BLASTX nr result

ID: Coptis21_contig00022159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022159
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285824.1| PREDICTED: protein grpE [Vitis vinifera] gi|...   290   5e-76
ref|XP_002301021.1| predicted protein [Populus trichocarpa] gi|2...   259   1e-66
ref|XP_002513845.1| Protein grpE, putative [Ricinus communis] gi...   258   3e-66
ref|XP_004150939.1| PREDICTED: protein GrpE-like [Cucumis sativus]    247   5e-63
ref|XP_004168166.1| PREDICTED: LOW QUALITY PROTEIN: protein GrpE...   246   7e-63

>ref|XP_002285824.1| PREDICTED: protein grpE [Vitis vinifera] gi|302141888|emb|CBI19091.3|
            unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  290 bits (742), Expect = 5e-76
 Identities = 150/251 (59%), Positives = 189/251 (75%), Gaps = 8/251 (3%)
 Frame = -2

Query: 1123 RPCLKPFVRTQDSEPEVDEK--------KTLKGKVSERPSSDLKNLIDAYKEAILNGDEK 968
            R   KPF+  QDS P  + +        KT K +  ++P S LK+LI AYK+A+L+GDEK
Sbjct: 43   RRSFKPFLALQDSTPYTNNEEEGSRYDVKTSKSEADQKPLSVLKSLIKAYKDAVLDGDEK 102

Query: 967  TLLEIESFFRKLEDEKNELVEKVGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLTS 788
             + EIE+    +E EK EL +KV AL  +I S KE +IR QADF+NFRK+ EK++L + +
Sbjct: 103  AVSEIEAMIDTIESEKAELAQKVSALSAEITSGKEKYIRLQADFDNFRKRSEKERLTVRT 162

Query: 787  NTQKDVIESLLPVVDNFEKAKQHIIPETEKGQKINTSYQSIYKQFVEILRSLRVSVVQTV 608
            + Q +V+ESLLP++DNFE+AKQ I PETEK +KI+TSYQ IYKQFVEI+RS  V+ V TV
Sbjct: 163  DAQGEVVESLLPMIDNFERAKQQIKPETEKEKKIDTSYQGIYKQFVEIMRSCHVAAVATV 222

Query: 607  GKPFDPLLHEAIAREESQQFKEGVIIKETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIPT 428
            GKPFDP LHEAIAREESQ+FKEG+II+E RRGFLLGDR+LRPA+VKVSTG G KKT    
Sbjct: 223  GKPFDPALHEAIAREESQEFKEGIIIQEIRRGFLLGDRLLRPAMVKVSTGPGRKKTSAVA 282

Query: 427  EESEGQPATAA 395
            ++S GQPATAA
Sbjct: 283  DKSTGQPATAA 293


>ref|XP_002301021.1| predicted protein [Populus trichocarpa] gi|222842747|gb|EEE80294.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  259 bits (661), Expect = 1e-66
 Identities = 132/252 (52%), Positives = 187/252 (74%), Gaps = 1/252 (0%)
 Frame = -2

Query: 1147 PFLCSKSNRPCLKPFVRTQDSEPEVDEKKTLKG-KVSERPSSDLKNLIDAYKEAILNGDE 971
            P   +   R  LK ++  +DS P  + K+     +  ++    LKNL+  Y++AI  GDE
Sbjct: 19   PIPINNIKRRSLKTYLAPEDSAPTTNGKEENNEIQEGQKRGPSLKNLMKIYRQAIFYGDE 78

Query: 970  KTLLEIESFFRKLEDEKNELVEKVGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLT 791
            KT+L+IE+    +E E +E ++KV +L  +I S KE +IR QADF+NFRK+ +K+++ + 
Sbjct: 79   KTILDIEAKAATIEKENHEFLQKVSSLSAEITSGKEKYIRLQADFDNFRKRSDKERVNIR 138

Query: 790  SNTQKDVIESLLPVVDNFEKAKQHIIPETEKGQKINTSYQSIYKQFVEILRSLRVSVVQT 611
            S+ Q +VIESLLP+VD+FE+AKQ I PETEK +KI++SYQ IYKQ V+I+R+L+V+ V T
Sbjct: 139  SDAQGEVIESLLPMVDSFERAKQQIQPETEKEKKIDSSYQGIYKQLVDIMRNLQVAAVPT 198

Query: 610  VGKPFDPLLHEAIAREESQQFKEGVIIKETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIP 431
            VGKPFDP LHEAIAREESQ++KEG+II+E RRGFL+G+R++RPA+VKVS+G G+KK+ + 
Sbjct: 199  VGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLIGNRLIRPAMVKVSSGPGNKKSSVG 258

Query: 430  TEESEGQPATAA 395
            TE    QPATAA
Sbjct: 259  TETRAEQPATAA 270


>ref|XP_002513845.1| Protein grpE, putative [Ricinus communis] gi|223546931|gb|EEF48428.1|
            Protein grpE, putative [Ricinus communis]
          Length = 315

 Score =  258 bits (658), Expect = 3e-66
 Identities = 140/251 (55%), Positives = 181/251 (72%), Gaps = 8/251 (3%)
 Frame = -2

Query: 1123 RPCLKPFVRTQDSEPEVD--------EKKTLKGKVSERPSSDLKNLIDAYKEAILNGDEK 968
            R   K ++ T DS P+ +        +KK L+ +   +    L  LI+ YKEAIL GDE+
Sbjct: 64   RRSFKAYLATDDSSPDTNNEEGSDQNDKKALQKQTDAKHLPSLTKLINIYKEAILLGDER 123

Query: 967  TLLEIESFFRKLEDEKNELVEKVGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLTS 788
            T+ +IE+  + +E+   ELV+KV  L  +I S KE +IR QADF+NFRK+ EK++  + S
Sbjct: 124  TVTDIEARIKIIENTNYELVQKVSDLSTEITSGKEKYIRLQADFDNFRKRSEKERHTIRS 183

Query: 787  NTQKDVIESLLPVVDNFEKAKQHIIPETEKGQKINTSYQSIYKQFVEILRSLRVSVVQTV 608
            + Q +VIESLLP+VD+FE+AKQ I PETE  +KI+TSYQ IYKQFVEI+RSL+V+VV TV
Sbjct: 184  DAQGEVIESLLPMVDSFERAKQQIKPETEMEKKIDTSYQGIYKQFVEIMRSLQVAVVATV 243

Query: 607  GKPFDPLLHEAIAREESQQFKEGVIIKETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIPT 428
            GKPFDP LHEAIAREESQ++KEG+II+E RRGFLLG R+LRPA+VKVS G G KK  +  
Sbjct: 244  GKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLLGGRLLRPAMVKVSAGPGRKKAPVGA 303

Query: 427  EESEGQPATAA 395
            E    QPATAA
Sbjct: 304  E----QPATAA 310


>ref|XP_004150939.1| PREDICTED: protein GrpE-like [Cucumis sativus]
          Length = 316

 Score =  247 bits (630), Expect = 5e-63
 Identities = 140/302 (46%), Positives = 196/302 (64%), Gaps = 7/302 (2%)
 Frame = -2

Query: 1276 FTSSSAMAVDLSVARLFLTTPAIYNTQLSGGLKTSFFPRIRQKPFLCSKSNRPCLKPFVR 1097
            F SSS+  +D S +      P ++N +    L    F       F  + S+ P  +PF  
Sbjct: 20   FLSSSSKTLDSS-SSFHQPLPLLHNPRHRSRLYDPLFS------FSPTSSSSPLTRPFAS 72

Query: 1096 TQDSEPEV-------DEKKTLKGKVSERPSSDLKNLIDAYKEAILNGDEKTLLEIESFFR 938
               +   V       D+ K ++    +   S L+ LI+ Y+EA L+GD+KT+ E+E+  +
Sbjct: 73   CLSAHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARIK 132

Query: 937  KLEDEKNELVEKVGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLTSNTQKDVIESL 758
             +  EK+EL  K+  +  ++ S KE +IR QADF+NFRK+ EK+Q  + +N QK+V+ESL
Sbjct: 133  IIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESL 192

Query: 757  LPVVDNFEKAKQHIIPETEKGQKINTSYQSIYKQFVEILRSLRVSVVQTVGKPFDPLLHE 578
            LP++D+F+KA+Q I+P+T+K +KI+ SYQ IYKQFVE LRS RVS V TVG+PFDP LHE
Sbjct: 193  LPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHE 252

Query: 577  AIAREESQQFKEGVIIKETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIPTEESEGQPATA 398
            A+AREESQ+ KEG+II+E RRGFLLG+R+LRPA VKVS G G K +   T + E QPA A
Sbjct: 253  AVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSS--RTVDGEQQPAAA 310

Query: 397  AV 392
            AV
Sbjct: 311  AV 312


>ref|XP_004168166.1| PREDICTED: LOW QUALITY PROTEIN: protein GrpE-like [Cucumis sativus]
          Length = 316

 Score =  246 bits (629), Expect = 7e-63
 Identities = 140/302 (46%), Positives = 196/302 (64%), Gaps = 7/302 (2%)
 Frame = -2

Query: 1276 FTSSSAMAVDLSVARLFLTTPAIYNTQLSGGLKTSFFPRIRQKPFLCSKSNRPCLKPFVR 1097
            F SSS+  +D S +      P ++N +    L    F       F  + S+ P  +PF  
Sbjct: 20   FLSSSSKTLDSS-SSFHQPLPLLHNPRHRSRLYDPLFS------FSPTSSSSPLTRPFAS 72

Query: 1096 TQDSEPEV-------DEKKTLKGKVSERPSSDLKNLIDAYKEAILNGDEKTLLEIESFFR 938
               +   V       D+ K ++    +   S L+ LI+ Y+EA L+GD+KT+ E+E+  +
Sbjct: 73   CLSAHNSVANVNNEEDDGKAMEKDGYKFDGSGLQTLIEVYREAFLDGDQKTVSEVEARXK 132

Query: 937  KLEDEKNELVEKVGALLPDIASQKENFIRTQADFENFRKQFEKDQLRLTSNTQKDVIESL 758
             +  EK+EL  K+  +  ++ S KE +IR QADF+NFRK+ EK+Q  + +N QK+V+ESL
Sbjct: 133  IIGREKDELSRKLMNISTEMTSGKEKYIRLQADFDNFRKRSEKEQHTVKNNAQKEVLESL 192

Query: 757  LPVVDNFEKAKQHIIPETEKGQKINTSYQSIYKQFVEILRSLRVSVVQTVGKPFDPLLHE 578
            LP++D+F+KA+Q I+P+T+K +KI+ SYQ IYKQFVE LRS RVS V TVG+PFDP LHE
Sbjct: 193  LPMIDHFDKARQQIVPQTDKEKKIDISYQGIYKQFVETLRSWRVSAVATVGRPFDPSLHE 252

Query: 577  AIAREESQQFKEGVIIKETRRGFLLGDRVLRPAVVKVSTGSGHKKTLIPTEESEGQPATA 398
            A+AREESQ+ KEG+II+E RRGFLLG+R+LRPA VKVS G G K +   T + E QPA A
Sbjct: 253  AVAREESQEIKEGIIIQELRRGFLLGERLLRPARVKVSKGPGRKSS--RTVDGEQQPAAA 310

Query: 397  AV 392
            AV
Sbjct: 311  AV 312


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