BLASTX nr result
ID: Coptis21_contig00022284
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00022284 (182 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi... 103 1e-20 ref|XP_002303045.1| predicted protein [Populus trichocarpa] gi|2... 100 1e-19 ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|2... 100 1e-19 ref|XP_002863920.1| pentatricopeptide repeat-containing protein ... 97 1e-18 ref|XP_002529915.1| pentatricopeptide repeat-containing protein,... 96 3e-18 >ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730, chloroplastic-like [Vitis vinifera] gi|297744374|emb|CBI37344.3| unnamed protein product [Vitis vinifera] Length = 497 Score = 103 bits (257), Expect = 1e-20 Identities = 50/60 (83%), Positives = 55/60 (91%) Frame = -2 Query: 181 AFGRAGDLKQMEYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVSRFIENSDVTL 2 AFGRAGDLKQMEYLFRLMR+E+IKP+C+TL SLV+AYGRAG AEKIG V RFIENSDV L Sbjct: 359 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVML 418 >ref|XP_002303045.1| predicted protein [Populus trichocarpa] gi|222844771|gb|EEE82318.1| predicted protein [Populus trichocarpa] Length = 388 Score = 100 bits (249), Expect = 1e-19 Identities = 49/60 (81%), Positives = 54/60 (90%) Frame = -2 Query: 181 AFGRAGDLKQMEYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVSRFIENSDVTL 2 AFGRAGDLKQMEYLFRLMR+E+IKP+C+TL SLV+AY AG EKIGSV RFIENSDVTL Sbjct: 251 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTL 310 >ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|222844770|gb|EEE82317.1| predicted protein [Populus trichocarpa] Length = 485 Score = 100 bits (249), Expect = 1e-19 Identities = 49/60 (81%), Positives = 54/60 (90%) Frame = -2 Query: 181 AFGRAGDLKQMEYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVSRFIENSDVTL 2 AFGRAGDLKQMEYLFRLMR+E+IKP+C+TL SLV+AY AG EKIGSV RFIENSDVTL Sbjct: 348 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTL 407 >ref|XP_002863920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297309755|gb|EFH40179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 498 Score = 97.4 bits (241), Expect = 1e-18 Identities = 46/60 (76%), Positives = 54/60 (90%) Frame = -2 Query: 181 AFGRAGDLKQMEYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVSRFIENSDVTL 2 AFGRAGDLKQMEYLFRLM++E+I P+C+TL SLV+AYGRAG A+KIG V RFIENSD+ L Sbjct: 361 AFGRAGDLKQMEYLFRLMQSERIIPSCVTLCSLVRAYGRAGKADKIGGVLRFIENSDIRL 420 >ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223530592|gb|EEF32469.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 636 Score = 95.9 bits (237), Expect = 3e-18 Identities = 46/60 (76%), Positives = 53/60 (88%) Frame = -2 Query: 181 AFGRAGDLKQMEYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVSRFIENSDVTL 2 AFGRAGDLKQMEYLFRLMR+E+IKP+C+TL SLV+AYG+A EKI V RFIENSD+TL Sbjct: 376 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITL 435