BLASTX nr result

ID: Coptis21_contig00022186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022186
         (1670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262981.1| PREDICTED: short-chain dehydrogenase TIC 32,...   421   e-115
ref|XP_002518876.1| short-chain dehydrogenase, putative [Ricinus...   417   e-114
ref|XP_002299444.1| predicted protein [Populus trichocarpa] gi|2...   416   e-114
ref|XP_003530511.1| PREDICTED: WW domain-containing oxidoreducta...   416   e-114
ref|XP_002303676.1| predicted protein [Populus trichocarpa] gi|2...   399   e-109

>ref|XP_002262981.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
            vinifera] gi|297742402|emb|CBI34551.3| unnamed protein
            product [Vitis vinifera]
          Length = 336

 Score =  421 bits (1082), Expect = e-115
 Identities = 222/323 (68%), Positives = 255/323 (78%)
 Frame = -2

Query: 1234 MLETVKYLIGSVGPSGFSSKSTAEQVTEVFPDLPXXXXXXXXXXXXXXXXXARVLAKRGA 1055
            ML+ +KYL+GS G SG+ SKSTAE+VTE  PDL                  ARVLAKRGA
Sbjct: 1    MLDALKYLLGSFGASGYGSKSTAEEVTENCPDLGSVTAVITGATSGIGAETARVLAKRGA 60

Query: 1054 RLVLPARTVXXXXXXXXXXXXEFPDTEIIVMALDLSSLTSVRNFVTDFESXXXXXXXXXX 875
            RLVLPAR++            EFP++EI+VMALDLSSL SVR FV++FES          
Sbjct: 61   RLVLPARSLKAAEEAKARIVAEFPNSEIVVMALDLSSLDSVRCFVSEFESLDLPLNLLIN 120

Query: 874  NAGKFSHEYGISEDGIEMTFATNYLGHFLLTKMLLKKMIETAQRTGYQGRIVNVSSAIHN 695
            NAGKF+HE+ ISEDGIEMTFATNYLGHFLLTK+LL KMIETA++TG QGRIVNVSS IH+
Sbjct: 121  NAGKFTHEHAISEDGIEMTFATNYLGHFLLTKLLLNKMIETAKKTGVQGRIVNVSSTIHS 180

Query: 694  WFSGDGLRYLEQINRKKSFYDPTRAYALSKLANVLHTKELARRLKKMEANVTVNCVHPGV 515
            WFSGD +RYL  I R KS YD TRAYA+SKLANVLHTKELA+RLK+M+ANVTVNCVHPG+
Sbjct: 181  WFSGDVIRYLGLITRNKSQYDATRAYAVSKLANVLHTKELAQRLKQMDANVTVNCVHPGI 240

Query: 514  VKTRLTREREGFLTDLIFFLTSMLLKTIPQAAATTCYVASHPQLLGVSGKYFADCNEASS 335
            V+TRLTRE EG +TDLIFFLTS  LKTIPQAAATTCYVA+HP+L+ VSGKYFADCNEA +
Sbjct: 241  VRTRLTRETEGIVTDLIFFLTSKFLKTIPQAAATTCYVATHPRLVNVSGKYFADCNEAWT 300

Query: 334  SQLGSNLKEASRLWIASEAMTAK 266
            S+LGSN +EASRLW ASE MTA+
Sbjct: 301  SKLGSNSQEASRLWSASEIMTAR 323


>ref|XP_002518876.1| short-chain dehydrogenase, putative [Ricinus communis]
            gi|223541863|gb|EEF43409.1| short-chain dehydrogenase,
            putative [Ricinus communis]
          Length = 339

 Score =  417 bits (1071), Expect = e-114
 Identities = 220/324 (67%), Positives = 256/324 (79%), Gaps = 1/324 (0%)
 Frame = -2

Query: 1234 MLETVKYLIGSVGPSGFSSKSTAEQVTEVFPDLPXXXXXXXXXXXXXXXXXARVLAKRGA 1055
            MLETVKYLIGS GPS F SKSTAEQVTE F DL                  ARVLAK+GA
Sbjct: 1    MLETVKYLIGSAGPSNFGSKSTAEQVTE-FSDLRSVTAIITGATSGIGAETARVLAKQGA 59

Query: 1054 RLVLPARTVXXXXXXXXXXXXEF-PDTEIIVMALDLSSLTSVRNFVTDFESXXXXXXXXX 878
            RLV+PAR++            +F P++EII+MALDLSSL SV+NFV +FES         
Sbjct: 60   RLVIPARSMKAAEEAKARIMSDFKPESEIIIMALDLSSLNSVKNFVAEFESFNLPLNLLI 119

Query: 877  XNAGKFSHEYGISEDGIEMTFATNYLGHFLLTKMLLKKMIETAQRTGYQGRIVNVSSAIH 698
             NAG F+HE+ ISEDGIEMTFATNYLGHFLLTK+LLKKMIETA+ TG QGRIVNVSS+IH
Sbjct: 120  NNAGTFAHEHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKETGVQGRIVNVSSSIH 179

Query: 697  NWFSGDGLRYLEQINRKKSFYDPTRAYALSKLANVLHTKELARRLKKMEANVTVNCVHPG 518
            +WFSGD +RYL +I+R K  YD TRAYALSKLAN+LHTKELA+RLK+MEANVTVNCVHPG
Sbjct: 180  SWFSGDMIRYLGEISRNKCHYDATRAYALSKLANILHTKELAQRLKQMEANVTVNCVHPG 239

Query: 517  VVKTRLTREREGFLTDLIFFLTSMLLKTIPQAAATTCYVASHPQLLGVSGKYFADCNEAS 338
            +V+TRLTREREG LTD++FF+ S LLKTIPQAAATTC+VA+ P+LL VSGKYFADCNEAS
Sbjct: 240  IVRTRLTREREGILTDMVFFMASKLLKTIPQAAATTCFVATSPRLLNVSGKYFADCNEAS 299

Query: 337  SSQLGSNLKEASRLWIASEAMTAK 266
            +S+LGS+  EAS+LW ASE M ++
Sbjct: 300  ASKLGSSSTEASKLWSASEIMVSR 323


>ref|XP_002299444.1| predicted protein [Populus trichocarpa] gi|222846702|gb|EEE84249.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  416 bits (1070), Expect = e-114
 Identities = 222/324 (68%), Positives = 254/324 (78%), Gaps = 1/324 (0%)
 Frame = -2

Query: 1234 MLETVKYLIGSVGPSGFSSKSTAEQVTEVFPDLPXXXXXXXXXXXXXXXXXARVLAKRGA 1055
            M E++KYL GS G SG+ SKST EQVTE   DL                  ARVLAKRGA
Sbjct: 1    MFESLKYLTGSAGASGYGSKSTGEQVTENCGDLHSITAIITGATSGIGAETARVLAKRGA 60

Query: 1054 RLVLPARTVXXXXXXXXXXXXEFPDTEIIVMALDLSSLTSVRNFVTDFESXXXXXXXXXX 875
            RLVLPAR++            E PDTEIIVM LDLSSL SVRNFV++FES          
Sbjct: 61   RLVLPARSLKAAEDAKARIISENPDTEIIVMGLDLSSLNSVRNFVSEFESFDLPLNLLIN 120

Query: 874  NAGKFSHEYGISEDGIEMTFATNYLGHFLLTKMLLKKMIETAQRTGYQGRIVNVSSAIHN 695
            NAGKF+HE+ ISEDGIEMTFATN+LGHFLLTK+LLKKMIETA+ TG QGRIVNVSS+I+N
Sbjct: 121  NAGKFAHEHAISEDGIEMTFATNFLGHFLLTKLLLKKMIETAKTTGIQGRIVNVSSSIYN 180

Query: 694  WFSGDGLRYLEQINRKK-SFYDPTRAYALSKLANVLHTKELARRLKKMEANVTVNCVHPG 518
            WFSGD +RYL QI+R K   +DPTRAYALSKLANVLHTKELA+RLK+MEANVTVNCVHPG
Sbjct: 181  WFSGDPIRYLGQISRNKLRDFDPTRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG 240

Query: 517  VVKTRLTREREGFLTDLIFFLTSMLLKTIPQAAATTCYVASHPQLLGVSGKYFADCNEAS 338
            VV+TRLTREREG +TD+ FFLTS LLKTIPQAAATTCYVA+HP+L+ V+GKYF+DCNEAS
Sbjct: 241  VVRTRLTREREGIVTDMAFFLTSKLLKTIPQAAATTCYVATHPRLVNVTGKYFSDCNEAS 300

Query: 337  SSQLGSNLKEASRLWIASEAMTAK 266
            +S+LGSN  EA+RLW ASE M ++
Sbjct: 301  TSKLGSNSTEAARLWTASEIMVSR 324


>ref|XP_003530511.1| PREDICTED: WW domain-containing oxidoreductase-like isoform 1
            [Glycine max]
          Length = 337

 Score =  416 bits (1069), Expect = e-114
 Identities = 218/323 (67%), Positives = 247/323 (76%)
 Frame = -2

Query: 1234 MLETVKYLIGSVGPSGFSSKSTAEQVTEVFPDLPXXXXXXXXXXXXXXXXXARVLAKRGA 1055
            MLETVKYL+GS GPSGF SK+TAEQVTE   DL                  ARVLAKRGA
Sbjct: 1    MLETVKYLLGSAGPSGFGSKTTAEQVTENHADLRSITAIITGATSGIGTETARVLAKRGA 60

Query: 1054 RLVLPARTVXXXXXXXXXXXXEFPDTEIIVMALDLSSLTSVRNFVTDFESXXXXXXXXXX 875
            RLVLPAR++            E PD+EIIVMALDLSSL SV NFV  F S          
Sbjct: 61   RLVLPARSMKAAEDAKARIVSECPDSEIIVMALDLSSLNSVTNFVAHFHSLGLPLHLLIN 120

Query: 874  NAGKFSHEYGISEDGIEMTFATNYLGHFLLTKMLLKKMIETAQRTGYQGRIVNVSSAIHN 695
            NAGKF+HE+ ISEDG+EMTFATNYLGHF++T +L+KKM+ETA+ TG QGRIVNVSS+IH 
Sbjct: 121  NAGKFAHEHAISEDGVEMTFATNYLGHFVMTNLLVKKMVETAKETGVQGRIVNVSSSIHG 180

Query: 694  WFSGDGLRYLEQINRKKSFYDPTRAYALSKLANVLHTKELARRLKKMEANVTVNCVHPGV 515
            WFSGD + YL  I+R K  YD TRAYALSKLANV HTKELARRL++M ANVTVNCVHPG+
Sbjct: 181  WFSGDAISYLALISRNKRHYDATRAYALSKLANVFHTKELARRLQQMGANVTVNCVHPGI 240

Query: 514  VKTRLTREREGFLTDLIFFLTSMLLKTIPQAAATTCYVASHPQLLGVSGKYFADCNEASS 335
            V+TRLTREREG LTDL+FFL S LLKTIPQAAATTCYVA+HP+LL VSGKYFADCNE S+
Sbjct: 241  VRTRLTREREGLLTDLVFFLASKLLKTIPQAAATTCYVATHPRLLNVSGKYFADCNETST 300

Query: 334  SQLGSNLKEASRLWIASEAMTAK 266
            S+LGSN  EA+RLW ASE M ++
Sbjct: 301  SKLGSNSTEAARLWAASEFMISR 323


>ref|XP_002303676.1| predicted protein [Populus trichocarpa] gi|222841108|gb|EEE78655.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  399 bits (1026), Expect = e-109
 Identities = 217/321 (67%), Positives = 246/321 (76%), Gaps = 1/321 (0%)
 Frame = -2

Query: 1234 MLETVKYLIGSVGPSGFSSKSTAEQVTEVFPDLPXXXXXXXXXXXXXXXXXARVLAKRGA 1055
            M ET+KYL+GS G SG+ SKSTAEQVTE   DL                  ARVLAKRGA
Sbjct: 1    MFETLKYLVGSAGASGYGSKSTAEQVTENCCDLHSITAIITGATSGIGAETARVLAKRGA 60

Query: 1054 RLVLPARTVXXXXXXXXXXXXEFPDTEIIVMALDLSSLTSVRNFVTDFESXXXXXXXXXX 875
            RLVLPAR +            E PD +IIVM LDLSSL SVRNFV++FES          
Sbjct: 61   RLVLPARNLKGAEDAKARILSENPDADIIVMGLDLSSLNSVRNFVSEFESLNLPLNLLIN 120

Query: 874  NAGKFSHEYGISEDGIEMTFATNYLGHFLLTKMLLKKMIETAQRTGYQGRIVNVSSAIHN 695
            NAG+F+ E  ISEDGIEMTFATNYLGHFLLTK+LLKKMIETA+ T  QGRIVNVSS+I+N
Sbjct: 121  NAGRFALEPAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKTTSLQGRIVNVSSSIYN 180

Query: 694  WFSGDGLRYLEQINRKKSF-YDPTRAYALSKLANVLHTKELARRLKKMEANVTVNCVHPG 518
            WFSGD +RYL +I+R K   +DPTRAYALSKLA VLHTKE+A+RLK+MEANVTVNCVHPG
Sbjct: 181  WFSGDMIRYLCEISRNKLCDFDPTRAYALSKLAIVLHTKEVAQRLKQMEANVTVNCVHPG 240

Query: 517  VVKTRLTREREGFLTDLIFFLTSMLLKTIPQAAATTCYVASHPQLLGVSGKYFADCNEAS 338
            VV+TRLTREREG  TD+ FFLTS LLKTIPQAAATTCYVA+HP L+ V+GKYF+DCNEAS
Sbjct: 241  VVRTRLTREREGMATDIAFFLTSKLLKTIPQAAATTCYVATHPTLVNVTGKYFSDCNEAS 300

Query: 337  SSQLGSNLKEASRLWIASEAM 275
            +S+LGSN  EA+RLW ASE M
Sbjct: 301  TSKLGSNSTEAARLWTASEIM 321


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