BLASTX nr result

ID: Coptis21_contig00022223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022223
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518547.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a...    90   2e-16
ref|XP_002305684.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
gb|ACN33808.1| unknown [Zea mays] gi|414884546|tpg|DAA60560.1| T...    89   5e-16
gb|ACF80647.1| unknown [Zea mays]                                      89   5e-16
ref|XP_002459821.1| hypothetical protein SORBIDRAFT_02g011290 [S...    86   4e-15

>ref|XP_002518547.1| UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase,
           putative [Ricinus communis] gi|223542392|gb|EEF43934.1|
           UDP-3-O-[3-hydroxymyristoyl] glucosamine
           N-acyltransferase, putative [Ricinus communis]
          Length = 247

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/50 (84%), Positives = 44/50 (88%)
 Frame = +3

Query: 3   HVSIASKVRLAANSCVTKDIREPGDYGGFPAVPINEWRRQIASVRWNFKK 152
           HVSIAS+VRLAANSCVTKDIREPGDYGGFPAVPI EWRRQ+A   W  KK
Sbjct: 195 HVSIASRVRLAANSCVTKDIREPGDYGGFPAVPIREWRRQVAYCCWISKK 244


>ref|XP_002305684.1| predicted protein [Populus trichocarpa] gi|222848648|gb|EEE86195.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +3

Query: 3   HVSIASKVRLAANSCVTKDIREPGDYGGFPAVPINEWRRQIAS 131
           HVSIASKVRLAANSCVTKDIREPGDYGGFPAVPI+EWRRQ+AS
Sbjct: 183 HVSIASKVRLAANSCVTKDIREPGDYGGFPAVPIHEWRRQVAS 225


>gb|ACN33808.1| unknown [Zea mays] gi|414884546|tpg|DAA60560.1| TPA: hypothetical
           protein ZEAMMB73_921630 [Zea mays]
          Length = 280

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   HVSIASKVRLAANSCVTKDIREPGDYGGFPAVPINEWRRQIASVRWNFKKGT 158
           HVS+ASKVRLAANS VTKDI+EPGDYGGFPAVPINEWRRQIA++R   KK +
Sbjct: 226 HVSVASKVRLAANSLVTKDIQEPGDYGGFPAVPINEWRRQIANLRLFSKKAS 277


>gb|ACF80647.1| unknown [Zea mays]
          Length = 83

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   HVSIASKVRLAANSCVTKDIREPGDYGGFPAVPINEWRRQIASVRWNFKKGT 158
           HVS+ASKVRLAANS VTKDI+EPGDYGGFPAVPINEWRRQIA++R   KK +
Sbjct: 29  HVSVASKVRLAANSLVTKDIQEPGDYGGFPAVPINEWRRQIANLRLFSKKAS 80


>ref|XP_002459821.1| hypothetical protein SORBIDRAFT_02g011290 [Sorghum bicolor]
           gi|241923198|gb|EER96342.1| hypothetical protein
           SORBIDRAFT_02g011290 [Sorghum bicolor]
          Length = 285

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/50 (82%), Positives = 44/50 (88%)
 Frame = +3

Query: 3   HVSIASKVRLAANSCVTKDIREPGDYGGFPAVPINEWRRQIASVRWNFKK 152
           HVSI SKVRL ANS VTKDI+EPGDYGGFPAVPINEWRRQIA++R   KK
Sbjct: 231 HVSIVSKVRLVANSLVTKDIQEPGDYGGFPAVPINEWRRQIANMRLFSKK 280


Top