BLASTX nr result

ID: Coptis21_contig00022170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022170
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACM45716.1| class IV chitinase [Pyrus pyrifolia]                   197   6e-49
ref|XP_002326040.1| predicted protein [Populus trichocarpa] gi|2...   194   5e-48
ref|XP_002274758.1| PREDICTED: endochitinase PR4 [Vitis vinifera]     192   2e-47
emb|CBI24650.3| unnamed protein product [Vitis vinifera]              191   5e-47
ref|XP_002274537.1| PREDICTED: endochitinase PR4 [Vitis vinifera]     191   5e-47

>gb|ACM45716.1| class IV chitinase [Pyrus pyrifolia]
          Length = 272

 Score =  197 bits (502), Expect = 6e-49
 Identities = 92/108 (85%), Positives = 97/108 (89%)
 Frame = +2

Query: 2   TNDVTVADIVTPEFFNGIINQAGADCAGKNFYSRDRFLEALNSYPKFGRVGTQDDSKREI 181
           TNDV VADIVTPEFFNGII+QA A CAGKNFYSR  FLEALNSY +FGR+G+ DDSKREI
Sbjct: 66  TNDVVVADIVTPEFFNGIIDQADASCAGKNFYSRATFLEALNSYNQFGRIGSVDDSKREI 125

Query: 182 AAFFAHVTQETGHFCYIEEIDGASKDYCDETNSQYPCVANKGYYGRGP 325
           AAFFAHVT ETGHFCYIEEIDGASKDYCDE N+QYPC  NKGYYGRGP
Sbjct: 126 AAFFAHVTHETGHFCYIEEIDGASKDYCDENNTQYPCNPNKGYYGRGP 173


>ref|XP_002326040.1| predicted protein [Populus trichocarpa] gi|222862915|gb|EEF00422.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  194 bits (494), Expect = 5e-48
 Identities = 87/107 (81%), Positives = 97/107 (90%)
 Frame = +2

Query: 5   NDVTVADIVTPEFFNGIINQAGADCAGKNFYSRDRFLEALNSYPKFGRVGTQDDSKREIA 184
           NDVTVAD+VTPEFFNGIINQAG DCAGK+FY+RD FL ALNSY +FG++G+ DDSKREIA
Sbjct: 65  NDVTVADVVTPEFFNGIINQAGGDCAGKSFYTRDAFLSALNSYSQFGKIGSNDDSKREIA 124

Query: 185 AFFAHVTQETGHFCYIEEIDGASKDYCDETNSQYPCVANKGYYGRGP 325
           AFFAHVT ETGHFCYIEEI+GAS DYCDETN+QYPC  NK Y+GRGP
Sbjct: 125 AFFAHVTHETGHFCYIEEINGASHDYCDETNTQYPCNPNKNYFGRGP 171


>ref|XP_002274758.1| PREDICTED: endochitinase PR4 [Vitis vinifera]
          Length = 274

 Score =  192 bits (489), Expect = 2e-47
 Identities = 88/108 (81%), Positives = 100/108 (92%)
 Frame = +2

Query: 2   TNDVTVADIVTPEFFNGIINQAGADCAGKNFYSRDRFLEALNSYPKFGRVGTQDDSKREI 181
           TN+V+VADIVT EFFNGII+QA A C GKNFYSR RFLEALNS+ +FGRVG+++DSKREI
Sbjct: 68  TNNVSVADIVTQEFFNGIIDQADASCEGKNFYSRARFLEALNSFSQFGRVGSEEDSKREI 127

Query: 182 AAFFAHVTQETGHFCYIEEIDGASKDYCDETNSQYPCVANKGYYGRGP 325
           AAFFAHVT ETGHFCYIEEI+G+S+DYCDETN+QYPCVA KGYYGRGP
Sbjct: 128 AAFFAHVTHETGHFCYIEEINGSSRDYCDETNTQYPCVAGKGYYGRGP 175


>emb|CBI24650.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  191 bits (485), Expect = 5e-47
 Identities = 87/108 (80%), Positives = 100/108 (92%)
 Frame = +2

Query: 2   TNDVTVADIVTPEFFNGIINQAGADCAGKNFYSRDRFLEALNSYPKFGRVGTQDDSKREI 181
           TN+V+VADIVT +FFNGII+QA A C GKNFYSR RFLEALNS+ +FGRVG+++DSKREI
Sbjct: 45  TNNVSVADIVTQKFFNGIIDQADASCEGKNFYSRARFLEALNSFSQFGRVGSEEDSKREI 104

Query: 182 AAFFAHVTQETGHFCYIEEIDGASKDYCDETNSQYPCVANKGYYGRGP 325
           AAFFAHVT ETGHFCYIEEI+G+S+DYCDETN+QYPCVA KGYYGRGP
Sbjct: 105 AAFFAHVTHETGHFCYIEEINGSSRDYCDETNTQYPCVAGKGYYGRGP 152


>ref|XP_002274537.1| PREDICTED: endochitinase PR4 [Vitis vinifera]
          Length = 274

 Score =  191 bits (485), Expect = 5e-47
 Identities = 87/108 (80%), Positives = 100/108 (92%)
 Frame = +2

Query: 2   TNDVTVADIVTPEFFNGIINQAGADCAGKNFYSRDRFLEALNSYPKFGRVGTQDDSKREI 181
           TN+V+VADIVT +FFNGII+QA A C GKNFYSR RFLEALNS+ +FGRVG+++DSKREI
Sbjct: 68  TNNVSVADIVTQKFFNGIIDQADASCEGKNFYSRARFLEALNSFSQFGRVGSEEDSKREI 127

Query: 182 AAFFAHVTQETGHFCYIEEIDGASKDYCDETNSQYPCVANKGYYGRGP 325
           AAFFAHVT ETGHFCYIEEI+G+S+DYCDETN+QYPCVA KGYYGRGP
Sbjct: 128 AAFFAHVTHETGHFCYIEEINGSSRDYCDETNTQYPCVAGKGYYGRGP 175


Top