BLASTX nr result

ID: Coptis21_contig00022210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022210
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167617.1| PREDICTED: outer envelope pore protein 16, c...    98   3e-18
ref|XP_004151033.1| PREDICTED: LOW QUALITY PROTEIN: outer envelo...    97   7e-18
emb|CAA63967.1| pom14 [Solanum tuberosum]                              97   7e-18
ref|NP_001054446.1| Os05g0111200 [Oryza sativa Japonica Group] g...    97   7e-18
ref|XP_002283749.1| PREDICTED: uncharacterized protein LOC100255...    95   2e-17

>ref|XP_004167617.1| PREDICTED: outer envelope pore protein 16, chloroplastic-like
           [Cucumis sativus]
          Length = 146

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 55/137 (40%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
 Frame = +3

Query: 336 TSSTSNMGLVIDTGIHFVNRIIDAVLIFXXXXXXXXXXXXXY--KSRGHVSKNTLKPLFQ 509
           +SST  + +VIDTG  F+N  +D  L               Y     G +S +  +   +
Sbjct: 9   SSSTPKIDVVIDTGYPFLNLTVDGFLKIGSVAATRAAAEDAYFVVKNGAISSHKFENTLK 68

Query: 510 KMCREGAYWXXXXXXXXXXXXXXXIILSTGDWKNAMLRGVLTGALVSVAYDNGKDKVVQN 689
           KMC+EGAYW                I  T DWKNAM+ G LTGALVS A +N +DKVV +
Sbjct: 69  KMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNNNRDKVVID 128

Query: 690 AVTGGAIATGVELLCYL 740
           A+TGGA+AT  E + YL
Sbjct: 129 AITGGAVATAAEFINYL 145


>ref|XP_004151033.1| PREDICTED: LOW QUALITY PROTEIN: outer envelope pore protein 16,
           chloroplastic-like [Cucumis sativus]
          Length = 197

 Score = 96.7 bits (239), Expect = 7e-18
 Identities = 55/147 (37%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
 Frame = +3

Query: 312 KSKYSGIFTSSTSNMGLVIDTGIHFVNRIIDAVLIFXXXXXXXXXXXXX----YKSRGHV 479
           + +Y  + +SST  + +VIDTG  F+N  ++    F                     G +
Sbjct: 50  RHRYGFVGSSSTPKIDVVIDTGYPFLNLTVNGFFFFFFLXVAATRAAAEDAYFVVKNGAI 109

Query: 480 SKNTLKPLFQKMCREGAYWXXXXXXXXXXXXXXXIILSTGDWKNAMLRGVLTGALVSVAY 659
           S +  +   +KMC+EGAYW                I  T DWKNAM+ G LTGALVS A 
Sbjct: 110 SSHKFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAAS 169

Query: 660 DNGKDKVVQNAVTGGAIATGVELLCYL 740
           +N +DKVV +A+TGGA+AT  E + YL
Sbjct: 170 NNNRDKVVIDAITGGAVATAAEFINYL 196


>emb|CAA63967.1| pom14 [Solanum tuberosum]
          Length = 146

 Score = 96.7 bits (239), Expect = 7e-18
 Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 2/145 (1%)
 Frame = +3

Query: 312 KSKYSGIFTSSTSNMGLVIDTGIHFVNRIIDAVLIFXXXXXXXXXXXXXYK--SRGHVSK 485
           +S+++G   S    + + ID G  F+N  +DA L               Y   +RG VS 
Sbjct: 3   RSRFAGSLISP--KVDVYIDMGNPFLNHTVDAFLNIGTVAATKTVAEETYGMVTRGSVSS 60

Query: 486 NTLKPLFQKMCREGAYWXXXXXXXXXXXXXXXIILSTGDWKNAMLRGVLTGALVSVAYDN 665
           +  +   +KMC+EGAYW                I  T DWKNAM+ G LTGAL+S A +N
Sbjct: 61  HNFEKSLKKMCKEGAYWGTVAGVYAGMEYGAERIRGTNDWKNAMIGGALTGALISAACNN 120

Query: 666 GKDKVVQNAVTGGAIATGVELLCYL 740
            +DK+V +A+TGGA+AT  E L YL
Sbjct: 121 NRDKIVMDAITGGAVATASEFLNYL 145


>ref|NP_001054446.1| Os05g0111200 [Oryza sativa Japonica Group]
           gi|52353640|gb|AAU44206.1| putative amino acid selective
           channel protein [Oryza sativa Japonica Group]
           gi|113577997|dbj|BAF16360.1| Os05g0111200 [Oryza sativa
           Japonica Group] gi|215678754|dbj|BAG95191.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218195962|gb|EEC78389.1| hypothetical protein
           OsI_18168 [Oryza sativa Indica Group]
           gi|222629946|gb|EEE62078.1| hypothetical protein
           OsJ_16862 [Oryza sativa Japonica Group]
          Length = 146

 Score = 96.7 bits (239), Expect = 7e-18
 Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 2/135 (1%)
 Frame = +3

Query: 342 STSNMGLVIDTGIHFVNRIIDAVLIFXXXXXXXXXXXXXYKS--RGHVSKNTLKPLFQKM 515
           S+  + + ID G  F+NR +D  L               +    RG VSK+ L+ + +KM
Sbjct: 11  SSPRIDVAIDMGNPFLNRTVDGFLKIGAVGACKVAAEDTFDCLHRGDVSKHKLEHMLKKM 70

Query: 516 CREGAYWXXXXXXXXXXXXXXXIILSTGDWKNAMLRGVLTGALVSVAYDNGKDKVVQNAV 695
           C+EGAYW                I    DWKNAM+ G L+GAL+S A +N KDK++++A+
Sbjct: 71  CKEGAYWGTVAGVYVGMEYGVERIRGRHDWKNAMIGGALSGALISAASNNHKDKIIKDAI 130

Query: 696 TGGAIATGVELLCYL 740
           TGGA+AT VE + YL
Sbjct: 131 TGGAVATAVEFINYL 145


>ref|XP_002283749.1| PREDICTED: uncharacterized protein LOC100255246 [Vitis vinifera]
          Length = 146

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 53/135 (39%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
 Frame = +3

Query: 342 STSNMGLVIDTGIHFVNRIIDAVLIFXXXXXXXXXXXXXYK--SRGHVSKNTLKPLFQKM 515
           ST  + ++ID G  F+N  +D  L               Y    RG +S++T++   +KM
Sbjct: 11  STPRVAVMIDMGNPFLNLTVDGFLKIGTVAAARAAAEEAYYVVKRGSISRHTVEHSLKKM 70

Query: 516 CREGAYWXXXXXXXXXXXXXXXIILSTGDWKNAMLRGVLTGALVSVAYDNGKDKVVQNAV 695
           C+E AYW                I  T DWKNAML G LTGA++S A + G+DK+V  A+
Sbjct: 71  CKEAAYWGTVAGVYVGMEYGAERIRGTRDWKNAMLGGALTGAIISSACEKGRDKIVVGAI 130

Query: 696 TGGAIATGVELLCYL 740
           TGGAIAT  E L YL
Sbjct: 131 TGGAIATAAEFLNYL 145


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