BLASTX nr result

ID: Coptis21_contig00022125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022125
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|2...   136   5e-30
ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot...   135   6e-30
emb|CBI39598.3| unnamed protein product [Vitis vinifera]              135   6e-30
ref|XP_002330255.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
ref|NP_001242466.1| uncharacterized protein LOC100784528 [Glycin...   130   3e-28

>ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|222857325|gb|EEE94872.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  136 bits (342), Expect = 5e-30
 Identities = 59/103 (57%), Positives = 84/103 (81%)
 Frame = -1

Query: 700 LQARLLKAISPPSLPHLFKNSLSAALLIDIIKCIATFFREETELAVRYLDNLAKVPRFDL 521
           LQA LLK ++P +LP +FKN+LS  +LIDIIKC+++FF ++ +LAV+YL+NL +VPRFD+
Sbjct: 368 LQAHLLKVVTPSALPQIFKNALSVTILIDIIKCVSSFFIDDMDLAVKYLENLTEVPRFDI 427

Query: 520 LIMCLSATDKSDLHRMWEENFLSNALPVEFVETLGKLRMKYCP 392
           LIMCL +TDK+DL +MW+E F S A P+++ E L K+R +YCP
Sbjct: 428 LIMCLPSTDKADLLKMWDEVFCSEATPIKYAEILDKMRSRYCP 470


>ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3-like [Vitis
           vinifera]
          Length = 474

 Score =  135 bits (341), Expect = 6e-30
 Identities = 64/102 (62%), Positives = 83/102 (81%)
 Frame = -1

Query: 700 LQARLLKAISPPSLPHLFKNSLSAALLIDIIKCIATFFREETELAVRYLDNLAKVPRFDL 521
           LQA  LKAISP +LP +FKN+LSA +LIDIIKCIATFF  E +LAV++LDNL K+ RFD+
Sbjct: 370 LQASYLKAISPNALPQIFKNALSAPILIDIIKCIATFFVTEMDLAVKFLDNLTKISRFDM 429

Query: 520 LIMCLSATDKSDLHRMWEENFLSNALPVEFVETLGKLRMKYC 395
           +IMCLS+TDK+DL ++W+E F + A P  + +TLGKLR +YC
Sbjct: 430 IIMCLSSTDKTDLLKIWDEVFCNKATPSGYADTLGKLRPRYC 471


>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
          Length = 1097

 Score =  135 bits (341), Expect = 6e-30
 Identities = 64/102 (62%), Positives = 83/102 (81%)
 Frame = -1

Query: 700  LQARLLKAISPPSLPHLFKNSLSAALLIDIIKCIATFFREETELAVRYLDNLAKVPRFDL 521
            LQA  LKAISP +LP +FKN+LSA +LIDIIKCIATFF  E +LAV++LDNL K+ RFD+
Sbjct: 993  LQASYLKAISPNALPQIFKNALSAPILIDIIKCIATFFVTEMDLAVKFLDNLTKISRFDM 1052

Query: 520  LIMCLSATDKSDLHRMWEENFLSNALPVEFVETLGKLRMKYC 395
            +IMCLS+TDK+DL ++W+E F + A P  + +TLGKLR +YC
Sbjct: 1053 IIMCLSSTDKTDLLKIWDEVFCNKATPSGYADTLGKLRPRYC 1094


>ref|XP_002330255.1| predicted protein [Populus trichocarpa] gi|222871711|gb|EEF08842.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  134 bits (337), Expect = 2e-29
 Identities = 62/103 (60%), Positives = 80/103 (77%)
 Frame = -1

Query: 700 LQARLLKAISPPSLPHLFKNSLSAALLIDIIKCIATFFREETELAVRYLDNLAKVPRFDL 521
           LQA LLK  SP +LP +FKN+LS  +LIDIIKC+A+FF ++ + AV+YL+NL KVPRFD+
Sbjct: 330 LQAHLLKVTSPSALPQIFKNALSVPILIDIIKCVASFFIDDMDFAVKYLENLTKVPRFDM 389

Query: 520 LIMCLSATDKSDLHRMWEENFLSNALPVEFVETLGKLRMKYCP 392
           LIMCLS+TD SDL +MW+  F S + P+E+ E L  LR KYCP
Sbjct: 390 LIMCLSSTDTSDLLKMWDGVFCSASTPIEYAEILDNLRSKYCP 432


>ref|NP_001242466.1| uncharacterized protein LOC100784528 [Glycine max]
           gi|255641877|gb|ACU21207.1| unknown [Glycine max]
          Length = 454

 Score =  130 bits (327), Expect = 3e-28
 Identities = 59/101 (58%), Positives = 82/101 (81%)
 Frame = -1

Query: 700 LQARLLKAISPPSLPHLFKNSLSAALLIDIIKCIATFFREETELAVRYLDNLAKVPRFDL 521
           LQARLLKAISP  LP +FKN+LS+A+LI+IIKC+A+FF E+ +L V YL++L KVPRFD+
Sbjct: 350 LQARLLKAISPHELPKIFKNALSSAILIEIIKCLASFFTEDMDLVVSYLEHLTKVPRFDV 409

Query: 520 LIMCLSATDKSDLHRMWEENFLSNALPVEFVETLGKLRMKY 398
           ++MCLS+T+K D+ ++W+E F S A P+E+ E L  LR K+
Sbjct: 410 IVMCLSSTNKDDIRKIWDEVFSSEATPIEYAEILDNLRSKF 450


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