BLASTX nr result

ID: Coptis21_contig00022040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022040
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4...   106   2e-21
emb|CBI33734.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4...   103   1e-20
gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]      102   4e-20
ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20

>ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 809

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/76 (65%), Positives = 58/76 (76%)
 Frame = -3

Query: 228 AEQDENYTEAKCIDHMVCLVTVMHDLLVKTKYTESTTTVPIPSDFCCPLSLELMRDPVIV 49
           AEQ E   EA+ ID M+ L T MHD  + TK ++S   +PIP+DFCCPLSLELM DPVIV
Sbjct: 196 AEQAEKTEEAEYIDQMITLATQMHDRFIITKQSQSCNPIPIPADFCCPLSLELMTDPVIV 255

Query: 48  ASGQTYERTYIRKWLD 1
           ASGQTYER +IRKWLD
Sbjct: 256 ASGQTYERAFIRKWLD 271


>emb|CBI33734.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/76 (65%), Positives = 58/76 (76%)
 Frame = -3

Query: 228 AEQDENYTEAKCIDHMVCLVTVMHDLLVKTKYTESTTTVPIPSDFCCPLSLELMRDPVIV 49
           AEQ E   EA+ ID M+ L T MHD  + TK ++S   +PIP+DFCCPLSLELM DPVIV
Sbjct: 196 AEQAEKTEEAEYIDQMITLATQMHDRFIITKQSQSCNPIPIPADFCCPLSLELMTDPVIV 255

Query: 48  ASGQTYERTYIRKWLD 1
           ASGQTYER +IRKWLD
Sbjct: 256 ASGQTYERAFIRKWLD 271


>ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 838

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/76 (63%), Positives = 58/76 (76%)
 Frame = -3

Query: 228 AEQDENYTEAKCIDHMVCLVTVMHDLLVKTKYTESTTTVPIPSDFCCPLSLELMRDPVIV 49
           AEQ E   EA+ ID M+ +VT MH+ LV  K  +S + VPIP+DFCCPLSLELM DPVIV
Sbjct: 196 AEQTEKTAEAELIDQMIAVVTHMHERLVMLKQAQSISPVPIPADFCCPLSLELMTDPVIV 255

Query: 48  ASGQTYERTYIRKWLD 1
           ASGQTYER +I+ W+D
Sbjct: 256 ASGQTYERAFIKNWID 271


>gb|AAO61490.1| arm repeat-containing protein [Nicotiana tabacum]
          Length = 790

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/76 (63%), Positives = 57/76 (75%)
 Frame = -3

Query: 228 AEQDENYTEAKCIDHMVCLVTVMHDLLVKTKYTESTTTVPIPSDFCCPLSLELMRDPVIV 49
           AEQ E     + I+ M+ LV+ MHD  V TK ++S T VPIP DFCCPLSLELM DPVIV
Sbjct: 196 AEQAEKSEVVEYIEQMITLVSHMHDCFVTTKQSQSCTAVPIPPDFCCPLSLELMTDPVIV 255

Query: 48  ASGQTYERTYIRKWLD 1
           ASGQTYER +IR+W+D
Sbjct: 256 ASGQTYERAFIRRWID 271


>ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|222831845|gb|EEE70322.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score =  101 bits (252), Expect = 6e-20
 Identities = 47/76 (61%), Positives = 60/76 (78%)
 Frame = -3

Query: 228 AEQDENYTEAKCIDHMVCLVTVMHDLLVKTKYTESTTTVPIPSDFCCPLSLELMRDPVIV 49
           AEQ E   EA+ ID M+ LVT +H+ LV  K ++S++ VPIP+DFCCPLSLELM DPVIV
Sbjct: 196 AEQAEKTAEAEFIDQMIALVTHIHERLVLIKQSQSSSPVPIPADFCCPLSLELMTDPVIV 255

Query: 48  ASGQTYERTYIRKWLD 1
           ASGQTYER +I+ W++
Sbjct: 256 ASGQTYERAFIKNWIE 271


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