BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022199
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    82   8e-14
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    80   4e-13
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    74   3e-11
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    73   5e-11
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    72   1e-10

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 57/189 (30%), Positives = 81/189 (42%), Gaps = 5/189 (2%)
 Frame = -3

Query: 578 FANGSLHWIAVDARSPNSKPVILSFHLGDEEFTVFPTPESIGVNRDDPLGNCAFGVLDKC 399
           F  G LHWI  D   P+    I     G E F     P  +G N  D  G+   GVL  C
Sbjct: 231 FVGGCLHWIVND---PSKSEFIYCLEFGRELFQPVAAPPHLGPNDKDRTGDMMLGVLGGC 287

Query: 398 LSLVDSSSEQKSDVWVFKDCDGKTSWNKLFSVRK---DMICPYSGRSVRPIPGVKNGGLV 228
           L   D       D+WV K    + SW K F ++    D+I  +               L 
Sbjct: 288 LYFFDYPLGDSFDIWVMKQYGVQESWTKEFILKNPSTDIIWYWD--------------LY 333

Query: 227 RPIQVLKNGEILLTRAFPCLVAYNTNSKEFRLIEV-PLGSFEPIPFVATLVSVISAF-GM 54
           RPI +L NGEIL++     +V+YN   + FR +++  + +FE  P+V + +S      G 
Sbjct: 334 RPISLLSNGEILMSHKSKAMVSYNPEDRSFRFLKIYGIQNFEANPYVPSFLSPREIVKGE 393

Query: 53  NSDGEKLSC 27
           N+D     C
Sbjct: 394 NTDSNSFLC 402


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
 Frame = -3

Query: 680 TLGSKDWRRKICNVPNLSFPNYYFPKYYVHVSFVFANGSLHWIAVDARSPNSKPVILSFH 501
           TLG   WR       +L   +Y   +     S    NG LHW++   R+  ++ ++ SF 
Sbjct: 211 TLGCPGWR-------SLGKVSYRLVR---RASETLVNGRLHWVSRPCRNKPARRLV-SFD 259

Query: 500 LGDEEFTVFPTPESIGVNRDDPLGNCAFGVLDKCLSLVDSSSEQKSDVWVFKDCDGKTSW 321
           L DE+F   P P+  G+NR D        VL  CLS+    +  + ++WV K+ + K SW
Sbjct: 260 LTDEQFREVPKPDCGGLNRCD----YHLAVLRGCLSVAVYCNYGRLEIWVMKEYNVKESW 315

Query: 320 NKLFSVRKDMICPYSGRSVRPIP---GVKNGGLVRPIQVLKNGEILLTRAFPCLVAYNTN 150
            K +++   M        VRP+       NG  VR + VLKNGEILL      LV+Y+  
Sbjct: 316 VKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLEYKNRALVSYDPK 375

Query: 149 SKEFRLIEV 123
             +F+ I++
Sbjct: 376 KGKFKDIDL 384


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 65/190 (34%), Positives = 88/190 (46%), Gaps = 8/190 (4%)
 Frame = -3

Query: 680 TLGSKDWRRKICNVPNLSFPNYYFPKYYVHVSFVFANGSLHWIAVDARSPNSKPVILSFH 501
           TLGS  WR       +L   +Y   ++    S    NG LHW+    R       I+SF 
Sbjct: 212 TLGSPTWR-------SLGKVSYQLDRW---PSEALVNGRLHWVTRPRRYVTR--FIVSFD 259

Query: 500 LGDEEFTVFPTPESIGVNRDDPLGNCAFGVLDKCLSLVDSSSEQKSDVWVFKDCDGKTSW 321
           L DE+F   P P+  G++R     N    VL  CLS     S  K +VWV K+ D K SW
Sbjct: 260 LADEQFREIPKPDCGGLSRC----NYHLLVLGGCLSAAVHRSNGKLEVWVMKEYDVKESW 315

Query: 320 NKLFSV--------RKDMICPYSGRSVRPIPGVKNGGLVRPIQVLKNGEILLTRAFPCLV 165
            K F++        ++D+  P+  R  R  P    G  VR + +LKNGEILL      LV
Sbjct: 316 IKEFNIGAHLPKGLKQDVNRPH--RIWRNAP---KGRGVRLLCLLKNGEILLEYKGRVLV 370

Query: 164 AYNTNSKEFR 135
           +YN    +F+
Sbjct: 371 SYNPERGKFK 380


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 48/152 (31%), Positives = 77/152 (50%)
 Frame = -3

Query: 683 YTLGSKDWRRKICNVPNLSFPNYYFPKYYVHVSFVFANGSLHWIAVDARSPNSKPVILSF 504
           ++L    WRR I ++P        +   Y   + ++ANG+LHW+            I++ 
Sbjct: 176 FSLRKNSWRR-IADMP--------YCVLYPGENGIYANGALHWLVSQDPDSTVADTIVAL 226

Query: 503 HLGDEEFTVFPTPESIGVNRDDPLGNCAFGVLDKCLSLVDSSSEQKSDVWVFKDCDGKTS 324
            LG E++ V P PE + +N      N   GVL  CLSL+  +  ++ DVWV ++   K S
Sbjct: 227 DLGVEDYHVVPKPEFVDMNC-----NMGVGVLQGCLSLLAYARSERVDVWVMEEYMVKES 281

Query: 323 WNKLFSVRKDMICPYSGRSVRPIPGVKNGGLV 228
           W+KLFSV +  +     RS++P+   K+G  V
Sbjct: 282 WSKLFSVARLEVIGIL-RSLKPLAYSKSGNEV 312


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
 Frame = -3

Query: 680 TLGSKDWRRKICNVPNLSFPNYYFPKYYVHVSFVFANGSLHWIAVDARSPNSKPVILSFH 501
           TLG  +WR       +L   +Y   +     S    NG LHWI+   R+  ++ ++ SF 
Sbjct: 212 TLGCPEWR-------SLGKVSYRLVR---RASGALVNGRLHWISRPCRNKPARRLV-SFD 260

Query: 500 LGDEEFTVFPTPESIGVNRDDPLGNCAFGVLDKCLSLVDSSSEQKSDVWVFKDCDGKTSW 321
           L DE+F     P+  G+NR     N    VL  CLS     +  + ++WV K+ + K SW
Sbjct: 261 LTDEQFREVSKPDCGGLNRC----NYHLVVLRGCLSAAVYCNYGRLEIWVMKEYNVKESW 316

Query: 320 NKLFSVRKDM---ICPYSGRSVRPIPGVKNGGLVRPIQVLKNGEILLTRAFPCLVAYNTN 150
            K +++   M   +     R ++      NG +V  + VLKNGEILL      LV+Y+  
Sbjct: 317 VKEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYDPK 376

Query: 149 SKEFRLIEV 123
           + +F+ IE+
Sbjct: 377 NGKFKDIEL 385