BLASTX nr result

ID: Coptis21_contig00022174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022174
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39223.3| unnamed protein product [Vitis vinifera]              157   2e-36
ref|XP_002327292.1| predicted protein [Populus trichocarpa] gi|2...   126   3e-27
ref|XP_002278178.2| PREDICTED: uncharacterized protein LOC100241...   111   1e-22
ref|XP_002526401.1| conserved hypothetical protein [Ricinus comm...    83   3e-14
ref|XP_002872481.1| hypothetical protein ARALYDRAFT_327172 [Arab...    55   1e-05

>emb|CBI39223.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score =  157 bits (396), Expect = 2e-36
 Identities = 89/203 (43%), Positives = 119/203 (58%)
 Frame = +1

Query: 1   RFFLDSLEHNKNLYKKHFQVLTEKWKVGVQEHWKDQQCSKELLVHVVKGGETLTSISRLY 180
           RF LDS    +  +KKHF++LTEKW+  +QE  K Q  +K   VH+VK GETL+SIS+ Y
Sbjct: 17  RFCLDSWISKQRSFKKHFRMLTEKWRFQIQEISKGQHSTKHNSVHMVKEGETLSSISKQY 76

Query: 181 GMSVHSIAAVNEKLFDINLVLEGQRLNIPSSGVSNTNKDSMWRIRLYCIKARDRYQHSLT 360
           G+S++SIAA N+ + DI+LV  GQ LNIPSS V  T K    + +L       R+QHSL 
Sbjct: 77  GVSIYSIAAANKNIEDIDLVFCGQHLNIPSSAVGETQKFQTEKSKLSSFDTLKRHQHSLE 136

Query: 361 XXXXXXXXXXXXXXXXFTVLYPRNLLPVRTTGYILVVVPLIAFCIGCIINVFHHRVGEYL 540
                           F      +L   + TGY LV+VPLIAFCI CII  F +RV   L
Sbjct: 137 VLGGRLNQKLCTVALSF-----HSLSHAKATGYFLVLVPLIAFCIRCIIGAFQNRVVGDL 191

Query: 541 KRPVVNKSTVHHPRSRNIHWKTA 609
           +   VN+S V +  S+++ WK+A
Sbjct: 192 RHQAVNESEVDYHGSKSVRWKSA 214


>ref|XP_002327292.1| predicted protein [Populus trichocarpa] gi|222835662|gb|EEE74097.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  126 bits (316), Expect = 3e-27
 Identities = 71/189 (37%), Positives = 100/189 (52%)
 Frame = +1

Query: 43  KKHFQVLTEKWKVGVQEHWKDQQCSKELLVHVVKGGETLTSISRLYGMSVHSIAAVNEKL 222
           KKHF VL E+W+  +Q+  K Q  +   L+HVVK GETLTSIS+ YG+S++S+AA N+ +
Sbjct: 39  KKHFTVLAERWRFHIQDISKGQSSTNPYLLHVVKEGETLTSISKQYGVSIYSVAAANKNI 98

Query: 223 FDINLVLEGQRLNIPSSGVSNTNKDSMWRIRLYCIKARDRYQHSLTXXXXXXXXXXXXXX 402
            D++LV EGQ LNIP++  + T    + +         +R Q+ +               
Sbjct: 99  LDVDLVFEGQLLNIPAAAPAGTQVYQIKKCESPSFDQLERLQNFM------KIMDGVLNQ 152

Query: 403 XXFTVLYPRNLLPVRTTGYILVVVPLIAFCIGCIINVFHHRVGEYLKRPVVNKSTVHHPR 582
             F  +    L   + TGY LV+VP +AFCI CII  FH R    L     N+S  HH  
Sbjct: 153 KPFITVTTLRLPHAKATGYFLVLVPALAFCIRCIIGAFHTRARRNLGCQASNESRRHHDV 212

Query: 583 SRNIHWKTA 609
             +  WK A
Sbjct: 213 PESKRWKHA 221


>ref|XP_002278178.2| PREDICTED: uncharacterized protein LOC100241456 [Vitis vinifera]
          Length = 168

 Score =  111 bits (277), Expect = 1e-22
 Identities = 59/119 (49%), Positives = 78/119 (65%)
 Frame = +1

Query: 1   RFFLDSLEHNKNLYKKHFQVLTEKWKVGVQEHWKDQQCSKELLVHVVKGGETLTSISRLY 180
           RF LDS    +  +KKHF++LTEKW+  +QE  K Q  +K   VH+VK GETL+SIS+ Y
Sbjct: 17  RFCLDSWISKQRSFKKHFRMLTEKWRFQIQEISKGQHSTKHNSVHMVKEGETLSSISKQY 76

Query: 181 GMSVHSIAAVNEKLFDINLVLEGQRLNIPSSGVSNTNKDSMWRIRLYCIKARDRYQHSL 357
           G+S++SIAA N+ + DI+LV  GQ LNIPSS V  T K    + +L       R+QHSL
Sbjct: 77  GVSIYSIAAANKNIEDIDLVFCGQHLNIPSSAVGETQKFQTEKSKLSSFDTLKRHQHSL 135


>ref|XP_002526401.1| conserved hypothetical protein [Ricinus communis]
           gi|223534263|gb|EEF35977.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 259

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 8/206 (3%)
 Frame = +1

Query: 16  SLEHNKNLYKKHFQVLTEKWKVGVQE------HWKDQQCSKELLVHVVKG--GETLTSIS 171
           S  H +  +KKHFQ L E W+  + +      H+  +  S            GE L SIS
Sbjct: 12  SFPHCETSFKKHFQGLAESWRFHLLKISKLKGHFGQRFYSNGSFTSESFSCRGEKLNSIS 71

Query: 172 RLYGMSVHSIAAVNEKLFDINLVLEGQRLNIPSSGVSNTNKDSMWRIRLYCIKARDRYQH 351
           R YG S H I   N+ + D++ + +GQ  NIP+   ++     +++I+   I  +  +  
Sbjct: 72  RHYGESFHPIVDSNKNISDVDFLCKGQLPNIPAFVPADCQ---LYQIK---ISGKSSFYQ 125

Query: 352 SLTXXXXXXXXXXXXXXXXFTVLYPRNLLPVRTTGYILVVVPLIAFCIGCIINVFHHRVG 531
                              F +L   +L   ++TGY LV+VPLIAFCI CI+  FH RV 
Sbjct: 126 KERPRSSMAILDGFLKQKPFILLSSHSLPHAKSTGYFLVLVPLIAFCITCILGAFHTRVP 185

Query: 532 EYLKRPVVNKSTVHHPRSRNIHWKTA 609
             + R  V+KS        ++ WK A
Sbjct: 186 SDMGRRAVDKS--RKKGHNSMRWKNA 209


>ref|XP_002872481.1| hypothetical protein ARALYDRAFT_327172 [Arabidopsis lyrata subsp.
           lyrata] gi|297318318|gb|EFH48740.1| hypothetical protein
           ARALYDRAFT_327172 [Arabidopsis lyrata subsp. lyrata]
          Length = 249

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 3/191 (1%)
 Frame = +1

Query: 46  KHFQVLTEKWKVGVQEHWKDQQCSKELLVHVVKGGETLTSISRLYGMSVHSIA--AVNEK 219
           K F+ ++E+WK+  Q+  + +Q ++  L    K  E+L  I + YG+SV +      + +
Sbjct: 27  KRFRRVSERWKIRAQQMLEKEQRTQHELARFAKRSESLRRILKQYGVSVETPEENKTSSR 86

Query: 220 LFDINLVLEGQRLNIPSSGVSNTNKDSMWRIRLYCIKARDRYQHSLTXXXXXXXXXXXXX 399
           L D+N   E    ++PSS + +   ++     L  ++ +++Y  +++             
Sbjct: 87  LDDLNFE-EKHHDDVPSSVIDDAKMNT--TEELPDLRQQEKYSETVSTADNLSG------ 137

Query: 400 XXXFTVLYPRNLLPVRTTGYILV-VVPLIAFCIGCIINVFHHRVGEYLKRPVVNKSTVHH 576
                  +  + LP   TG +   ++P++ FCI CII   H  +    ++P    S  HH
Sbjct: 138 -------HDHHNLPHLNTGVLFTSLLPVLGFCIVCIIGTLHTIIS---RKP----SQDHH 183

Query: 577 PRSRNIHWKTA 609
             S+   W+TA
Sbjct: 184 HGSKTTRWRTA 194


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