BLASTX nr result

ID: Coptis21_contig00022272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022272
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303430.1| predicted protein [Populus trichocarpa] gi|1...   272   9e-71
emb|CAN75134.1| hypothetical protein VITISV_018886 [Vitis vinifera]   259   8e-67
ref|XP_002278687.1| PREDICTED: uncharacterized protein LOC100252...   258   1e-66
ref|XP_003527241.1| PREDICTED: phosphatidylinositol-glycan biosy...   236   9e-60
ref|XP_003628749.1| Phosphatidylinositol-glycan biosynthesis cla...   232   1e-58

>ref|XP_002303430.1| predicted protein [Populus trichocarpa] gi|118488795|gb|ABK96208.1|
           unknown [Populus trichocarpa]
           gi|222840862|gb|EEE78409.1| predicted protein [Populus
           trichocarpa]
          Length = 315

 Score =  272 bits (696), Expect = 9e-71
 Identities = 139/270 (51%), Positives = 180/270 (66%)
 Frame = -1

Query: 972 DSSSDSETIVSLPCSQRYLSESYFEKHDSLTDLDFQGHLAHELPLCGCNQFQHNLNYVPR 793
           +SSS+S    S    ++Y+ ESYFEK+DSL + +FQ  +  EL    C     NLN++ R
Sbjct: 41  ESSSNSNN--SYCGFRKYIMESYFEKYDSLLEPNFQNFIVDELLFNTCKLLPDNLNHLLR 98

Query: 792 LSDPQRDLVGEGSHRHLSSTIKLRIQRKGTLELPAHFCHAVVIERLPSGVFADPFELQHL 613
           +S P R L+GEGSHRH+SSTI+  +Q     +L AHFC  ++IERLP+GVFADPFELQHL
Sbjct: 99  VSVPWRHLIGEGSHRHISSTIRFHMQPDSMSQLRAHFCKVIIIERLPTGVFADPFELQHL 158

Query: 612 VQRGVFTDVAVFGDTNLELPSALSNRSVVEIHVEIGQNFLSVNAKELEVKVDLPLHARYP 433
           ++RGVFTDVAVFGDTNLELPS LSN+S VEIH+++    L  +  ELE+  DLPLHARYP
Sbjct: 159 LKRGVFTDVAVFGDTNLELPSVLSNQSAVEIHMKVAPTSLLGHISELEISADLPLHARYP 218

Query: 432 PLDSSGYSRVEMGMPDVLMRCSFKEKSEYNDCVWTMPPERTYSNTSALVWRIPSGNEAHS 253
           PLD SGYS VE G P++ +RCS +E  ++  C+     +RT S T  +VWRIPSG  AH+
Sbjct: 219 PLDDSGYSEVEFGEPEIFLRCSMEENGDHESCLLMPTNDRTGSRTDNVVWRIPSGIRAHA 278

Query: 252 GXXXXXXXXXXXXXXXTIVLTAIYSPNWKL 163
           G                IVLT+I+  + KL
Sbjct: 279 GIVSAVTFLAASISTLLIVLTSIFYSDSKL 308


>emb|CAN75134.1| hypothetical protein VITISV_018886 [Vitis vinifera]
          Length = 334

 Score =  259 bits (662), Expect = 8e-67
 Identities = 127/267 (47%), Positives = 174/267 (65%)
 Frame = -1

Query: 963 SDSETIVSLPCSQRYLSESYFEKHDSLTDLDFQGHLAHELPLCGCNQFQHNLNYVPRLSD 784
           S ++++   P  ++++++SYF+K+DSL D DF   ++HEL    C     NLN V RLS 
Sbjct: 61  STNQSLNIPPYFEKHITKSYFDKYDSLLDSDFLDFISHELFPGSCELLLDNLNLVLRLSV 120

Query: 783 PQRDLVGEGSHRHLSSTIKLRIQRKGTLELPAHFCHAVVIERLPSGVFADPFELQHLVQR 604
            QR L+G+GSHRHLSS+ +  IQ +   ELP HFC A++IE+LP G+F DPFELQHL+QR
Sbjct: 121 QQRSLIGDGSHRHLSSSFRFNIQSELIAELPIHFCEAIIIEKLPYGIFXDPFELQHLLQR 180

Query: 603 GVFTDVAVFGDTNLELPSALSNRSVVEIHVEIGQNFLSVNAKELEVKVDLPLHARYPPLD 424
           GVF D AVFGDTNLELPS  SNRS+VE+H+++  N  S +   LE+ +DLPLH RYPPL+
Sbjct: 181 GVFMDAAVFGDTNLELPSVHSNRSLVEVHMDVDLNTFSRHKDGLEINIDLPLHIRYPPLE 240

Query: 423 SSGYSRVEMGMPDVLMRCSFKEKSEYNDCVWTMPPERTYSNTSALVWRIPSGNEAHSGXX 244
            SGYS +E+G PD+ MRCS + KS    C+  +           +VWR+PSG +AH+   
Sbjct: 241 ESGYSNIELGAPDLFMRCSIEAKSHNQSCLLMLKDNGVALGNGPVVWRVPSGIKAHARAV 300

Query: 243 XXXXXXXXXXXXXTIVLTAIYSPNWKL 163
                        +IVLT++Y  + KL
Sbjct: 301 SIVTFISAILSTLSIVLTSVYYSSTKL 327


>ref|XP_002278687.1| PREDICTED: uncharacterized protein LOC100252266 [Vitis vinifera]
           gi|297742059|emb|CBI33846.3| unnamed protein product
           [Vitis vinifera]
          Length = 329

 Score =  258 bits (660), Expect = 1e-66
 Identities = 127/267 (47%), Positives = 174/267 (65%)
 Frame = -1

Query: 963 SDSETIVSLPCSQRYLSESYFEKHDSLTDLDFQGHLAHELPLCGCNQFQHNLNYVPRLSD 784
           S ++++   P  ++++++SYF+K+DSL D DF   ++HEL    C     NLN V RLS 
Sbjct: 56  STNQSLNIPPYFEKHITKSYFDKYDSLLDSDFLDFISHELFPGSCELLLDNLNLVLRLSV 115

Query: 783 PQRDLVGEGSHRHLSSTIKLRIQRKGTLELPAHFCHAVVIERLPSGVFADPFELQHLVQR 604
            QR L+G+GSHRHLSS+ +  IQ +   ELP HFC A++IE+LP G+FADPFELQHL+QR
Sbjct: 116 QQRSLIGDGSHRHLSSSFRFNIQSELIAELPIHFCEAIIIEKLPYGIFADPFELQHLLQR 175

Query: 603 GVFTDVAVFGDTNLELPSALSNRSVVEIHVEIGQNFLSVNAKELEVKVDLPLHARYPPLD 424
           GVF   AVFGDTNLELPS  SNRS+VE+H+++  N  S +   LE+ +DLPLH RYPPL+
Sbjct: 176 GVFMGAAVFGDTNLELPSVHSNRSLVEVHMDVDLNTFSRHKDGLEINIDLPLHIRYPPLE 235

Query: 423 SSGYSRVEMGMPDVLMRCSFKEKSEYNDCVWTMPPERTYSNTSALVWRIPSGNEAHSGXX 244
            SGYS +E+G PD+ MRCS + KS    C+  +           +VWR+PSG +AH+   
Sbjct: 236 ESGYSNIELGAPDLFMRCSIEAKSHNQSCLLMLKDNGVALGNGPVVWRVPSGIKAHARAV 295

Query: 243 XXXXXXXXXXXXXTIVLTAIYSPNWKL 163
                        +IVLT++Y  + KL
Sbjct: 296 SIVTFISAILSTLSIVLTSVYYSSTKL 322


>ref|XP_003527241.1| PREDICTED: phosphatidylinositol-glycan biosynthesis class X
           protein-like [Glycine max]
          Length = 292

 Score =  236 bits (601), Expect = 9e-60
 Identities = 126/274 (45%), Positives = 176/274 (64%), Gaps = 1/274 (0%)
 Frame = -1

Query: 993 PMKSVARDSSSDSETIVSLPCSQRYLSESYFEKHDSLTDLDFQGHLAHELPLCGCNQFQH 814
           P  S   DS S            ++L +SY++++ +L DLDF+  ++ E+P   C+    
Sbjct: 23  PTSSSLADSISSPVHAKPFSPVNKFLMQSYYDRYINLHDLDFEKFMSQEVPYGSCD---- 78

Query: 813 NLNYVPRLSDPQRDLVGEGSHRHLSSTIKLRIQ-RKGTLELPAHFCHAVVIERLPSGVFA 637
           NLN+V RLSD +R L+GEGSHR +S+ I+L+ Q  K   EL ++ C  ++IERLPSGVFA
Sbjct: 79  NLNFVLRLSDLKRTLIGEGSHRTVSTLIQLKTQPSKSFSELLSNSCKFMIIERLPSGVFA 138

Query: 636 DPFELQHLVQRGVFTDVAVFGDTNLELPSALSNRSVVEIHVEIGQNFLSVNAKELEVKVD 457
           DPFELQHLVQRG F+D+AVFGDTNLELPS LSNRS VEIH+ +  N L    +  ++ ++
Sbjct: 139 DPFELQHLVQRGKFSDIAVFGDTNLELPSFLSNRSAVEIHLLVDPNILQ---EPTDINME 195

Query: 456 LPLHARYPPLDSSGYSRVEMGMPDVLMRCSFKEKSEYNDCVWTMPPERTYSNTSALVWRI 277
           LPLHARY PL+ SGYS +E G PD+++RCS KEK E ++C + +  +      + +VWRI
Sbjct: 196 LPLHARYQPLNGSGYSAIEFGAPDMVVRCSTKEKMENHNCFFKLEKDDANLYGAHIVWRI 255

Query: 276 PSGNEAHSGXXXXXXXXXXXXXXXTIVLTAIYSP 175
           PSG +AH+G                IV+ ++Y P
Sbjct: 256 PSGIKAHAGLVSAVTFIAALLSTIAIVVASLYQP 289


>ref|XP_003628749.1| Phosphatidylinositol-glycan biosynthesis class X protein [Medicago
           truncatula] gi|355522771|gb|AET03225.1|
           Phosphatidylinositol-glycan biosynthesis class X protein
           [Medicago truncatula]
          Length = 368

 Score =  232 bits (592), Expect = 1e-58
 Identities = 125/257 (48%), Positives = 168/257 (65%), Gaps = 1/257 (0%)
 Frame = -1

Query: 930 SQRYLSESYFEKHDSLTDLDFQGHLAHELPLCGCNQFQHNLNYVPRLSDPQRDLVGEGSH 751
           +++YL +SY++++ SL D DF+  ++ E+    C     N N + RLS  +RDLVGEGSH
Sbjct: 108 TKQYLMQSYYDRYTSLHDSDFENFMSQEVTSGLCEALPENHNSMLRLSVVRRDLVGEGSH 167

Query: 750 RHLSSTIKLRIQR-KGTLELPAHFCHAVVIERLPSGVFADPFELQHLVQRGVFTDVAVFG 574
           R +S+ IKL+ Q+ K   EL ++ C  +VIERLPSGVFADPFELQHL QRGV  ++AVFG
Sbjct: 168 RRMSTLIKLQSQQLKSLSELLSYSCEFIVIERLPSGVFADPFELQHLAQRGVCNNIAVFG 227

Query: 573 DTNLELPSALSNRSVVEIHVEIGQNFLSVNAKELEVKVDLPLHARYPPLDSSGYSRVEMG 394
           DTNLELPS LSNRS VEIH+++  N L    K  +  ++ PLHARY PL+ SGYS VE G
Sbjct: 228 DTNLELPSFLSNRSAVEIHLDVDPNTL---LKSTDFSIEFPLHARYQPLNESGYSIVEFG 284

Query: 393 MPDVLMRCSFKEKSEYNDCVWTMPPERTYSNTSALVWRIPSGNEAHSGXXXXXXXXXXXX 214
            PD+L+RCS KEK E N+C++ +  +      + LVWRIPSG +AHS             
Sbjct: 285 APDMLLRCSRKEKVENNNCLFRLKIDDANLYDAGLVWRIPSGRKAHSELVSAVTFLIALL 344

Query: 213 XXXTIVLTAIYSPNWKL 163
               IV+T++   N +L
Sbjct: 345 STLVIVVTSLRYFNCRL 361


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