BLASTX nr result

ID: Coptis21_contig00022269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022269
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275653.1| PREDICTED: LRR repeats and ubiquitin-like do...   235   4e-60
emb|CAN65127.1| hypothetical protein VITISV_005830 [Vitis vinifera]   234   1e-59
ref|XP_004166686.1| PREDICTED: LRR repeats and ubiquitin-like do...   233   2e-59
ref|XP_004143220.1| PREDICTED: uncharacterized protein LOC101207...   233   2e-59
ref|XP_002526616.1| leucine-rich repeat containing protein, puta...   228   7e-58

>ref|XP_002275653.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
           At2g30105 [Vitis vinifera] gi|297745853|emb|CBI15909.3|
           unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  235 bits (600), Expect = 4e-60
 Identities = 124/198 (62%), Positives = 153/198 (77%)
 Frame = -1

Query: 594 TSEMMTVHVKFSGRSIPISLSLNSTIKDLKTLLQPLTNVLPRGQKLIFKGKFLMDTMVLS 415
           T+  +T+++KFSGRSIP+S+S NST+KDLK+LLQPLTNVL RGQKLIFKG+ L D M L 
Sbjct: 15  TATTITLNIKFSGRSIPVSVSPNSTVKDLKSLLQPLTNVLTRGQKLIFKGRVLADGMTLR 74

Query: 414 GSDIRNGAKLMLMASQGLHQGDGFITKEKSTPSNLRKPALVDGDRAVQDKVVVNVDKTRT 235
            S+I +GAK+MLMASQGLHQG G I KE  T   LR+ A  +     + +V   +DK   
Sbjct: 75  ESEITDGAKVMLMASQGLHQGGGPILKEAPTRPILREAAHANPKGNKRSEVF--IDKGHL 132

Query: 234 ERWKLTGVIALSDSQLKVIPDEVWACGSSVRLLDISKNSIQEVHTKIGSLSSLQKLLLNA 55
           +RWKLTGVIALS+ QLKVIPDEVW CG S R+LD++ N IQ+V  KIG LSS+QKLLL+A
Sbjct: 133 DRWKLTGVIALSECQLKVIPDEVWVCGPSARVLDLNNNFIQDVPVKIGCLSSMQKLLLSA 192

Query: 54  NDIADESLSWQGVTALKS 1
           NDI DES+SW+GV +LKS
Sbjct: 193 NDILDESISWEGVVSLKS 210


>emb|CAN65127.1| hypothetical protein VITISV_005830 [Vitis vinifera]
          Length = 380

 Score =  234 bits (596), Expect = 1e-59
 Identities = 123/198 (62%), Positives = 152/198 (76%)
 Frame = -1

Query: 594 TSEMMTVHVKFSGRSIPISLSLNSTIKDLKTLLQPLTNVLPRGQKLIFKGKFLMDTMVLS 415
           T+  +T+++KFSGRSIP+S+S NST+KDLK+LLQPLTNVL RGQKLIFKG+ L D M L 
Sbjct: 15  TATTITLNIKFSGRSIPVSVSPNSTVKDLKSLLQPLTNVLTRGQKLIFKGRVLADGMTLR 74

Query: 414 GSDIRNGAKLMLMASQGLHQGDGFITKEKSTPSNLRKPALVDGDRAVQDKVVVNVDKTRT 235
            S+I +GAK+MLMASQGLHQG G I KE  T   LR+ A  +     + +V   +DK   
Sbjct: 75  ESEITDGAKVMLMASQGLHQGGGPILKEAPTRPILREXAHANPKGNKRSEVF--IDKGHL 132

Query: 234 ERWKLTGVIALSDSQLKVIPDEVWACGSSVRLLDISKNSIQEVHTKIGSLSSLQKLLLNA 55
           +RWKLTGVIALS+ QLK IPDEVW CG S R+LD++ N IQ+V  KIG LSS+QKLLL+A
Sbjct: 133 DRWKLTGVIALSECQLKAIPDEVWVCGPSARVLDLNNNFIQDVPVKIGCLSSMQKLLLSA 192

Query: 54  NDIADESLSWQGVTALKS 1
           NDI DES+SW+GV +LKS
Sbjct: 193 NDILDESISWEGVVSLKS 210


>ref|XP_004166686.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
           At2g30105-like [Cucumis sativus]
          Length = 367

 Score =  233 bits (595), Expect = 2e-59
 Identities = 119/193 (61%), Positives = 152/193 (78%)
 Frame = -1

Query: 582 MTVHVKFSGRSIPISLSLNSTIKDLKTLLQPLTNVLPRGQKLIFKGKFLMDTMVLSGSDI 403
           ++++VKF+G+SIPI+L  +ST+KDLK+LLQPLTNVLPRGQKLIFKGK L D M L+ S++
Sbjct: 6   ISINVKFTGKSIPITLPPDSTVKDLKSLLQPLTNVLPRGQKLIFKGKVLADEMTLAASEV 65

Query: 402 RNGAKLMLMASQGLHQGDGFITKEKSTPSNLRKPALVDGDRAVQDKVVVNVDKTRTERWK 223
            NGAK+MLMASQGLHQGDG I +E  T    R+ ++ +  + V +K  V VDK+R ERWK
Sbjct: 66  ANGAKMMLMASQGLHQGDGPILREART--RPRERSVQNASKLVDEKQRVPVDKSRFERWK 123

Query: 222 LTGVIALSDSQLKVIPDEVWACGSSVRLLDISKNSIQEVHTKIGSLSSLQKLLLNANDIA 43
            TGVIALSD  LKVIP+EVW+C +S R+LD+S NSI  V +++GSLS LQKLLLN N+I+
Sbjct: 124 ATGVIALSDCNLKVIPNEVWSCETSARVLDLSNNSINRVPSQVGSLSKLQKLLLNVNEIS 183

Query: 42  DESLSWQGVTALK 4
           DES+SW G   LK
Sbjct: 184 DESISWNGFPFLK 196


>ref|XP_004143220.1| PREDICTED: uncharacterized protein LOC101207176 [Cucumis sativus]
          Length = 1290

 Score =  233 bits (595), Expect = 2e-59
 Identities = 122/205 (59%), Positives = 157/205 (76%), Gaps = 4/205 (1%)
 Frame = -1

Query: 606  ASSATSE----MMTVHVKFSGRSIPISLSLNSTIKDLKTLLQPLTNVLPRGQKLIFKGKF 439
            A++ TSE     ++++VKF+G+SIPI+L  +ST+KDLK+LLQPLTNVLPRGQKLIFKGK 
Sbjct: 917  ATATTSEPNRKSISINVKFTGKSIPITLPPDSTVKDLKSLLQPLTNVLPRGQKLIFKGKV 976

Query: 438  LMDTMVLSGSDIRNGAKLMLMASQGLHQGDGFITKEKSTPSNLRKPALVDGDRAVQDKVV 259
            L D M L+ S++ NGAK+MLMASQGLHQGDG I +E  T    R+ ++ +  + V +K  
Sbjct: 977  LADEMTLAASEVANGAKMMLMASQGLHQGDGPILREART--RPRERSVQNASKLVDEKQR 1034

Query: 258  VNVDKTRTERWKLTGVIALSDSQLKVIPDEVWACGSSVRLLDISKNSIQEVHTKIGSLSS 79
            V VDK+R ERWK TGVIALSD  LKVIP+EVW+C +S R+LD+S NSI  V +++GSLS 
Sbjct: 1035 VPVDKSRFERWKATGVIALSDCNLKVIPNEVWSCETSARVLDLSNNSINRVPSQVGSLSK 1094

Query: 78   LQKLLLNANDIADESLSWQGVTALK 4
            LQKLLLN N+I+DES+SW G    K
Sbjct: 1095 LQKLLLNVNEISDESISWNGFPFFK 1119


>ref|XP_002526616.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223534056|gb|EEF35775.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 353

 Score =  228 bits (581), Expect = 7e-58
 Identities = 118/203 (58%), Positives = 147/203 (72%)
 Frame = -1

Query: 612 MEASSATSEMMTVHVKFSGRSIPISLSLNSTIKDLKTLLQPLTNVLPRGQKLIFKGKFLM 433
           ME   + S  + + VKFSGRSIPIS+SLNST++DLK LLQPLTNVLPRGQKLI KG+ L 
Sbjct: 1   MEGEDSNSNTINITVKFSGRSIPISVSLNSTVRDLKCLLQPLTNVLPRGQKLICKGRVLT 60

Query: 432 DTMVLSGSDIRNGAKLMLMASQGLHQGDGFITKEKSTPSNLRKPALVDGDRAVQDKVVVN 253
           DTM L  S++ NG K+ML+ASQGLHQG G + K+      LR  A    ++ V  K  V 
Sbjct: 61  DTMTLMQSELTNGVKIMLVASQGLHQGGGPMLKDAKARPILRTNA--TNNKTVNQKAEVF 118

Query: 252 VDKTRTERWKLTGVIALSDSQLKVIPDEVWACGSSVRLLDISKNSIQEVHTKIGSLSSLQ 73
           V K   ERWK+TGVIAL++  L+VIPDEVWACG   R+LD+S N IQ++ TKI SLSS+Q
Sbjct: 119 VYKNHLERWKVTGVIALAECNLQVIPDEVWACGILTRVLDVSNNCIQDIPTKISSLSSMQ 178

Query: 72  KLLLNANDIADESLSWQGVTALK 4
           KL+LN N ++DES+ W+G T LK
Sbjct: 179 KLILNGNGMSDESIQWEGFTFLK 201


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