPRLFWETGILGQVLYLEAHAVGISATGIGCYFDDAVHEVL 542
           SLGMVA FE +L++KS WMYPRLFWETG+LGQVLYLEAHAVGISATGIGCYFDDAVHE+L
Sbjct: 440 SLGMVAHFEGTLQNKSAWMYPRLFWETGVLGQVLYLEAHAVGISATGIGCYFDDAVHELL 499

Query: 543 GLKGSEFQSLYHFTVGSPVVDKRIMSLPAYPGPAVDA 653
           GL+GS FQSLYHFTVG PV+DKRIMSLPAYPGPAVD+
Sbjct: 500 GLRGSSFQSLYHFTVGGPVLDKRIMSLPAYPGPAVDS 536


>ref|XP_002274671.1| PREDICTED: uncharacterized protein LOC100243840 [Vitis vinifera]
          Length = 586

 Score =  362 bits (930), Expect = 6e-98
 Identities = 170/217 (78%), Positives = 188/217 (86%)
 Frame = +3

Query: 3    MKRETFYQILLHCLPSGSRGGGEKQGKQLALPFRVLPWDSEXXXXXXXXXXXGLPKGVYF 182
            M+R+TFYQILLHCLPSGS+ GG KQG+QL LPFRVL WDSE           GLP G+YF
Sbjct: 371  MQRDTFYQILLHCLPSGSQNGG-KQGRQLGLPFRVLSWDSEVHAVLFVHKVAGLPSGLYF 429

Query: 183  LVRNEDHFHDLKRVTRSEFEWVKPEGCPADLPFYMLTRGDCQQIAKRLSCHQDIAADGCF 362
            LVRNEDHF DLK+VTRS F+W KPEGCP DLP Y LTRGD Q++AKR+SCHQDIA DGCF
Sbjct: 430  LVRNEDHFDDLKKVTRSNFKWAKPEGCPDDLPLYELTRGDFQELAKRISCHQDIAGDGCF 489

Query: 363  SLGMVARFERSLRDKSVWMYPRLFWETGILGQVLYLEAHAVGISATGIGCYFDDAVHEVL 542
            SLGMVA FE +L++KS WMYPRLFWETG+LGQVLYLEAHAVGISATGIGCYFDDAVHE+L
Sbjct: 490  SLGMVAHFEGTLQNKSAWMYPRLFWETGVLGQVLYLEAHAVGISATGIGCYFDDAVHELL 549

Query: 543  GLKGSEFQSLYHFTVGSPVVDKRIMSLPAYPGPAVDA 653
            GL+GS FQSLYHFTVG PV+DKRIMSLPAYPGPAVD+
Sbjct: 550  GLRGSSFQSLYHFTVGGPVLDKRIMSLPAYPGPAVDS 586


>ref|XP_002302529.1| predicted protein [Populus trichocarpa] gi|222844255|gb|EEE81802.1|
            predicted protein [Populus trichocarpa]
          Length = 598

 Score =  346 bits (887), Expect = 6e-93
 Identities = 160/217 (73%), Positives = 181/217 (83%)
 Frame = +3

Query: 3    MKRETFYQILLHCLPSGSRGGGEKQGKQLALPFRVLPWDSEXXXXXXXXXXXGLPKGVYF 182
            ++R+TFYQI+LHCLPSG  G GEKQ +QLALPFR L WD+E           GLPKG+YF
Sbjct: 383  IERDTFYQIMLHCLPSGC-GSGEKQKRQLALPFRALSWDAEVHAVLFVHRVVGLPKGLYF 441

Query: 183  LVRNEDHFHDLKRVTRSEFEWVKPEGCPADLPFYMLTRGDCQQIAKRLSCHQDIAADGCF 362
            LVRNEDH  +LK+ TR+EF+W KPEGCP DLP Y L R DCQQIAK+LSCHQDIA+DGCF
Sbjct: 442  LVRNEDHLDELKKSTRAEFKWEKPEGCPVDLPLYELARSDCQQIAKQLSCHQDIASDGCF 501

Query: 363  SLGMVARFERSLRDKSVWMYPRLFWETGILGQVLYLEAHAVGISATGIGCYFDDAVHEVL 542
            SLGMVA FE +L  K  WMYPRLFWETG+LGQVLYLEAHAVGISATGIGC+FDD VHE+L
Sbjct: 502  SLGMVAHFEPTLHSKGAWMYPRLFWETGVLGQVLYLEAHAVGISATGIGCFFDDPVHEIL 561

Query: 543  GLKGSEFQSLYHFTVGSPVVDKRIMSLPAYPGPAVDA 653
            GL+GS FQSLYHFTVG PV+DKRIM+LPAYPGP+ DA
Sbjct: 562  GLRGSNFQSLYHFTVGGPVLDKRIMNLPAYPGPSTDA 598


>ref|XP_002456737.1| hypothetical protein SORBIDRAFT_03g041670 [Sorghum bicolor]
            gi|241928712|gb|EES01857.1| hypothetical protein
            SORBIDRAFT_03g041670 [Sorghum bicolor]
          Length = 585

 Score =  338 bits (868), Expect = 9e-91
 Identities = 156/217 (71%), Positives = 178/217 (82%)
 Frame = +3

Query: 3    MKRETFYQILLHCLPSGSRGGGEKQGKQLALPFRVLPWDSEXXXXXXXXXXXGLPKGVYF 182
            M R+TFYQ+L+HCLPSG  G GE+QG+Q ALPFRVLPW++E           GLPKG+YF
Sbjct: 369  MGRDTFYQMLMHCLPSGEVGSGERQGQQSALPFRVLPWEAEVHAALFVHHISGLPKGMYF 428

Query: 183  LVRNEDHFHDLKRVTRSEFEWVKPEGCPADLPFYMLTRGDCQQIAKRLSCHQDIAADGCF 362
            LVRNE+HF  L+   R +FEWVKPEGCP  LP Y L +GDCQ+ A ++SC Q+IA+ GCF
Sbjct: 429  LVRNEEHFDALQHAMRQDFEWVKPEGCPDGLPLYRLMKGDCQKFAMQVSCFQEIASHGCF 488

Query: 363  SLGMVARFERSLRDKSVWMYPRLFWETGILGQVLYLEAHAVGISATGIGCYFDDAVHEVL 542
            SLGM+ARFE  L +K  WMYPRLFWETGILGQVLYLEAHAVGISATGIGCYFDDAVHE L
Sbjct: 489  SLGMIARFEPVLHEKGEWMYPRLFWETGILGQVLYLEAHAVGISATGIGCYFDDAVHEAL 548

Query: 543  GLKGSEFQSLYHFTVGSPVVDKRIMSLPAYPGPAVDA 653
            GLKG EFQSLYHFTVG+PV+DKRIMSLPAYPGP +DA
Sbjct: 549  GLKGLEFQSLYHFTVGAPVLDKRIMSLPAYPGPGIDA 585


>ref|XP_002511685.1| oxidoreductase, putative [Ricinus communis]
            gi|223548865|gb|EEF50354.1| oxidoreductase, putative
            [Ricinus communis]
          Length = 639

 Score =  338 bits (867), Expect = 1e-90
 Identities = 157/215 (73%), Positives = 179/215 (83%)
 Frame = +3

Query: 9    RETFYQILLHCLPSGSRGGGEKQGKQLALPFRVLPWDSEXXXXXXXXXXXGLPKGVYFLV 188
            R+TFYQILLHC+PSGS G GE+Q + LALPFR L WD+E            L KG+YFLV
Sbjct: 426  RDTFYQILLHCVPSGS-GSGERQKRLLALPFRALSWDAEVHAALFVHRVTRLSKGLYFLV 484

Query: 189  RNEDHFHDLKRVTRSEFEWVKPEGCPADLPFYMLTRGDCQQIAKRLSCHQDIAADGCFSL 368
            RNEDH +DLK+ TR+ F W KPEGCP DLP Y L  GDCQQI+K+LSCHQDIA+DGCFSL
Sbjct: 485  RNEDHLNDLKKATRAGFTWEKPEGCPDDLPLYELAGGDCQQISKQLSCHQDIASDGCFSL 544

Query: 369  GMVARFERSLRDKSVWMYPRLFWETGILGQVLYLEAHAVGISATGIGCYFDDAVHEVLGL 548
            GMVA FE +LR+K VWMYPRLFWETG+LGQVLYLEAHA+GISATGIGC+FDD VHE+LGL
Sbjct: 545  GMVAHFEPTLRNKGVWMYPRLFWETGVLGQVLYLEAHAIGISATGIGCFFDDPVHEILGL 604

Query: 549  KGSEFQSLYHFTVGSPVVDKRIMSLPAYPGPAVDA 653
            +GS +QSLYHFTVG PV+DKRIMSLPAYPGP +DA
Sbjct: 605  RGSNYQSLYHFTVGGPVLDKRIMSLPAYPGPGIDA 639


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