BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022149
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein ...   138   1e-30
ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arab...   124   2e-26
ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein ...   120   4e-25
ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycin...   120   4e-25
ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein ...   115   2e-23

>ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|296084274|emb|CBI24662.3| unnamed
           protein product [Vitis vinifera]
          Length = 108

 Score =  138 bits (348), Expect = 1e-30
 Identities = 65/91 (71%), Positives = 78/91 (85%), Gaps = 2/91 (2%)
 Frame = +1

Query: 106 RWVTGRGSCSKLFVG--GLSYDTNESVLKDAFGRHGELIEVKVICDRMSGKSKGFGFVQF 279
           RW+  RGSC KLF+G  GLSYDTNE++LKDAFG++GE+IEVKVICD +SGKSKG+GFVQF
Sbjct: 18  RWLVSRGSCRKLFIGDAGLSYDTNETILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQF 77

Query: 280 TTESSASKALQEMDGQLLDGRNIRIDYAKKG 372
           T++  A  AL+EMDGQ LDGRNIR+ YA KG
Sbjct: 78  TSDDDAHIALKEMDGQSLDGRNIRVTYAHKG 108


>ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arabidopsis lyrata subsp.
           lyrata] gi|297308404|gb|EFH38976.1| hypothetical protein
           ARALYDRAFT_359421 [Arabidopsis lyrata subsp. lyrata]
          Length = 113

 Score =  124 bits (312), Expect = 2e-26
 Identities = 59/87 (67%), Positives = 74/87 (85%)
 Frame = +1

Query: 106 RWVTGRGSCSKLFVGGLSYDTNESVLKDAFGRHGELIEVKVICDRMSGKSKGFGFVQFTT 285
           R++T RGSCSKLFVGGLSYDTNE VLK+ F ++GE+IEVKVICD  SGKSKG+GFV F +
Sbjct: 17  RYLTIRGSCSKLFVGGLSYDTNEPVLKNEFEKYGEVIEVKVICDHKSGKSKGYGFVLFDS 76

Query: 286 ESSASKALQEMDGQLLDGRNIRIDYAK 366
           E +A+ AL  M+ QLL+GRNIR++YA+
Sbjct: 77  EEAAASALASMNNQLLEGRNIRVEYAQ 103


>ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Brachypodium distachyon]
          Length = 109

 Score =  120 bits (301), Expect = 4e-25
 Identities = 58/105 (55%), Positives = 78/105 (74%), Gaps = 4/105 (3%)
 Frame = +1

Query: 70  GVRSITKAVLPARWVTGRG----SCSKLFVGGLSYDTNESVLKDAFGRHGELIEVKVICD 237
           G +++  + +P R +  R     SCSKLFVGGLSYDTNE  LKDAF +HG + EVKVIC 
Sbjct: 5   GGKALASSTIPLRNLLNRSANFSSCSKLFVGGLSYDTNEIALKDAFSQHGTVTEVKVICH 64

Query: 238 RMSGKSKGFGFVQFTTESSASKALQEMDGQLLDGRNIRIDYAKKG 372
            ++G+SKG+GFV+F++ES A+ AL++M  +LLDGRNIR+ YA  G
Sbjct: 65  PVTGRSKGYGFVKFSSESEAAAALEKMSNELLDGRNIRVHYANSG 109


>ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
           gi|255628821|gb|ACU14755.1| unknown [Glycine max]
          Length = 146

 Score =  120 bits (301), Expect = 4e-25
 Identities = 54/82 (65%), Positives = 72/82 (87%)
 Frame = +1

Query: 127 SCSKLFVGGLSYDTNESVLKDAFGRHGELIEVKVICDRMSGKSKGFGFVQFTTESSASKA 306
           S +KLFV GLSYDTNE +L+DAFG+HGE+IEVKVICD ++GKS+G+GFV+F +E++A+ A
Sbjct: 56  SSTKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAAA 115

Query: 307 LQEMDGQLLDGRNIRIDYAKKG 372
            +EM+GQ+LDGR IR+ YA KG
Sbjct: 116 RKEMNGQILDGRRIRVSYAHKG 137


>ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 146

 Score =  115 bits (287), Expect = 2e-23
 Identities = 54/82 (65%), Positives = 69/82 (84%)
 Frame = +1

Query: 127 SCSKLFVGGLSYDTNESVLKDAFGRHGELIEVKVICDRMSGKSKGFGFVQFTTESSASKA 306
           S  KLFV GLSYDTNE VL+DAFG+HGE+IEVKVICD ++GKS+G+GFV+F +E+ A+  
Sbjct: 56  SSIKLFVTGLSYDTNEPVLRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFLSETIAAAT 115

Query: 307 LQEMDGQLLDGRNIRIDYAKKG 372
            +EM+GQ+LDGR IR+ YA KG
Sbjct: 116 HKEMNGQILDGRCIRVSYAHKG 137