BLASTX nr result
ID: Coptis21_contig00022065
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00022065
(1945 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-li... 784 0.0
emb|CBI19949.3| unnamed protein product [Vitis vinifera] 773 0.0
ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|2235... 754 0.0
ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-li... 717 0.0
ref|XP_002307475.1| predicted protein [Populus trichocarpa] gi|2... 715 0.0
>ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-like [Vitis vinifera]
Length = 572
Score = 784 bits (2025), Expect = 0.0
Identities = 399/547 (72%), Positives = 465/547 (85%), Gaps = 3/547 (0%)
Frame = -1
Query: 1840 YFDVYGPQAKAGAVFKSAASDSVLNIQDVQGLVTWVLGEGVNPSWIFIKNKPLIRKVVLL 1661
+FD+YGP+AKA VFK+ +DS LN+QDVQGLVTWVL EG PSWIFIKNKPLI KVV+L
Sbjct: 27 FFDIYGPEAKAEVVFKTPDADSTLNLQDVQGLVTWVLAEGFMPSWIFIKNKPLIPKVVML 86
Query: 1660 YVPGLDAALYMAHTALLAGLKEICGNPRALLALSCVSDGMQTVDALLTSRVKRKRNESES 1481
YVPGLDAALYM+ + +L+GLKE CGNPRA+LALSCVSD MQT+DALLT ++KRKRNE +S
Sbjct: 87 YVPGLDAALYMSQSKILSGLKEFCGNPRAVLALSCVSDRMQTIDALLTCKLKRKRNEVDS 146
Query: 1480 VKKRPDQALEPASTS--SVKPSSTELMKNLPFPILYYTLSAKELEDNGYCTMRPDFVSTG 1307
K+ DQ E S S SS E++K+LPFPI YYTL+AKELEDNGYC +P FVST
Sbjct: 147 ALKKHDQTSEQGGCSGGSNNSSSMEVLKDLPFPITYYTLTAKELEDNGYCHDQPGFVSTL 206
Query: 1306 PAPLGSSTYEMLSLDCEMCITVNGFELTRATLVDIEGQVVLDKLVKPSNAILDYNTRYSG 1127
PAP G YEML+LDCEMC+T GFELTR +LVDI+GQVVLDKLVKPSN I+DYNTRYSG
Sbjct: 207 PAPSGCRLYEMLALDCEMCVTSEGFELTRISLVDIKGQVVLDKLVKPSNRIIDYNTRYSG 266
Query: 1126 ITCEMLNGVNTTLQDIQEEFLKLVHKETILVGHSLENDLLALKLNHNLVIDTAVLYKNPR 947
ITCEMLNGV T L+D+QE+FLKLV+KETILVGHSLENDLLALK++H+LVIDTAVLYK+PR
Sbjct: 267 ITCEMLNGVTTGLKDVQEDFLKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPR 326
Query: 946 GIRYKTALRVLVRKFLSREIQDSDNGHDSIEDARAAMELALLKIRHGPDFGAPPSMSVMR 767
G YKTALRVL R+FLSREIQ+S NGHDSIEDARAAMELALLKIRHGP+FG+PPS MR
Sbjct: 327 GASYKTALRVLTRRFLSREIQESRNGHDSIEDARAAMELALLKIRHGPEFGSPPSF--MR 384
Query: 766 KKLVTILSESGRTCSVIDDVSIVKRYAAGSCNAIPVSSDEEALSKARKEVKNEKVQFIWT 587
KKL+T+L++ G+T S IDD+SIV+RY + + +A PVSSD EALSKA+KEVKN+KV F+WT
Sbjct: 385 KKLLTVLNDYGKTSSFIDDISIVRRYTSEASHAFPVSSDVEALSKAKKEVKNDKVHFVWT 444
Query: 586 HFSELYSYYKRQAEDTEKLNGNVAEMISLLTCNTKSTKKRGIRCSLTSDLKSILTRMDDR 407
FSEL SY+K+QAEDT+KLN +AEMISLLTCN KST +GI+ S+TS+LK ILT +D R
Sbjct: 445 QFSELNSYFKKQAEDTDKLNAKLAEMISLLTCNKKSTTPKGIKFSVTSELKDILTCIDTR 504
Query: 406 IKSLYTALPSNSMLIVCTGQGDTATVQRLRKML-EQKETAMCREMLVKVLEELQAQAEVA 230
I+SLY LP+N+MLI+CTG GDTA V RLRKML EQ ET + RE LVKVLEELQAQAEVA
Sbjct: 505 IRSLYHELPANTMLIICTGHGDTAIVHRLRKMLREQIETTVSREKLVKVLEELQAQAEVA 564
Query: 229 LCFVGVK 209
LCFVGVK
Sbjct: 565 LCFVGVK 571
>emb|CBI19949.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 773 bits (1995), Expect = 0.0
Identities = 394/547 (72%), Positives = 462/547 (84%), Gaps = 3/547 (0%)
Frame = -1
Query: 1840 YFDVYGPQAKAGAVFKSAASDSVLNIQDVQGLVTWVLGEGVNPSWIFIKNKPLIRKVVLL 1661
+FD+YGP+AKA VFK+ +DS LN+QDVQGLVTWVL EG PSWIFIKNKPLI KVV+L
Sbjct: 27 FFDIYGPEAKAEVVFKTPDADSTLNLQDVQGLVTWVLAEGFMPSWIFIKNKPLIPKVVML 86
Query: 1660 YVPGLDAALYMAHTALLAGLKEICGNPRALLALSCVSDGMQTVDALLTSRVKRKRNESES 1481
YVPGLDAALYM+ + +L+GLKE CGNPRA+LALSCVSD MQT+DALLT ++KRKRNE +S
Sbjct: 87 YVPGLDAALYMSQSKILSGLKEFCGNPRAVLALSCVSDRMQTIDALLTCKLKRKRNEVDS 146
Query: 1480 VKKRPDQALEPASTS--SVKPSSTELMKNLPFPILYYTLSAKELEDNGYCTMRPDFVSTG 1307
K+ DQ E S S SS E++K+LPFPI YYTL+AKELEDNGYC +P FVST
Sbjct: 147 ALKKHDQTSEQGGCSGGSNNSSSMEVLKDLPFPITYYTLTAKELEDNGYCHDQPGFVSTL 206
Query: 1306 PAPLGSSTYEMLSLDCEMCITVNGFELTRATLVDIEGQVVLDKLVKPSNAILDYNTRYSG 1127
PAP G YEML+LDCEMC+T GFELTR +LVDI+GQVVLDKLVKPSN I+DYNTRYSG
Sbjct: 207 PAPSGCRLYEMLALDCEMCVTSEGFELTRISLVDIKGQVVLDKLVKPSNRIIDYNTRYSG 266
Query: 1126 ITCEMLNGVNTTLQDIQEEFLKLVHKETILVGHSLENDLLALKLNHNLVIDTAVLYKNPR 947
ITCEMLNGV T L+D+QE+FLKLV+KETILVGHSLENDLLALK++H+LVIDTAVLYK+PR
Sbjct: 267 ITCEMLNGVTTGLKDVQEDFLKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPR 326
Query: 946 GIRYKTALRVLVRKFLSREIQDSDNGHDSIEDARAAMELALLKIRHGPDFGAPPSMSVMR 767
G YKTALRVL R+FLSREIQ+S NGHDSIEDARAAMELAL ++GP+FG+PPS MR
Sbjct: 327 GASYKTALRVLTRRFLSREIQESRNGHDSIEDARAAMELALEVEKYGPEFGSPPSF--MR 384
Query: 766 KKLVTILSESGRTCSVIDDVSIVKRYAAGSCNAIPVSSDEEALSKARKEVKNEKVQFIWT 587
KKL+T+L++ G+T S IDD+SIV+RY + + +A PVSSD EALSKA+KEVKN+KV F+WT
Sbjct: 385 KKLLTVLNDYGKTSSFIDDISIVRRYTSEASHAFPVSSDVEALSKAKKEVKNDKVHFVWT 444
Query: 586 HFSELYSYYKRQAEDTEKLNGNVAEMISLLTCNTKSTKKRGIRCSLTSDLKSILTRMDDR 407
FSEL SY+K+QAEDT+KLN +AEMISLLTCN KST +GI+ S+TS+LK ILT +D R
Sbjct: 445 QFSELNSYFKKQAEDTDKLNAKLAEMISLLTCNKKSTTPKGIKFSVTSELKDILTCIDTR 504
Query: 406 IKSLYTALPSNSMLIVCTGQGDTATVQRLRKML-EQKETAMCREMLVKVLEELQAQAEVA 230
I+SLY LP+N+MLI+CTG GDTA V RLRKML EQ ET + RE LVKVLEELQAQAEVA
Sbjct: 505 IRSLYHELPANTMLIICTGHGDTAIVHRLRKMLREQIETTVSREKLVKVLEELQAQAEVA 564
Query: 229 LCFVGVK 209
LCFVGVK
Sbjct: 565 LCFVGVK 571
>ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|223540467|gb|EEF42034.1|
rnase h, putative [Ricinus communis]
Length = 572
Score = 754 bits (1946), Expect = 0.0
Identities = 377/545 (69%), Positives = 456/545 (83%), Gaps = 1/545 (0%)
Frame = -1
Query: 1840 YFDVYGPQAKAGAVFKSAASDSVLNIQDVQGLVTWVLGEGVNPSWIFIKNKPLIRKVVLL 1661
YFD+YGPQAKA VFK ++ LN++DVQGLVTWVL EG PSW+FIKNKPLI KV +L
Sbjct: 34 YFDIYGPQAKAEIVFKMPEANQTLNLEDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVAML 93
Query: 1660 YVPGLDAALYMAHTALLAGLKEICGNPRALLALSCVSDGMQTVDALLTSRVKRKRNESES 1481
++PGLDA+LY++H+ LLA KE C NPRALLALSCVSD MQTVDALLT ++KRKR+ ++S
Sbjct: 94 FIPGLDASLYLSHSKLLASFKEYCSNPRALLALSCVSDVMQTVDALLTCKMKRKRDRADS 153
Query: 1480 VKKRPDQALEPASTSSVKPSSTELMKNLPFPILYYTLSAKELEDNGYCTMRPDFVSTGPA 1301
++ Q E SS+ ELMK+LPFP YYTL+ K+LE+N Y +P FVST PA
Sbjct: 154 FSRKSMQTSEQGDLSSI-----ELMKDLPFPPTYYTLTTKQLEENDYPISQPGFVSTLPA 208
Query: 1300 PLGSSTYEMLSLDCEMCITVNGFELTRATLVDIEGQVVLDKLVKPSNAILDYNTRYSGIT 1121
P GSS Y+ML+LDCEMCIT GFELTR T+VD++GQVVLDKLVKPSN I+DYNTR+SGIT
Sbjct: 209 PSGSSAYDMLALDCEMCITKEGFELTRVTVVDVKGQVVLDKLVKPSNPIIDYNTRFSGIT 268
Query: 1120 CEMLNGVNTTLQDIQEEFLKLVHKETILVGHSLENDLLALKLNHNLVIDTAVLYKNPRGI 941
CEMLNGV T+L+D+QE+FLKLVHKET+L+GHSLENDL ALK++H LVIDTAVLYK+PRG
Sbjct: 269 CEMLNGVPTSLKDVQEDFLKLVHKETLLIGHSLENDLSALKISHGLVIDTAVLYKHPRGG 328
Query: 940 RYKTALRVLVRKFLSREIQDSDNGHDSIEDARAAMELALLKIRHGPDFGAPPSMSVMRKK 761
YKTALRVL +KFLSREIQ S +GHDSIEDARAAMELALLKI++GPDFG+PPS +R+K
Sbjct: 329 SYKTALRVLAKKFLSREIQQSGDGHDSIEDARAAMELALLKIKNGPDFGSPPSF--VRRK 386
Query: 760 LVTILSESGRTCSVIDDVSIVKRYAAGSCNAIPVSSDEEALSKARKEVKNEKVQFIWTHF 581
L+TILSESG+ SVIDDVSIVKRYA+ S +A PVSSD++ALSKA KEVKN++V F+WT
Sbjct: 387 LLTILSESGKASSVIDDVSIVKRYASESSHAFPVSSDDDALSKALKEVKNDRVHFVWTQL 446
Query: 580 SELYSYYKRQAEDTEKLNGNVAEMISLLTCNTKSTKKRGIRCSLTSDLKSILTRMDDRIK 401
SEL SY+K+QA+D K+N +AEMISLLTC KS +G+RCS+TS+LK IL RMD R++
Sbjct: 447 SELNSYFKKQADDEGKVNAKLAEMISLLTCQKKSANTKGVRCSMTSELKEILIRMDARVR 506
Query: 400 SLYTALPSNSMLIVCTGQGDTATVQRLRKML-EQKETAMCREMLVKVLEELQAQAEVALC 224
LY+ALP+N+MLI+CTG GDTA V+RLRK+L E++ET +CRE +VKVLEELQAQAEVALC
Sbjct: 507 CLYSALPTNTMLIICTGHGDTAIVRRLRKLLTEKQETRICREKIVKVLEELQAQAEVALC 566
Query: 223 FVGVK 209
FVGVK
Sbjct: 567 FVGVK 571
>ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
Length = 567
Score = 717 bits (1851), Expect = 0.0
Identities = 359/545 (65%), Positives = 447/545 (82%), Gaps = 1/545 (0%)
Frame = -1
Query: 1840 YFDVYGPQAKAGAVFKSAASDSVLNIQDVQGLVTWVLGEGVNPSWIFIKNKPLIRKVVLL 1661
++D+YGP+ KA VF S +S LN+ DVQGLVTWVLGEG PSW+FIKNKPLI KVV+L
Sbjct: 29 FYDIYGPEGKADVVFNSPEDNSTLNLSDVQGLVTWVLGEGFMPSWVFIKNKPLIPKVVML 88
Query: 1660 YVPGLDAALYMAHTALLAGLKEICGNPRALLALSCVSDGMQTVDALLTSRVKRKRNESES 1481
YVPGLDAAL+++ + +L LK CG PRA+LALSCVSDGMQT+DALLT ++KRKR+E+ S
Sbjct: 89 YVPGLDAALFLSQSKMLPRLKIFCGKPRAVLALSCVSDGMQTIDALLTCKMKRKRDENSS 148
Query: 1480 VKKRPDQALEPASTSSVKPSSTELMKNLPFPILYYTLSAKELEDNGYCTMRPDFVSTGPA 1301
+ ++ + S S EL K++PFP+ YYTL+ KELE+NGY +P F+ST PA
Sbjct: 149 IMRKSALTSQQDSLSF-----KELTKDIPFPVTYYTLTEKELEENGYSVNKPGFLSTLPA 203
Query: 1300 PLGSSTYEMLSLDCEMCITVNGFELTRATLVDIEGQVVLDKLVKPSNAILDYNTRYSGIT 1121
P GS Y+ML+LDCEMCIT GFEL+R TLVD++GQV++DKLVKPSNAI DYNTRYSGIT
Sbjct: 204 PSGSPFYDMLALDCEMCITSEGFELSRITLVDVKGQVLIDKLVKPSNAITDYNTRYSGIT 263
Query: 1120 CEMLNGVNTTLQDIQEEFLKLVHKETILVGHSLENDLLALKLNHNLVIDTAVLYKNPRGI 941
EML+GV T+L+DIQEEFLKLVHKETILVGHSLENDLLALK++H+LVIDTAVLYK+PRG
Sbjct: 264 SEMLDGVTTSLRDIQEEFLKLVHKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGS 323
Query: 940 RYKTALRVLVRKFLSREIQDSDNGHDSIEDARAAMELALLKIRHGPDFGAPPSMSVMRKK 761
+K ALR L ++FLSREIQ S NGHDSIEDARA MELALLKIR+GP+FG+PPS + RKK
Sbjct: 324 THKNALRFLTKRFLSREIQQSGNGHDSIEDARATMELALLKIRNGPNFGSPPSFT--RKK 381
Query: 760 LVTILSESGRTCSVIDDVSIVKRYAAGSCNAIPVSSDEEALSKARKEVKNEKVQFIWTHF 581
L++ILSESG+T S+IDD+S+VKRYA+ S +AIPV+SD+ AL+KA KEVKN KV FIWT F
Sbjct: 382 LLSILSESGKTSSLIDDISVVKRYASESSHAIPVTSDDVALAKANKEVKNGKVHFIWTQF 441
Query: 580 SELYSYYKRQAEDTEKLNGNVAEMISLLTCNTKSTKKRGIRCSLTSDLKSILTRMDDRIK 401
SEL+SY K+QAED+E+LN +AEM++L TC TK + + +++LK IL RMD RI
Sbjct: 442 SELHSYLKKQAEDSERLNRRLAEMLALQTCQNNFTKGKDFKLKASAELKEILARMDARIH 501
Query: 400 SLYTALPSNSMLIVCTGQGDTATVQRLRKML-EQKETAMCREMLVKVLEELQAQAEVALC 224
+LY +LP+N+M+I+CTG GDTA V+RLRKML EQ E+ +CRE +V++LEE+QA+AEVALC
Sbjct: 502 NLYLSLPTNAMMIICTGHGDTAIVRRLRKMLAEQNESNICREKIVEILEEVQARAEVALC 561
Query: 223 FVGVK 209
FVGVK
Sbjct: 562 FVGVK 566
>ref|XP_002307475.1| predicted protein [Populus trichocarpa] gi|222856924|gb|EEE94471.1|
predicted protein [Populus trichocarpa]
Length = 545
Score = 715 bits (1845), Expect = 0.0
Identities = 374/546 (68%), Positives = 441/546 (80%), Gaps = 2/546 (0%)
Frame = -1
Query: 1840 YFDVYGPQAKAGAVFKSAA-SDSVLNIQDVQGLVTWVLGEGVNPSWIFIKNKPLIRKVVL 1664
++D+YGP A+A V+K+ + S LN+QDVQGLVTWVL EG PSW+FIKNKPLI KVV+
Sbjct: 28 FYDIYGPDARAEVVYKTPPETSSTLNLQDVQGLVTWVLSEGFMPSWVFIKNKPLIPKVVM 87
Query: 1663 LYVPGLDAALYMAHTALLAGLKEICGNPRALLALSCVSDGMQTVDALLTSRVKRKRNESE 1484
LYVPGLDAALY++ + LLAG KE CGNP LL+LSCVSDGMQTVDALLT ++KRKRNE +
Sbjct: 88 LYVPGLDAALYISQSKLLAGFKECCGNPMPLLSLSCVSDGMQTVDALLTCKMKRKRNEVD 147
Query: 1483 SVKKRPDQALEPASTSSVKPSSTELMKNLPFPILYYTLSAKELEDNGYCTMRPDFVSTGP 1304
SV ++ SV S LMK+LPFP+ YYTL+AKELEDNGYC +P VS
Sbjct: 148 SVSRK-----------SVLTSEQGLMKDLPFPLSYYTLTAKELEDNGYCINQP--VS--- 191
Query: 1303 APLGSSTYEMLSLDCEMCITVNGFELTRATLVDIEGQVVLDKLVKPSNAILDYNTRYSGI 1124
AP GS Y++L+LDCEMCIT GFELTR TLVDIEGQVVLDKLVKPSN I+DYNTR+SGI
Sbjct: 192 APSGSGPYDILALDCEMCITNEGFELTRVTLVDIEGQVVLDKLVKPSNDIVDYNTRFSGI 251
Query: 1123 TCEMLNGVNTTLQDIQEEFLKLVHKETILVGHSLENDLLALKLNHNLVIDTAVLYKNPRG 944
T EMLNGV T+L+DIQE+FLKLV+KETILVGHSLENDLLALK++H +VIDTA+LYK+PRG
Sbjct: 252 TYEMLNGVTTSLKDIQEDFLKLVYKETILVGHSLENDLLALKISHEVVIDTALLYKHPRG 311
Query: 943 IRYKTALRVLVRKFLSREIQDSDNGHDSIEDARAAMELALLKIRHGPDFGAPPSMSVMRK 764
YKTALRVL ++FLS+EIQ S GHDSIEDARA MELALLKIR+G K
Sbjct: 312 GNYKTALRVLSKRFLSQEIQQSGAGHDSIEDARATMELALLKIRNG-------------K 358
Query: 763 KLVTILSESGRTCSVIDDVSIVKRYAAGSCNAIPVSSDEEALSKARKEVKNEKVQFIWTH 584
KL+T+LSE G+T S IDD+SIVKRY +GS ++ PVSSDEEAL KARKEVKN+ V F+WT
Sbjct: 359 KLLTVLSECGKTSSFIDDISIVKRYTSGSSHSFPVSSDEEALLKARKEVKNDGVHFVWTQ 418
Query: 583 FSELYSYYKRQAEDTEKLNGNVAEMISLLTCNTKSTKKRGIRCSLTSDLKSILTRMDDRI 404
FSEL SY+K+QAED KLNG +AEMISLLTC KST +G++CS+T LK ILT+MD R+
Sbjct: 419 FSELNSYFKKQAEDEGKLNGKLAEMISLLTCEKKSTNTKGMKCSMTPQLKEILTQMDARV 478
Query: 403 KSLYTALPSNSMLIVCTGQGDTATVQRLRKML-EQKETAMCREMLVKVLEELQAQAEVAL 227
+ LY+ LP+N+MLI+CTG GDTA V R+RKML EQKETA+ RE +VKVLEELQAQAEVAL
Sbjct: 479 RCLYSTLPTNTMLIICTGHGDTAIVNRVRKMLAEQKETAISREKIVKVLEELQAQAEVAL 538
Query: 226 CFVGVK 209
CFVGVK
Sbjct: 539 CFVGVK 544