BLASTX nr result

ID: Coptis21_contig00022254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022254
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633573.1| PREDICTED: putative tRNA (cytidine(34)-2'-O)...   279   1e-73
emb|CBI24859.3| unnamed protein product [Vitis vinifera]              279   1e-73
gb|AFK35297.1| unknown [Lotus japonicus]                              275   2e-72
ref|XP_003599101.1| tRNA/rRNA methyltransferase, putative [Medic...   268   3e-70
ref|NP_001239897.1| uncharacterized protein LOC100813874 [Glycin...   268   3e-70

>ref|XP_003633573.1| PREDICTED: putative tRNA (cytidine(34)-2'-O)-methyltransferase-like
           [Vitis vinifera]
          Length = 292

 Score =  279 bits (714), Expect = 1e-73
 Identities = 134/168 (79%), Positives = 150/168 (89%)
 Frame = +3

Query: 3   IARTCAASSVGLHLVEPLGYKVDDSKLKRAGLDYWPYVVVKIHNSWSDFIDYFRQQEGEK 182
           IARTCAAS+VGLHL+EPLG++VDD+KLKRAGLDYWPYVVVK+H+SW++F +YFRQQEGEK
Sbjct: 127 IARTCAASAVGLHLIEPLGFQVDDAKLKRAGLDYWPYVVVKVHDSWAEFREYFRQQEGEK 186

Query: 183 RLLAFTKRAASIHSDFSYRRGDWLIFGSETSGLPPEVLLDCKTEGSGGAALRIPMVETYV 362
           RLLAFTKR  +IHSDFSYR+GDWLIFGSET GLPPE LLDCK+E  GG  +RIPMVETYV
Sbjct: 187 RLLAFTKRGTNIHSDFSYRKGDWLIFGSETCGLPPEALLDCKSEALGGGTIRIPMVETYV 246

Query: 363 RCLNLSVSVGIALYEASRQLNYEQLQYASDTETCIDSQIPLITEDIFA 506
           RCLNLSVSVGIALYEASRQLNYEQLQ+ SD  T  DS    +TEDIFA
Sbjct: 247 RCLNLSVSVGIALYEASRQLNYEQLQFPSDPPT--DSSKSFLTEDIFA 292


>emb|CBI24859.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score =  279 bits (714), Expect = 1e-73
 Identities = 134/168 (79%), Positives = 150/168 (89%)
 Frame = +3

Query: 3   IARTCAASSVGLHLVEPLGYKVDDSKLKRAGLDYWPYVVVKIHNSWSDFIDYFRQQEGEK 182
           IARTCAAS+VGLHL+EPLG++VDD+KLKRAGLDYWPYVVVK+H+SW++F +YFRQQEGEK
Sbjct: 85  IARTCAASAVGLHLIEPLGFQVDDAKLKRAGLDYWPYVVVKVHDSWAEFREYFRQQEGEK 144

Query: 183 RLLAFTKRAASIHSDFSYRRGDWLIFGSETSGLPPEVLLDCKTEGSGGAALRIPMVETYV 362
           RLLAFTKR  +IHSDFSYR+GDWLIFGSET GLPPE LLDCK+E  GG  +RIPMVETYV
Sbjct: 145 RLLAFTKRGTNIHSDFSYRKGDWLIFGSETCGLPPEALLDCKSEALGGGTIRIPMVETYV 204

Query: 363 RCLNLSVSVGIALYEASRQLNYEQLQYASDTETCIDSQIPLITEDIFA 506
           RCLNLSVSVGIALYEASRQLNYEQLQ+ SD  T  DS    +TEDIFA
Sbjct: 205 RCLNLSVSVGIALYEASRQLNYEQLQFPSDPPT--DSSKSFLTEDIFA 250


>gb|AFK35297.1| unknown [Lotus japonicus]
          Length = 259

 Score =  275 bits (704), Expect = 2e-72
 Identities = 135/168 (80%), Positives = 148/168 (88%)
 Frame = +3

Query: 3   IARTCAASSVGLHLVEPLGYKVDDSKLKRAGLDYWPYVVVKIHNSWSDFIDYFRQQEGEK 182
           IARTCAAS+VGLHLV PLGYKVDD+KLKRAGLDYWPYVVVKIHNSW DF DYFRQQEGEK
Sbjct: 94  IARTCAASAVGLHLVGPLGYKVDDTKLKRAGLDYWPYVVVKIHNSWEDFRDYFRQQEGEK 153

Query: 183 RLLAFTKRAASIHSDFSYRRGDWLIFGSETSGLPPEVLLDCKTEGSGGAALRIPMVETYV 362
           RLLAFTKR   IHS+FSY++GD+L+FG+ET+GLPPE LLDCKT+  GG  L+IPMVETYV
Sbjct: 154 RLLAFTKRGTKIHSEFSYKKGDYLLFGAETTGLPPEALLDCKTKPFGGGTLKIPMVETYV 213

Query: 363 RCLNLSVSVGIALYEASRQLNYEQLQYASDTETCIDSQIPLITEDIFA 506
           RCLNLSVSVGIALYEASRQLNYEQ Q  S  ETCI ++  LITEDI A
Sbjct: 214 RCLNLSVSVGIALYEASRQLNYEQFQIPS--ETCIPTEETLITEDILA 259


>ref|XP_003599101.1| tRNA/rRNA methyltransferase, putative [Medicago truncatula]
           gi|355488149|gb|AES69352.1| tRNA/rRNA methyltransferase,
           putative [Medicago truncatula]
          Length = 278

 Score =  268 bits (686), Expect = 3e-70
 Identities = 134/168 (79%), Positives = 146/168 (86%), Gaps = 1/168 (0%)
 Frame = +3

Query: 3   IARTCAASSVGLHLVEPLGYKVDDSKLKRAGLDYWPYVVVKIHNSWSDFIDYFRQQEGEK 182
           IARTCAAS+VGLHLV PLGYKVDD+KLKRAGLDYWPYVVVKIH+SW  F DYF QQEGEK
Sbjct: 112 IARTCAASAVGLHLVGPLGYKVDDTKLKRAGLDYWPYVVVKIHDSWEGFRDYFLQQEGEK 171

Query: 183 RLLAFTKRAASIHSDFSYRRGDWLIFGSETSGLPPEVLLDCKTEGSGGAALRIPMVETYV 362
           RLLAFTKR   IHSDFSYR+GD+L+FG+ET+GLPPE LLDCKTE  GG  ++IPMVETYV
Sbjct: 172 RLLAFTKRGTKIHSDFSYRKGDYLLFGAETTGLPPEALLDCKTEPFGGGTIKIPMVETYV 231

Query: 363 RCLNLSVSVGIALYEASRQLNYEQLQYASDTETCIDS-QIPLITEDIF 503
           RCLNLSVSVGIALYEASRQLNYE LQ  S  ETCID+ +   ITEDIF
Sbjct: 232 RCLNLSVSVGIALYEASRQLNYESLQIPS--ETCIDTEEESFITEDIF 277


>ref|NP_001239897.1| uncharacterized protein LOC100813874 [Glycine max]
           gi|255638690|gb|ACU19650.1| unknown [Glycine max]
          Length = 260

 Score =  268 bits (686), Expect = 3e-70
 Identities = 134/169 (79%), Positives = 148/169 (87%), Gaps = 1/169 (0%)
 Frame = +3

Query: 3   IARTCAASSVGLHLVEPLGYKVDDSKLKRAGLDYWPYVVVKIHNSWSDFIDYFRQQEGEK 182
           IARTCAAS+VGLHLV PLG++VDD+KLKRAGLDYWPYVVVKIH+SW DF +YFRQQEGEK
Sbjct: 94  IARTCAASAVGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKIHDSWEDFHNYFRQQEGEK 153

Query: 183 RLLAFTKRAASIHSDFSYRRGDWLIFGSETSGLPPEVLLDCKTEGSGGAALRIPMVETYV 362
           RLLAFTKR   IHS+FSYR+GD+LIFGSETSGLPPE LLDCKTE  GG  ++IPMVETYV
Sbjct: 154 RLLAFTKRGTKIHSEFSYRKGDYLIFGSETSGLPPEALLDCKTEPFGGGTIKIPMVETYV 213

Query: 363 RCLNLSVSVGIALYEASRQLNYEQLQYASDTETCID-SQIPLITEDIFA 506
           RCLNLSVSVGIALYEASRQLNYE LQ  S  E+CID ++   I EDIFA
Sbjct: 214 RCLNLSVSVGIALYEASRQLNYESLQVPS--ESCIDTTEESFIAEDIFA 260


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