BLASTX nr result

ID: Coptis21_contig00022242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022242
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271577.1| PREDICTED: probable LRR receptor-like serine...   275   4e-72
ref|XP_002308399.1| predicted protein [Populus trichocarpa] gi|2...   263   3e-68
ref|XP_002325137.1| predicted protein [Populus trichocarpa] gi|2...   258   8e-67
ref|XP_002532956.1| ATP binding protein, putative [Ricinus commu...   256   2e-66
ref|XP_003549546.1| PREDICTED: probable LRR receptor-like serine...   234   1e-59

>ref|XP_002271577.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g24230 [Vitis vinifera]
          Length = 853

 Score =  275 bits (704), Expect = 4e-72
 Identities = 146/208 (70%), Positives = 162/208 (77%)
 Frame = +3

Query: 3   GMGLSGVIPETTVGKLRMLQTLDLSNNKITSLSSDFWSLGTSLKYLNLSCNQISGSVPSN 182
           G+GLSG+IP+TT+GKL  LQ+LDLSNNKIT LSSDFWSLG SLK LNLS N ISGS+PSN
Sbjct: 74  GLGLSGLIPDTTIGKLSKLQSLDLSNNKITGLSSDFWSLG-SLKALNLSSNLISGSLPSN 132

Query: 183 IGNFGILERLDLSFNNLYGDIPASISSLLSLQHLGLRGNGFAGNIPAGILNCQNLVSIDL 362
           IGNFG+LE LDLS NN  G+IPA+ISSL SLQ L L  NGF  NIP GILNCQ+LVS+DL
Sbjct: 133 IGNFGVLEILDLSNNNFSGEIPAAISSLTSLQVLKLDHNGFEWNIPLGILNCQSLVSMDL 192

Query: 363 SLNQLNGTVPDGFGXXXXXXXXXXXXGNEIRGRYSDFSVFKSMTYLNISNNLFQGSLTGV 542
           S N+ NGTVPDGFG            GNEI GR SDF   KS+T LNIS N FQGS+  V
Sbjct: 193 SFNRFNGTVPDGFGAAFPKIRILNLAGNEIHGRVSDFLELKSITVLNISRNQFQGSVMAV 252

Query: 543 FLEPLEVIDLSRNQFQGHISQVHFNSSF 626
           F EPL+VIDLS+N FQGHISQVH NSSF
Sbjct: 253 FQEPLQVIDLSKNHFQGHISQVHSNSSF 280



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/109 (38%), Positives = 58/109 (53%)
 Frame = +3

Query: 66  LDLSNNKITSLSSDFWSLGTSLKYLNLSCNQISGSVPSNIGNFGILERLDLSFNNLYGDI 245
           LDLS N ++     + +   +LKYLNL+ N+ S      IG    LE L+LS   L G I
Sbjct: 288 LDLSENDLSGEIFHYLNEAQNLKYLNLAHNRFSEQEFPQIGMLFSLEYLNLSETRLTGPI 347

Query: 246 PASISSLLSLQHLGLRGNGFAGNIPAGILNCQNLVSIDLSLNQLNGTVP 392
           P  IS L SL  L L  N  +G +P  + + +NL   D+S N L+G +P
Sbjct: 348 PTDISQLSSLNTLDLSKNHLSGQVP--LPSIKNLQIFDISHNNLSGEIP 394


>ref|XP_002308399.1| predicted protein [Populus trichocarpa] gi|222854375|gb|EEE91922.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score =  263 bits (671), Expect = 3e-68
 Identities = 137/208 (65%), Positives = 164/208 (78%)
 Frame = +3

Query: 3   GMGLSGVIPETTVGKLRMLQTLDLSNNKITSLSSDFWSLGTSLKYLNLSCNQISGSVPSN 182
           G+GLSG IP+TT+GKL  LQTLDLSNNKITSL SD WSLGT LK LNLS NQISG +P+N
Sbjct: 74  GLGLSGSIPDTTIGKLSKLQTLDLSNNKITSLPSDLWSLGT-LKVLNLSSNQISGPLPNN 132

Query: 183 IGNFGILERLDLSFNNLYGDIPASISSLLSLQHLGLRGNGFAGNIPAGILNCQNLVSIDL 362
           IGNFG LE +DLS NN  G+IPA+ISSL  L+ L L  NGF G+IP+GIL+CQ+L  IDL
Sbjct: 133 IGNFGALETIDLSSNNFSGEIPAAISSLGGLRVLKLDRNGFEGSIPSGILSCQSLYFIDL 192

Query: 363 SLNQLNGTVPDGFGXXXXXXXXXXXXGNEIRGRYSDFSVFKSMTYLNISNNLFQGSLTGV 542
           S+N+L+G++PDGFG            GN I+GR SDFS+ KS+T LNIS N FQGS+ GV
Sbjct: 193 SMNKLDGSLPDGFGAAFPKLKTLNLAGNGIQGRDSDFSLMKSITSLNISGNSFQGSVMGV 252

Query: 543 FLEPLEVIDLSRNQFQGHISQVHFNSSF 626
           F E +EV+DLS+NQFQGHISQVHFNS++
Sbjct: 253 FQELVEVMDLSKNQFQGHISQVHFNSTY 280



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
 Frame = +3

Query: 54  MLQTLDLSNNKITSLSSDFWSLGT----SLKYLNLSCNQISGSVPSNIGNFGILERLDLS 221
           +++ +DLS N+     S      T     L YL+LS NQ+SG +  +      L+ L+L+
Sbjct: 256 LVEVMDLSKNQFQGHISQVHFNSTYNWSRLVYLDLSENQLSGEIFQDFSQAPNLKYLNLA 315

Query: 222 FNNLYGDIPASISSLLSLQHLGLRGNGFAGNIPAGILNCQNLVSIDLSLNQLNGTVP 392
           FN    +    I  L  L++L L      G+IP+ I    +L ++DLS N L+G +P
Sbjct: 316 FNRFTKEDFPRIDMLSELEYLNLSKTSVTGHIPSEIAQLSSLHTLDLSQNHLSGQIP 372


>ref|XP_002325137.1| predicted protein [Populus trichocarpa] gi|222866571|gb|EEF03702.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score =  258 bits (658), Expect = 8e-67
 Identities = 133/208 (63%), Positives = 163/208 (78%)
 Frame = +3

Query: 3   GMGLSGVIPETTVGKLRMLQTLDLSNNKITSLSSDFWSLGTSLKYLNLSCNQISGSVPSN 182
           G+GLSG IP+TT+GKL  LQTLDLSNNKITS  SD WSLG  L  LNLS N+ISG +PSN
Sbjct: 74  GLGLSGSIPDTTIGKLSKLQTLDLSNNKITSFPSDLWSLGF-LNLLNLSSNKISGPLPSN 132

Query: 183 IGNFGILERLDLSFNNLYGDIPASISSLLSLQHLGLRGNGFAGNIPAGILNCQNLVSIDL 362
           +GNFG+LE +DLS NN  G+IPA+ISSL+SL+ L L  NGF G+IP+GIL+CQ+L  IDL
Sbjct: 133 VGNFGVLETIDLSSNNFSGEIPAAISSLVSLRVLKLERNGFEGSIPSGILSCQSLHFIDL 192

Query: 363 SLNQLNGTVPDGFGXXXXXXXXXXXXGNEIRGRYSDFSVFKSMTYLNISNNLFQGSLTGV 542
           S+N+L+G++PDGFG            GN I+GR SDFS+ KS+T LNIS N FQGS+ GV
Sbjct: 193 SMNKLDGSLPDGFGAAFPKLKTLNLAGNGIQGRDSDFSLMKSITTLNISGNSFQGSVMGV 252

Query: 543 FLEPLEVIDLSRNQFQGHISQVHFNSSF 626
           F E LEV+DLS+NQF+GHISQV FNS++
Sbjct: 253 FQELLEVMDLSKNQFEGHISQVQFNSTY 280



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
 Frame = +3

Query: 54  MLQTLDLSNNKITSLSSDFWSLGT----SLKYLNLSCNQISGSVPSNIGNFGILERLDLS 221
           +L+ +DLS N+     S      T     L YL+LS NQ+SG +  +  +   L+ L+L+
Sbjct: 256 LLEVMDLSKNQFEGHISQVQFNSTYNWSRLVYLDLSDNQLSGEIFHDFSHASNLKYLNLA 315

Query: 222 FNNLYGDIPASISSLLSLQHLGLRGNGFAGNIPAGILNCQNLVSIDLSLNQLNGTVP 392
           FN    +    I  L  L++L L     +G+IP+ I    NL ++DLS N L+G +P
Sbjct: 316 FNRFTEEEFPRIDMLSELEYLNLSKTSLSGHIPSEITQLSNLHTLDLSQNHLSGRIP 372


>ref|XP_002532956.1| ATP binding protein, putative [Ricinus communis]
           gi|223527266|gb|EEF29422.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 839

 Score =  256 bits (655), Expect = 2e-66
 Identities = 137/208 (65%), Positives = 158/208 (75%)
 Frame = +3

Query: 3   GMGLSGVIPETTVGKLRMLQTLDLSNNKITSLSSDFWSLGTSLKYLNLSCNQISGSVPSN 182
           G GLSG IP+ T+GKL  L+TLDLSNNKIT+L SD WSLG SL  LNLS NQ+SG + SN
Sbjct: 59  GYGLSGSIPDITIGKLTKLRTLDLSNNKITALPSDLWSLG-SLITLNLSSNQVSGFLASN 117

Query: 183 IGNFGILERLDLSFNNLYGDIPASISSLLSLQHLGLRGNGFAGNIPAGILNCQNLVSIDL 362
           IGNFG+LE +DLS NN  G+IPA+ISSL SL+ L L  NGF G+IP GILNC++L  IDL
Sbjct: 118 IGNFGMLETIDLSSNNFSGEIPAAISSLSSLRVLKLNRNGFQGSIPVGILNCRSLTLIDL 177

Query: 363 SLNQLNGTVPDGFGXXXXXXXXXXXXGNEIRGRYSDFSVFKSMTYLNISNNLFQGSLTGV 542
           SLN+L+G++PDGFG            GN I+GR SDF   KS+T LNIS NLF G + GV
Sbjct: 178 SLNKLDGSLPDGFGAAFPKLKSLNIAGNRIKGRDSDFLEMKSITSLNISQNLFHGPVMGV 237

Query: 543 FLEPLEVIDLSRNQFQGHISQVHFNSSF 626
           FLE LEVIDLSRNQFQGHISQV FNSSF
Sbjct: 238 FLEMLEVIDLSRNQFQGHISQVQFNSSF 265



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
 Frame = +3

Query: 48  LRMLQTLDLSNNKI------TSLSSDF-WSLGTSLKYLNLSCNQISGSVPSNIGNFGILE 206
           L ML+ +DLS N+          +S F WS    L +L+LS NQ+SG +  N+     L+
Sbjct: 239 LEMLEVIDLSRNQFQGHISQVQFNSSFNWS---HLIHLDLSENQLSGDIFPNLNQAQNLK 295

Query: 207 RLDLSFNNLYGDIPASISSLLSLQHLGLRGNGFAGNIPAGILNCQNLVSIDLSLNQLNGT 386
            L+L+FN         I  L  L++L L      G +P+ +     L ++DLS N L+G 
Sbjct: 296 HLNLAFNRFARQEIPQIDMLWELEYLNLSKTSLIGLVPSKVAQLSKLHTLDLSDNHLSGH 355

Query: 387 VP 392
           +P
Sbjct: 356 IP 357


>ref|XP_003549546.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g24230-like [Glycine max]
          Length = 853

 Score =  234 bits (596), Expect = 1e-59
 Identities = 126/207 (60%), Positives = 150/207 (72%)
 Frame = +3

Query: 3   GMGLSGVIPETTVGKLRMLQTLDLSNNKITSLSSDFWSLGTSLKYLNLSCNQISGSVPSN 182
           GM LSG IP+ T+GKL  LQ+LDLS+NKIT L SDFWSL T +K LNLS NQISGS+ +N
Sbjct: 75  GMDLSGTIPDNTIGKLGKLQSLDLSHNKITDLPSDFWSLST-VKSLNLSSNQISGSLTNN 133

Query: 183 IGNFGILERLDLSFNNLYGDIPASISSLLSLQHLGLRGNGFAGNIPAGILNCQNLVSIDL 362
           IGNFG+LE +DLS NN   +IP ++SSLLSL+ L L  N FA NIP+GIL CQ+LVSID+
Sbjct: 134 IGNFGLLESIDLSSNNFSEEIPEAVSSLLSLRVLKLDQNRFAHNIPSGILKCQSLVSIDV 193

Query: 363 SLNQLNGTVPDGFGXXXXXXXXXXXXGNEIRGRYSDFSVFKSMTYLNISNNLFQGSLTGV 542
           S NQLNGT+P+GFG            GN + G  SD S  KS+  LNIS N FQGS+  +
Sbjct: 194 SSNQLNGTLPEGFGAAFPKLRVLNLSGNNMYGHISDISGLKSIVNLNISGNSFQGSIVDL 253

Query: 543 FLEPLEVIDLSRNQFQGHISQVHFNSS 623
           F   LEV+DLSRNQFQGHI QV +N S
Sbjct: 254 FQGRLEVLDLSRNQFQGHIPQVLYNFS 280



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
 Frame = +3

Query: 3   GMGLSGVIPETTVGKLRMLQTLDLSNNK--------ITSLSSDFWSLGTSLKYLNLSCNQ 158
           G    G I +   G+L   + LDLS N+        + + SS  WS    L YL+LS N+
Sbjct: 243 GNSFQGSIVDLFQGRL---EVLDLSRNQFQGHIPQVLYNFSSYNWS---HLVYLDLSENK 296

Query: 159 ISGSVPSNIGNFGILERLDLSFNNLYGDIPASISSLLSLQHLGLRGNGFAGNIPAGILNC 338
           +SG    N+     L+ ++L+ N         I  LL L++L L      G IP  I   
Sbjct: 297 LSGDFFQNLNESLNLKHINLAHNRFARQKFPQIEMLLKLEYLNLSKTSLGGEIPHEISQM 356

Query: 339 QNLVSIDLSLNQLNGTVP 392
            NL ++DLS+N L+G +P
Sbjct: 357 SNLSALDLSMNHLSGRIP 374


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