BLASTX nr result

ID: Coptis21_contig00022039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022039
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4...    96   3e-18
emb|CBI33734.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4...    92   3e-17
ref|XP_004149702.1| PREDICTED: U-box domain-containing protein 4...    91   8e-17

>ref|XP_002332232.1| predicted protein [Populus trichocarpa] gi|222831845|gb|EEE70322.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/98 (54%), Positives = 71/98 (72%)
 Frame = +2

Query: 2   VMQVEPLIARIQASCMDVFQLLNSLHQYLPDDLNLISVEHSIQKLQCYGYDQTSSVIKEA 181
           V+Q+E L  +I+   +D FQLL S HQ LPD+L+  S+E+ IQK++   Y+QTSS+IKEA
Sbjct: 93  VLQIESLTLKIRNLGLDSFQLLKSSHQQLPDELSSSSLENCIQKIKHSVYEQTSSIIKEA 152

Query: 182 MQAEVENSTPSSESMVKIAVSLSLTTNQEFLMEAVALE 295
           +  + E   PSSE +VKIA SL L +NQE L+EAVALE
Sbjct: 153 ISGQEEGVGPSSEILVKIADSLCLRSNQEILIEAVALE 190


>ref|XP_002283956.2| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 809

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/98 (48%), Positives = 76/98 (77%)
 Frame = +2

Query: 2   VMQVEPLIARIQASCMDVFQLLNSLHQYLPDDLNLISVEHSIQKLQCYGYDQTSSVIKEA 181
           V+Q+E  I++I+ S +++FQ L S HQ LPD+L+  S+E  IQK++  GY+QTS++++EA
Sbjct: 93  VLQIELSISKIRTSGLEIFQQLKSSHQCLPDELSSASLETCIQKVKHMGYEQTSTILQEA 152

Query: 182 MQAEVENSTPSSESMVKIAVSLSLTTNQEFLMEAVALE 295
           ++ +V+ +  SSES++K+A  LSL +NQE L+EAVALE
Sbjct: 153 IRNQVQGAGSSSESLMKLADCLSLRSNQELLIEAVALE 190


>emb|CBI33734.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/98 (48%), Positives = 76/98 (77%)
 Frame = +2

Query: 2   VMQVEPLIARIQASCMDVFQLLNSLHQYLPDDLNLISVEHSIQKLQCYGYDQTSSVIKEA 181
           V+Q+E  I++I+ S +++FQ L S HQ LPD+L+  S+E  IQK++  GY+QTS++++EA
Sbjct: 93  VLQIELSISKIRTSGLEIFQQLKSSHQCLPDELSSASLETCIQKVKHMGYEQTSTILQEA 152

Query: 182 MQAEVENSTPSSESMVKIAVSLSLTTNQEFLMEAVALE 295
           ++ +V+ +  SSES++K+A  LSL +NQE L+EAVALE
Sbjct: 153 IRNQVQGAGSSSESLMKLADCLSLRSNQELLIEAVALE 190


>ref|XP_003538329.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 838

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/98 (51%), Positives = 69/98 (70%)
 Frame = +2

Query: 2   VMQVEPLIARIQASCMDVFQLLNSLHQYLPDDLNLISVEHSIQKLQCYGYDQTSSVIKEA 181
           VMQVEPLI+RI+ S +++F  L      LPD+L+   ++H  QKL+  G+++TS VI+EA
Sbjct: 93  VMQVEPLISRIRTSGLNIFLQLKDSQHCLPDELSSEHLQHCSQKLKLLGHEETSPVIQEA 152

Query: 182 MQAEVENSTPSSESMVKIAVSLSLTTNQEFLMEAVALE 295
           +   +EN  PSSE + KIA SL L +NQE L+EAVALE
Sbjct: 153 ITEHLENVGPSSELLSKIADSLGLRSNQEVLIEAVALE 190


>ref|XP_004149702.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
           gi|449524872|ref|XP_004169445.1| PREDICTED: U-box
           domain-containing protein 4-like [Cucumis sativus]
          Length = 841

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 47/98 (47%), Positives = 73/98 (74%)
 Frame = +2

Query: 2   VMQVEPLIARIQASCMDVFQLLNSLHQYLPDDLNLISVEHSIQKLQCYGYDQTSSVIKEA 181
           V+Q E LI++I    +D+FQLL S ++ LP++L+  S+EH +QK++  G ++ SSVIK+A
Sbjct: 93  VLQSETLISKIGKFSLDIFQLLQSSNENLPEELSSKSLEHCVQKIKNIGKEEISSVIKDA 152

Query: 182 MQAEVENSTPSSESMVKIAVSLSLTTNQEFLMEAVALE 295
           ++ +V+   PSS+ +VK+A SLSL +NQ  L+EAVALE
Sbjct: 153 IRNQVDGIAPSSDVLVKLADSLSLRSNQAILIEAVALE 190


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