BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022097
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi...    64   2e-08
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi...    64   2e-08
emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera]    62   5e-08
ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis ...    60   2e-07
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...    58   9e-07

>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 458

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
 Frame = +2

Query: 2   CQSWRSSAALPKPPFKSIILPRPIVTGYGSKYSRPHL-CKLVESTIYTI-RPKDQNQAHP 175
           C SWRS  +   P   ++ +  P +  +G   S P     L + +I+ +  P D +    
Sbjct: 32  CSSWRSVVS---PKRHTLPVRFPFLPNHG--ISDPTWGFNLTKRSIFRVGSPMDHSDG-- 84

Query: 176 PKCWIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEYLL 337
              W+IKVEED   +I + +PLS+++  P PK FPK LN+L+F +  +C+EY+L
Sbjct: 85  ---WLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVLNLLNFPVLELCQEYVL 135


>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 404

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
 Frame = +2

Query: 2   CQSWRSSAALPKPPFKSIILPRPIVTGYGSKYSRPHL-CKLVESTIYTI-RPKDQNQAHP 175
           C SWRS  +   P   ++ +  P +  +G   S P     L + +I+ +  P D +    
Sbjct: 32  CSSWRSVVS---PKRHTLPVRFPFLPNHG--ISDPTWGFNLTKRSIFRVGSPMDHSDG-- 84

Query: 176 PKCWIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEYLL 337
              W+IKVEED   +I + +PLS+++  P PK FPK LN+L+F +  +C+EY+L
Sbjct: 85  ---WLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVLNLLNFPVLELCQEYVL 135


>emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera]
          Length = 986

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
 Frame = +2

Query: 2   CQSWRSSAALPKP---PFKSIILPRPIVTGYGSKYSRPHL------CKLVESTIYTIRPK 154
           C SW SS +   P   P  S+ +P PI +      S P          L+EST+Y ++P 
Sbjct: 426 CSSWMSSVSPTFPSKNPLLSLKIPYPIDSIANLNISDPDTPNPRVSFSLIESTLYYLQPL 485

Query: 155 DQNQAHPPKCWIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEY 331
            Q      +  ++K+ E  P  + LMD LSR  +   PK FPK LN LDF +  + K Y
Sbjct: 486 RQTP-DSKEALLVKLXEPKPGKVRLMDTLSRRAIKHLPKNFPKVLNTLDFRVREVGKTY 543



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
 Frame = +2

Query: 2   CQSWRSSAALPKP---PFKSIILPRPIVTGYGSKYSRPHL------CKLVESTIYTIRPK 154
           C SW SS +   P   P  S+ LP PI +        P          L+EST+Y ++P 
Sbjct: 36  CSSWMSSVSPTFPSKNPLLSLKLPYPIASNANLNIXDPDTRNPRGSFSLIESTLYYLQPL 95

Query: 155 DQNQAHPPKCWIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEY 331
            Q      +  ++K+EE  P    LMD LSR  +   PK FPK LN L+F +  + K Y
Sbjct: 96  RQTP-DSKEALLVKLEEPKPGKGRLMDTLSRCAIQHLPKNFPKVLNTLNFRVREVGKAY 153


>ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 405

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
 Frame = +2

Query: 2   CQSWRSSAALPKP---PFKSIILPRPIVTGYGSKYSRPHL------CKLVESTIYTIRPK 154
           C SW SS +   P   P  S+ LP PI +        P          L+EST+Y ++P 
Sbjct: 36  CSSWMSSVSPTFPRKNPILSLKLPYPIASNANLNICDPDTRNPHGSFSLIESTLYYLQPL 95

Query: 155 DQNQAHPPKCWIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEY 331
            Q      +  ++K+EE  P    LMD LSR  +   PK FPK LN L+F +  + K Y
Sbjct: 96  RQTP-DSKEALLVKLEEPKPGKGRLMDTLSRCAIQHLPKNFPKVLNTLNFRVREVGKAY 153


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
           gi|222848503|gb|EEE86050.1| f-box family protein
           [Populus trichocarpa]
          Length = 469

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
 Frame = +2

Query: 2   CQSWRSSAALPKPPFKSI----ILPRPIVTGYGSKYSRPHLCKLVESTIYTIRPKDQNQA 169
           C SWRSS   P+PP  S     ILP   ++     +S      L + T++ +   + +  
Sbjct: 32  CNSWRSSIP-PEPPCLSSNTFKILPNDGISHTSFGFS------LFKRTVFLVGLPNSHNQ 84

Query: 170 HPPKCWIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEYLL 337
              + W+IK+EED P   HL DPLSR   +  P   P+ L++++  I  +  EY+L
Sbjct: 85  TDTQGWLIKIEEDVPGKKHLFDPLSRCRSTSLPNNLPRVLDLMNLRIRELGHEYVL 140