BLASTX nr result

ID: Coptis21_contig00022108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022108
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACO88904.1| putative resistance protein [Avena strigosa]            75   7e-12
dbj|BAH01414.1| unnamed protein product [Oryza sativa Japonica G...    75   7e-12
ref|NP_001055913.1| Os05g0492200 [Oryza sativa Japonica Group] g...    75   7e-12
gb|AAN03738.1|AF456243_1 NBS-LRR-like protein [Oryza sativa Japo...    75   7e-12
ref|XP_003626880.1| Cc-nbs-lrr resistance protein [Medicago trun...    74   9e-12

>gb|ACO88904.1| putative resistance protein [Avena strigosa]
          Length = 703

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/103 (36%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
 Frame = +3

Query: 6   QFSRLNERLDRIVKNKLVL-PNLSERQSREEPLR--STSSFVDDSEIYGRVDDIYSIVSM 176
           +  ++ ++LDR+VK + ++ PN+     R+E      TSS VDDS ++GR +D   IV M
Sbjct: 36  EIRKVEKKLDRLVKERQIIGPNMINTTDRKEIKERPETSSIVDDSSVFGREEDKEIIVKM 95

Query: 177 LLSETSHQDSHVPLISIVGTAGFGKTTLVQLILKDGQVMNNFE 305
           LL + +   +++ ++ IVG  G GKTTL QL+  D ++ N+F+
Sbjct: 96  LLDQKNSNHANLSILPIVGMGGLGKTTLAQLVYNDTRIKNHFQ 138


>dbj|BAH01414.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1124

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
 Frame = +3

Query: 6   QFSRLNERLDRIVKNK-LVLPNLSERQSREEPLR--STSSFVDDSEIYGRVDDIYSIVSM 176
           Q  ++ E++DR+VK + L+ P++S    REE      TSS +D S ++GR +D  +IV M
Sbjct: 127 QIRKIEEKIDRLVKERQLIGPDMSSTMDREEIKERPKTSSLIDGSSVFGREEDKENIVKM 186

Query: 177 LLSETSHQDSHVPLISIVGTAGFGKTTLVQLILKDGQVMNNFE 305
           LL+  +   ++V ++ IVG  G GKTTL QL+  D +V   F+
Sbjct: 187 LLTPNNSNHANVSVLPIVGMGGLGKTTLTQLVYNDPRVKEYFQ 229


>ref|NP_001055913.1| Os05g0492200 [Oryza sativa Japonica Group]
           gi|113579464|dbj|BAF17827.1| Os05g0492200, partial
           [Oryza sativa Japonica Group]
          Length = 375

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
 Frame = +3

Query: 6   QFSRLNERLDRIVKNK-LVLPNLSERQSREEPLR--STSSFVDDSEIYGRVDDIYSIVSM 176
           Q  ++ E++DR+VK + L+ P++S    REE      TSS +D S ++GR +D  +IV M
Sbjct: 127 QIRKIEEKIDRLVKERQLIGPDMSSTMDREEIKERPKTSSLIDGSSVFGREEDKENIVKM 186

Query: 177 LLSETSHQDSHVPLISIVGTAGFGKTTLVQLILKDGQVMNNFE 305
           LL+  +   ++V ++ IVG  G GKTTL QL+  D +V   F+
Sbjct: 187 LLTPNNSNHANVSVLPIVGMGGLGKTTLTQLVYNDPRVKEYFQ 229


>gb|AAN03738.1|AF456243_1 NBS-LRR-like protein [Oryza sativa Japonica Group]
          Length = 378

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
 Frame = +3

Query: 6   QFSRLNERLDRIVKNK-LVLPNLSERQSREEPLR--STSSFVDDSEIYGRVDDIYSIVSM 176
           Q  ++ E++DR+VK + L+ P++S    REE      TSS +D S ++GR +D  +IV M
Sbjct: 127 QIRKIEEKIDRLVKERQLIGPDMSSTMDREEIKERPKTSSLIDGSSVFGREEDKENIVKM 186

Query: 177 LLSETSHQDSHVPLISIVGTAGFGKTTLVQLILKDGQVMNNFE 305
           LL+  +   ++V ++ IVG  G GKTTL QL+  D +V   F+
Sbjct: 187 LLTPNNSNHANVSVLPIVGMGGLGKTTLTQLVYNDPRVKEYFQ 229


>ref|XP_003626880.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
           gi|355520902|gb|AET01356.1| Cc-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 932

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
 Frame = +3

Query: 6   QFSRLNERLDRIVKNKLVL---PNLSERQSREEPLRSTSSFVDDSEIYGRVDDIYSIVSM 176
           +  ++ ++ + +VK+  VL   PN+   Q      R  SSFV +S+I GR DD   IVSM
Sbjct: 122 EVEKIQKKFNDVVKDMSVLNLNPNVVVVQQTNSVRREKSSFVLESDIIGRDDDKNDIVSM 181

Query: 177 LLSETSHQDSHVPLISIVGTAGFGKTTLVQLILKDGQVMNNFEKLM 314
           L    SH++  V +++IVG  G GKT L QL+  DG+V N FEK M
Sbjct: 182 L--RQSHENQRVSVVAIVGIGGLGKTALSQLVYNDGEVTNYFEKCM 225


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