BLASTX nr result
ID: Coptis21_contig00022097
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00022097 (383 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 64 2e-08 ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 64 2e-08 emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera] 62 5e-08 ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis ... 60 2e-07 ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g... 58 9e-07 >ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus] Length = 458 Score = 63.5 bits (153), Expect = 2e-08 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 2/114 (1%) Frame = +2 Query: 2 CQSWRSSAALPKPPFKSIILPRPIVTGYGSKYSRPHL-CKLVESTIYTI-RPKDQNQAHP 175 C SWRS + P ++ + P + +G S P L + +I+ + P D + Sbjct: 32 CSSWRSVVS---PKRHTLPVRFPFLPNHG--ISDPTWGFNLTKRSIFRVGSPMDHSDG-- 84 Query: 176 PKCWIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEYLL 337 W+IKVEED +I + +PLS+++ P PK FPK LN+L+F + +C+EY+L Sbjct: 85 ---WLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVLNLLNFPVLELCQEYVL 135 >ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus] Length = 404 Score = 63.5 bits (153), Expect = 2e-08 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 2/114 (1%) Frame = +2 Query: 2 CQSWRSSAALPKPPFKSIILPRPIVTGYGSKYSRPHL-CKLVESTIYTI-RPKDQNQAHP 175 C SWRS + P ++ + P + +G S P L + +I+ + P D + Sbjct: 32 CSSWRSVVS---PKRHTLPVRFPFLPNHG--ISDPTWGFNLTKRSIFRVGSPMDHSDG-- 84 Query: 176 PKCWIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEYLL 337 W+IKVEED +I + +PLS+++ P PK FPK LN+L+F + +C+EY+L Sbjct: 85 ---WLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVLNLLNFPVLELCQEYVL 135 >emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera] Length = 986 Score = 62.0 bits (149), Expect = 5e-08 Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 9/119 (7%) Frame = +2 Query: 2 CQSWRSSAALPKP---PFKSIILPRPIVTGYGSKYSRPHL------CKLVESTIYTIRPK 154 C SW SS + P P S+ +P PI + S P L+EST+Y ++P Sbjct: 426 CSSWMSSVSPTFPSKNPLLSLKIPYPIDSIANLNISDPDTPNPRVSFSLIESTLYYLQPL 485 Query: 155 DQNQAHPPKCWIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEY 331 Q + ++K+ E P + LMD LSR + PK FPK LN LDF + + K Y Sbjct: 486 RQTP-DSKEALLVKLXEPKPGKVRLMDTLSRRAIKHLPKNFPKVLNTLDFRVREVGKTY 543 Score = 60.1 bits (144), Expect = 2e-07 Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 9/119 (7%) Frame = +2 Query: 2 CQSWRSSAALPKP---PFKSIILPRPIVTGYGSKYSRPHL------CKLVESTIYTIRPK 154 C SW SS + P P S+ LP PI + P L+EST+Y ++P Sbjct: 36 CSSWMSSVSPTFPSKNPLLSLKLPYPIASNANLNIXDPDTRNPRGSFSLIESTLYYLQPL 95 Query: 155 DQNQAHPPKCWIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEY 331 Q + ++K+EE P LMD LSR + PK FPK LN L+F + + K Y Sbjct: 96 RQTP-DSKEALLVKLEEPKPGKGRLMDTLSRCAIQHLPKNFPKVLNTLNFRVREVGKAY 153 >ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis vinifera] Length = 405 Score = 60.1 bits (144), Expect = 2e-07 Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 9/119 (7%) Frame = +2 Query: 2 CQSWRSSAALPKP---PFKSIILPRPIVTGYGSKYSRPHL------CKLVESTIYTIRPK 154 C SW SS + P P S+ LP PI + P L+EST+Y ++P Sbjct: 36 CSSWMSSVSPTFPRKNPILSLKLPYPIASNANLNICDPDTRNPHGSFSLIESTLYYLQPL 95 Query: 155 DQNQAHPPKCWIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEY 331 Q + ++K+EE P LMD LSR + PK FPK LN L+F + + K Y Sbjct: 96 RQTP-DSKEALLVKLEEPKPGKGRLMDTLSRCAIQHLPKNFPKVLNTLNFRVREVGKAY 153 >ref|XP_002305539.1| f-box family protein [Populus trichocarpa] gi|222848503|gb|EEE86050.1| f-box family protein [Populus trichocarpa] Length = 469 Score = 57.8 bits (138), Expect = 9e-07 Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 4/116 (3%) Frame = +2 Query: 2 CQSWRSSAALPKPPFKSI----ILPRPIVTGYGSKYSRPHLCKLVESTIYTIRPKDQNQA 169 C SWRSS P+PP S ILP ++ +S L + T++ + + + Sbjct: 32 CNSWRSSIP-PEPPCLSSNTFKILPNDGISHTSFGFS------LFKRTVFLVGLPNSHNQ 84 Query: 170 HPPKCWIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEYLL 337 + W+IK+EED P HL DPLSR + P P+ L++++ I + EY+L Sbjct: 85 TDTQGWLIKIEEDVPGKKHLFDPLSRCRSTSLPNNLPRVLDLMNLRIRELGHEYVL 140