BLASTX nr result

ID: Coptis21_contig00022123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022123
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447399.1| hypothetical protein SORBIDRAFT_06g000290 [S...    57   9e-08
emb|CAN69820.1| hypothetical protein VITISV_025709 [Vitis vinifera]    48   2e-07
emb|CAN62820.1| hypothetical protein VITISV_013243 [Vitis vinifera]    51   3e-07
gb|EEC70571.1| hypothetical protein OsI_01753 [Oryza sativa Indi...    49   3e-07
gb|EEE56168.1| hypothetical protein OsJ_05086 [Oryza sativa Japo...    50   4e-07

>ref|XP_002447399.1| hypothetical protein SORBIDRAFT_06g000290 [Sorghum bicolor]
            gi|241938582|gb|EES11727.1| hypothetical protein
            SORBIDRAFT_06g000290 [Sorghum bicolor]
          Length = 968

 Score = 57.0 bits (136), Expect(2) = 9e-08
 Identities = 34/88 (38%), Positives = 46/88 (52%)
 Frame = -2

Query: 647  RFFYWSASQGRTLTADSLIRRGFDVSPTCSMCSSFNESIMHLFLVCPFALQ*CWTIFMQP 468
            +FF+W A  GR  TAD   R G   S  C++C+   E+  HLF  C  A Q  W + +QP
Sbjct: 813  KFFFWLALHGRLWTADRRRRHGLQDSDECNLCAQEAETRAHLFKSCVMARQ-LWQLLLQP 871

Query: 467  NGTAFPRIA*IDNVEECLVAWPRLRSRG 384
             G     +    NVE+C +A   LR+RG
Sbjct: 872  LGL----LPLAPNVEDCSLADWWLRARG 895



 Score = 25.0 bits (53), Expect(2) = 9e-08
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 352 IYVVIWAIWKARNNHLFR 299
           + +V W +WK RN  +FR
Sbjct: 909 VLLVTWFLWKERNARVFR 926


>emb|CAN69820.1| hypothetical protein VITISV_025709 [Vitis vinifera]
          Length = 779

 Score = 48.1 bits (113), Expect(2) = 2e-07
 Identities = 29/97 (29%), Positives = 45/97 (46%)
 Frame = -2

Query: 644 FFYWSASQGRTLTADSLIRRGFDVSPTCSMCSSFNESIMHLFLVCPFALQ*CWTIFMQPN 465
           FF W AS G+ LT + L RRGF ++  C +C S  E++ HL L C    +  W +     
Sbjct: 564 FFAWEASWGKVLTQEQLQRRGFSLANRCFLCLSEEETVDHLLLHC-IKTRVLWNLLFSLF 622

Query: 464 GTAFPRIA*IDNVEECLVAWPRLRSRGFGAKIWRLVP 354
           G ++       +V+  L+ W          K W++ P
Sbjct: 623 GISWTLSC---SVKSTLLGWTGGFVGKRRKKAWQMAP 656



 Score = 32.7 bits (73), Expect(2) = 2e-07
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -3

Query: 343 VIWAIWKARNNHLFRRRPPNVARTCIKVEAFLWYWTSGLMERANYNV 203
           + W +WK RN   F     ++ R        LWYW  G +  ++ ++
Sbjct: 659 IFWTVWKERNRLAFGDEDLSLQRLKYSFVCNLWYWVRGSLAESHSSI 705


>emb|CAN62820.1| hypothetical protein VITISV_013243 [Vitis vinifera]
          Length = 1528

 Score = 51.2 bits (121), Expect(2) = 3e-07
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
 Frame = -2

Query: 656  TSPRFFYWSASQGRTLTADSLIRRGFDVSPTCSMCSSFNESIMHLFLVCPFALQ*CWTIF 477
            T   F+ W A+ GR LT D L +RG+ +   C +C    E++ HL + C   ++  W I 
Sbjct: 1373 TKVAFYAWEATWGRVLTLDRLQKRGWQLPNCCFLCGCEEETVNHLLIHC-IVVRVLWDIV 1431

Query: 476  MQPNGT--AFPRIA*IDNVEECLVAWPRLRSRGFGAKIWRLVP 354
            +  +G    FP     + V+E L +W          KIW+ +P
Sbjct: 1432 LGLSGVQWVFP-----ETVKEVLTSWRGPFVGKKRKKIWKSIP 1469



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = -3

Query: 343  VIWAIWKARNNHLFRRRPPNVARTCIKVEAFLWYW 239
            + W +WK RN   FR    N+ +        LW W
Sbjct: 1472 IFWTVWKERNRLAFRGGELNIQKLKNSFVCSLWSW 1506


>gb|EEC70571.1| hypothetical protein OsI_01753 [Oryza sativa Indica Group]
          Length = 395

 Score = 49.3 bits (116), Expect(2) = 3e-07
 Identities = 26/68 (38%), Positives = 36/68 (52%)
 Frame = -2

Query: 647 RFFYWSASQGRTLTADSLIRRGFDVSPTCSMCSSFNESIMHLFLVCPFALQ*CWTIFMQP 468
           +FF W  S+ R  TA +L  +    SP C++C +  E+  HLF +CPFA     TI + P
Sbjct: 245 KFFAWLLSKDRLPTAKNLFTKIILQSPQCAICQTGEETSNHLFFMCPFATAFWTTIRVPP 304

Query: 467 NGTAFPRI 444
           N T    I
Sbjct: 305 NVTEVSNI 312



 Score = 31.2 bits (69), Expect(2) = 3e-07
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -3

Query: 337 WAIWKARNNHLFRRRPPNVARTCI--KVEAFLWYWTSGLMERANYNVRDIVMHWHDIIAE 164
           W +W  R++ +FR   P+V R  +  K E+ LW     + +R   NV      W +I + 
Sbjct: 335 WGLWNRRHDVVFRDFQPSVQRLILRCKEESLLWAERLKIKDRLEANV------WCNIFSN 388

Query: 163 ARSS 152
           + SS
Sbjct: 389 SLSS 392


>gb|EEE56168.1| hypothetical protein OsJ_05086 [Oryza sativa Japonica Group]
          Length = 169

 Score = 49.7 bits (117), Expect(2) = 4e-07
 Identities = 25/71 (35%), Positives = 38/71 (53%)
 Frame = -2

Query: 662 TLTSPRFFYWSASQGRTLTADSLIRRGFDVSPTCSMCSSFNESIMHLFLVCPFALQ*CWT 483
           T +  RFF W A++G   TAD+L ++G+     C +C   +ES  HL L C +  Q  W 
Sbjct: 17  TPSKVRFFLWLAAKGHCSTADNLEKKGWPHEEHCVLCQREDESCSHLLLTCDYT-QRVWL 75

Query: 482 IFMQPNGTAFP 450
           +  +  G +FP
Sbjct: 76  LMKKWIGISFP 86



 Score = 30.4 bits (67), Expect(2) = 4e-07
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -3

Query: 352 IYVVIWAIWKARNNHLFRR--RPPNVARTCIKVEAFLWYWTSGLMERAN 212
           + ++ W++WK RN  +F +  R P      IK E  +W  T+G+++  N
Sbjct: 118 VALICWSLWKERNVRIFEQKVRTPEQLVEDIKEEILVWK-TAGVIQPCN 165


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