BLASTX nr result

ID: Coptis21_contig00022160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022160
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269338.1| PREDICTED: CBS domain-containing protein CBS...    93   2e-19
emb|CBI25846.3| unnamed protein product [Vitis vinifera]               93   2e-19
ref|XP_002329767.1| predicted protein [Populus trichocarpa] gi|2...    80   3e-17
ref|XP_002329144.1| predicted protein [Populus trichocarpa] gi|2...    88   5e-17
ref|XP_002305808.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-17

>ref|XP_002269338.1| PREDICTED: CBS domain-containing protein CBSX5 [Vitis vinifera]
          Length = 384

 Score = 93.2 bits (230), Expect(2) = 2e-19
 Identities = 44/81 (54%), Positives = 57/81 (70%)
 Frame = +1

Query: 82  MAVTLSSHEVSDLCLGKPAXXXXXXXXXXIEALNALKTTGETYLSVWDCTHSCQKIQSFV 261
           MAV+L  HEVSDLCLGKPA           +AL ALK +G+ YLSVW C H+ +  +S +
Sbjct: 1   MAVSLLGHEVSDLCLGKPALRSLPVSATVADALAALKRSGDAYLSVWSCDHTSKINKSHL 60

Query: 262 ETECKCVGKISMVDIVCFLCK 324
           E +C+C+GKI MVD+VCFLC+
Sbjct: 61  E-DCRCIGKICMVDVVCFLCR 80



 Score = 27.7 bits (60), Expect(2) = 2e-19
 Identities = 12/33 (36%), Positives = 23/33 (69%)
 Frame = +2

Query: 437 EEDESNLSSFLQLPVSVIVSKGDSIIRHVEPHS 535
           E++ S  S  LQ P+S+++ K   ++RH++P+S
Sbjct: 81  EDNLSCPSDALQSPLSLLLPKVPGLVRHLKPNS 113


>emb|CBI25846.3| unnamed protein product [Vitis vinifera]
          Length = 131

 Score = 93.2 bits (230), Expect(2) = 2e-19
 Identities = 44/81 (54%), Positives = 57/81 (70%)
 Frame = +1

Query: 82  MAVTLSSHEVSDLCLGKPAXXXXXXXXXXIEALNALKTTGETYLSVWDCTHSCQKIQSFV 261
           MAV+L  HEVSDLCLGKPA           +AL ALK +G+ YLSVW C H+ +  +S +
Sbjct: 1   MAVSLLGHEVSDLCLGKPALRSLPVSATVADALAALKRSGDAYLSVWSCDHTSKINKSHL 60

Query: 262 ETECKCVGKISMVDIVCFLCK 324
           E +C+C+GKI MVD+VCFLC+
Sbjct: 61  E-DCRCIGKICMVDVVCFLCR 80



 Score = 27.7 bits (60), Expect(2) = 2e-19
 Identities = 12/33 (36%), Positives = 23/33 (69%)
 Frame = +2

Query: 437 EEDESNLSSFLQLPVSVIVSKGDSIIRHVEPHS 535
           E++ S  S  LQ P+S+++ K   ++RH++P+S
Sbjct: 81  EDNLSCPSDALQSPLSLLLPKVPGLVRHLKPNS 113


>ref|XP_002329767.1| predicted protein [Populus trichocarpa] gi|222870829|gb|EEF07960.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 80.1 bits (196), Expect(2) = 3e-17
 Identities = 43/84 (51%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
 Frame = +1

Query: 82  MAVTLSSHEVSDLCLGKPAXXXXXXXXXXIEALNALKTTGETYLSVWDCTH-----SCQK 246
           MAV++ S+EVSDLCLGKPA           +AL+ALK +G+ +LSVW C H     S   
Sbjct: 1   MAVSILSNEVSDLCLGKPALSSLSASATVGDALSALKRSGDLFLSVWSCDHLHHCNSPIS 60

Query: 247 IQSFVETECKCVGKISMVDIVCFL 318
           IQ   E ECKCVGK+ +VD++CFL
Sbjct: 61  IQVDFE-ECKCVGKVCLVDVICFL 83



 Score = 33.1 bits (74), Expect(2) = 3e-17
 Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 434 VEEDESNLSSFLQLPVSVIV-SKGDSIIRHVEPHS 535
           VEE+  N    LQ PVSV++ SK   ++RH+EPH+
Sbjct: 85  VEENLKNPGKALQEPVSVLLNSKVPGLVRHLEPHA 119


>ref|XP_002329144.1| predicted protein [Populus trichocarpa] gi|222869813|gb|EEF06944.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score = 88.2 bits (217), Expect(2) = 5e-17
 Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
 Frame = +1

Query: 82  MAVTLSSHEVSDLCLGKPAXXXXXXXXXXIEALNALKTTGETYLSVWDCTHSCQKIQSFV 261
           MAV+L +HEVSDLCLGKPA           EAL ALK + + ++SVW+C H+ +    + 
Sbjct: 1   MAVSLLAHEVSDLCLGKPALRSLALTTTIAEALFALKNSDDNFISVWNCDHAAKTNNDYK 60

Query: 262 ET---------ECKCVGKISMVDIVCFLCK 324
                      ECKCVGK+SMVD+VC+LCK
Sbjct: 61  GNCEEEGCDVCECKCVGKVSMVDVVCYLCK 90



 Score = 24.3 bits (51), Expect(2) = 5e-17
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +2

Query: 440 EDESNL--SSFLQLPVSVIVSKGDSIIRHVEPHS 535
           +DE+ L  S  L+ PVSV++ +   ++ HVEP S
Sbjct: 90  KDENLLFPSDALKAPVSVLLPEIPGMVVHVEPTS 123


>ref|XP_002305808.1| predicted protein [Populus trichocarpa] gi|222848772|gb|EEE86319.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 81.6 bits (200), Expect(2) = 5e-17
 Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
 Frame = +1

Query: 82  MAVTLSSHEVSDLCLGKPAXXXXXXXXXXIEALNALKTTGETYLSVWDCT--HSCQKIQS 255
           MA ++ SHEVSDLCLGKPA           EAL+ALK  G+ +LSVW C   H C   +S
Sbjct: 1   MAASILSHEVSDLCLGKPALSSLSVSATVGEALSALKRFGDLFLSVWSCDQHHRCNSPRS 60

Query: 256 FVE--TECKCVGKISMVDIVCFLCK 324
                 ECKC+GK+ + D++CFL K
Sbjct: 61  IKVDFAECKCIGKVCLADVICFLSK 85



 Score = 30.8 bits (68), Expect(2) = 5e-17
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +2

Query: 437 EEDESNLSSFLQLPVSVIV-SKGDSIIRHVEPHS 535
           EE+  N    LQ PVS+++ SK   ++RH+EPH+
Sbjct: 86  EENLKNPGKALQEPVSLLLNSKVSGLVRHLEPHA 119


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